RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 BCORL1Q5H9F3 1711 aa18.37■□□□□ 0.53
TPM1-209ENST00000558072 KIF3BO15066 747 aa18.36■□□□□ 0.53
TPM1-209ENST00000558072 CEP152O94986 1710 aa18.36■□□□□ 0.53
TPM1-209ENST00000558072 AGLP35573 1532 aa18.36■□□□□ 0.53
TPM1-209ENST00000558072 DEPDC5O75140 1603 aa18.35■□□□□ 0.53
TPM1-209ENST00000558072 UNC13BO14795 1591 aa18.35■□□□□ 0.53
TPM1-209ENST00000558072 MADDQ8WXG6 1647 aa18.32■□□□□ 0.52
TPM1-209ENST00000558072 GGT6Q6P531 493 aa18.32■□□□□ 0.52
TPM1-209ENST00000558072 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.32■□□□□ 0.527e-7■■□□□ 12.3
TPM1-209ENST00000558072 PRDM15P57071 1507 aaPredicted RBP18.32■□□□□ 0.52
TPM1-209ENST00000558072 CLTCQ00610 1675 aaKnown RBP18.31■□□□□ 0.52
TPM1-209ENST00000558072 FER1L4A9Z1Z3 1794 aa18.3■□□□□ 0.52
TPM1-209ENST00000558072 RIMS1Q86UR5 1692 aaKnown RBP18.29■□□□□ 0.52
TPM1-209ENST00000558072 ADAMTSL3P82987 1691 aa18.28■□□□□ 0.52
TPM1-209ENST00000558072 TRIM52Q96A61 297 aa18.28■□□□□ 0.52
TPM1-209ENST00000558072 ABCC3O15438 1527 aa18.27■□□□□ 0.51
TPM1-209ENST00000558072 KANK1Q14678 1352 aa18.27■□□□□ 0.51
TPM1-209ENST00000558072 VWDEQ8N2E2 1590 aa18.26■□□□□ 0.51
TPM1-209ENST00000558072 PPP6R1Q9UPN7 881 aa18.26■□□□□ 0.51
TPM1-209ENST00000558072 IQGAP3Q86VI3 1631 aa18.26■□□□□ 0.51
TPM1-209ENST00000558072 PZPP20742 1482 aa18.26■□□□□ 0.51
TPM1-209ENST00000558072 CAMSAP1Q5T5Y3 1602 aa18.25■□□□□ 0.51
TPM1-209ENST00000558072 CLSPNQ9HAW4 1339 aa18.24■□□□□ 0.51
TPM1-209ENST00000558072 KDM5DQ9BY66 1539 aa18.24■□□□□ 0.51
TPM1-209ENST00000558072 FAM135AQ9P2D6 1515 aa18.24■□□□□ 0.51
TPM1-209ENST00000558072 PLPPR3Q6T4P5 718 aa18.23■□□□□ 0.51
TPM1-209ENST00000558072 NUP155O75694 1391 aa18.22■□□□□ 0.51
TPM1-209ENST00000558072 ZC3H13Q5T200 1668 aaKnown RBP18.22■□□□□ 0.51
TPM1-209ENST00000558072 CCER1Q8TC90 406 aaPredicted RBP18.21■□□□□ 0.51
TPM1-209ENST00000558072 E9PCH4 1651 aa18.2■□□□□ 0.5
TPM1-209ENST00000558072 TET3O43151 1660 aa18.2■□□□□ 0.5
TPM1-209ENST00000558072 C3P01024 1663 aa18.19■□□□□ 0.5
TPM1-209ENST00000558072 AEBP2Q6ZN18 517 aaPredicted RBP18.19■□□□□ 0.5
TPM1-209ENST00000558072 SLC4A1APQ9BWU0 796 aaKnown RBP18.19■□□□□ 0.5
TPM1-209ENST00000558072 EFCAB6Q5THR3 1501 aa18.18■□□□□ 0.5
TPM1-209ENST00000558072 KDM4FA0A1W2PPD8 638 aa18.18■□□□□ 0.5
TPM1-209ENST00000558072 MPHOSPH9Q99550 1183 aa18.18■□□□□ 0.5
TPM1-209ENST00000558072 FOXD1Q16676 465 aa18.17■□□□□ 0.5
TPM1-209ENST00000558072 MROH2AA6NES4 1674 aa18.16■□□□□ 0.5
TPM1-209ENST00000558072 CEBPAP49715 358 aaPredicted RBP18.16■□□□□ 0.5
TPM1-209ENST00000558072 LMTK2Q8IWU2 1503 aa18.16■□□□□ 0.5
TPM1-209ENST00000558072 WASHC2CQ9Y4E1 1318 aa18.16■□□□□ 0.5
TPM1-209ENST00000558072 DHX57Q6P158 1386 aaKnown RBP18.16■□□□□ 0.5
TPM1-209ENST00000558072 CFAP65Q6ZU64 1925 aaKnown RBP18.15■□□□□ 0.5
TPM1-209ENST00000558072 ESF1Q9H501 851 aaKnown RBP18.13■□□□□ 0.49
TPM1-209ENST00000558072 NPATQ14207 1427 aa18.13■□□□□ 0.49
TPM1-209ENST00000558072 PREX1Q8TCU6 1659 aa18.12■□□□□ 0.49
TPM1-209ENST00000558072 ZEB1P37275 1124 aaPredicted RBP18.11■□□□□ 0.49
TPM1-209ENST00000558072 PTPRMP28827 1452 aa18.11■□□□□ 0.49
TPM1-209ENST00000558072 UGGT1Q9NYU2 1555 aa18.11■□□□□ 0.49
