RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 KRTAP3-3Q9BYR6 98 aa10.4□□□□□ -0.74
HNRNPC-233ENST00000557768 KRTAP3-2Q9BYR7 98 aa10.4□□□□□ -0.74
HNRNPC-233ENST00000557768 FOSBP53539 338 aa10.38□□□□□ -0.75
HNRNPC-233ENST00000557768 AXIN2Q9Y2T1 843 aa10.38□□□□□ -0.75
HNRNPC-233ENST00000557768 WIZO95785 1651 aa10.37□□□□□ -0.75
HNRNPC-233ENST00000557768 PDS5BQ9NTI5 1447 aa10.36□□□□□ -0.75
HNRNPC-233ENST00000557768 SPDYE16A6NNV3 312 aaPredicted RBP10.36□□□□□ -0.75
HNRNPC-233ENST00000557768 PDIA6Q15084 440 aa10.36□□□□□ -0.75
HNRNPC-233ENST00000557768 DDX12PQ92771 950 aa10.36□□□□□ -0.75
HNRNPC-233ENST00000557768 JPH4Q96JJ6 628 aa10.36□□□□□ -0.75
HNRNPC-233ENST00000557768 ARIH1Q9Y4X5 557 aaPredicted RBP10.36□□□□□ -0.75
HNRNPC-