TPM1-209ENST00000558072 FBXO31Q5XUX0 539 aaPredicted RBP18.1■□□□□ 0.49
TPM1-209ENST00000558072 SYNMO15061 1565 aa18.09■□□□□ 0.49
TPM1-209ENST00000558072 ZMYM3Q14202 1370 aa18.09■□□□□ 0.49
TPM1-209ENST00000558072 PKD2Q13563 968 aa18.09■□□□□ 0.49
TPM1-209ENST00000558072 SPHKAPQ2M3C7 1700 aa18.09■□□□□ 0.49
TPM1-209ENST00000558072 CNTLNQ9NXG0 1405 aa18.08■□□□□ 0.49
TPM1-209ENST00000558072 ERVK-7P63135 1459 aa18.07■□□□□ 0.48
TPM1-209ENST00000558072 RPRD2Q5VT52 1461 aaKnown RBP18.06■□□□□ 0.48
TPM1-209ENST00000558072 CLTCL1P53675 1640 aa18.05■□□□□ 0.48
TPM1-209ENST00000558072 SPATA31D1Q6ZQQ2 1576 aa18.04■□□□□ 0.48
TPM1-209ENST00000558072 PLA2R1Q13018 1463 aa18.04■□□□□ 0.48
TPM1-209ENST00000558072 ARHGAP31Q2M1Z3 1444 aa18.04■□□□□ 0.48
TPM1-209ENST00000558072 MYO3AQ8NEV4 1616 aa18.03■□□□□ 0.48
TPM1-209ENST00000558072 TIMELESSQ9UNS1 1208 aa18.03■□□□□ 0.48
TPM1-209ENST00000558072 NOS1P29475 1434 aa18.01■□□□□ 0.47
TPM1-209ENST00000558072 TRPM2O94759 1503 aa18■□□□□ 0.47
TPM1-209ENST00000558072 TNRQ92752 1358 aa17.99■□□□□ 0.47
TPM1-209ENST00000558072 ANKRD30BQ9BXX2 1392 aa17.99■□□□□ 0.47
TPM1-209ENST00000558072 PIK3C2BO00750 1634 aa17.98■□□□□ 0.47
TPM1-209ENST00000558072 MYO5BQ9ULV0 1848 aa17.98■□□□□ 0.47
TPM1-209ENST00000558072 PTPRTO14522 1441 aa17.98■□□□□ 0.47
TPM1-209ENST00000558072 CCDC144AA2RUR9 1427 aa17.95■□□□□ 0.46
TPM1-209ENST00000558072 SIN3AQ96ST3 1273 aa17.94■□□□□ 0.46
TPM1-209ENST00000558072 SLC52A1Q9NWF4 448 aa17.93■□□□□ 0.46
TPM1-209ENST00000558072 CEP170BQ9Y4F5 1589 aaPredicted RBP17.92■□□□□ 0.46
TPM1-209ENST00000558072 ZNF142P52746 1687 aaPredicted RBP17.92■□□□□ 0.46
TPM1-209ENST00000558072 UBR1Q8IWV7 1749 aa17.91■□□□□ 0.46
TPM1-209ENST00000558072 ADGRB3O60242 1522 aa17.9■□□□□ 0.46
TPM1-209ENST00000558072 TMEM131LA2VDJ0 1609 aa17.9■□□□□ 0.46
TPM1-209ENST00000558072 TONSLQ96HA7 1378 aa17.9■□□□□ 0.46
TPM1-209ENST00000558072 KIF1BO60333 1816 aa17.89■□□□□ 0.45
TPM1-209ENST00000558072 CHGAP10645 457 aaKnown RBP17.89■□□□□ 0.45
TPM1-209ENST00000558072 NEUROD1Q13562 356 aa17.89■□□□□ 0.45
TPM1-209ENST00000558072 IDI1Q13907 227 aa17.89■□□□□ 0.45
TPM1-209ENST00000558072 STAC3Q96MF2 364 aa17.89■□□□□ 0.45
TPM1-209ENST00000558072 A2ML1A8K2U0 1454 aa17.87■□□□□ 0.45
TPM1-209ENST00000558072 UHRF1BP1Q6BDS2 1440 aa17.86■□□□□ 0.45
TPM1-209ENST00000558072 LMTK3Q96Q04 1460 aa17.86■□□□□ 0.45
TPM1-209ENST00000558072 NLRP1Q9C000 1473 aa17.86■□□□□ 0.45
TPM1-209ENST00000558072 SENP3Q9H4L4 574 aaPredicted RBP17.85■□□□□ 0.45
TPM1-209ENST00000558072 NEURL4Q96JN8 1562 aa17.84■□□□□ 0.45
TPM1-209ENST00000558072 HSPA2P54652 639 aa17.83■□□□□ 0.44
TPM1-209ENST00000558072 SPATA31E1Q6ZUB1 1445 aa17.82■□□□□ 0.44
TPM1-209ENST00000558072 NUTM2DQ5VT03 806 aaPredicted RBP17.82■□□□□ 0.44
TPM1-209ENST00000558072 IFT172Q9UG01 1749 aa17.81■□□□□ 0.44
TPM1-209ENST00000558072 RGL3Q3MIN7 710 aa17.81■□□□□ 0.44
TPM1-209ENST00000558072 RPGRIP1LQ68CZ1 1315 aa17.8■□□□□ 0.44
TPM1-209ENST00000558072 NEXMIFQ5QGS0 1516 aa17.8■□□□□ 0.44
TPM1-209ENST00000558072 PPLO60437 1756 aa17.79■□□□□ 0.44
TPM1-209ENST00000558072 SETD1BQ9UPS6 1966 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms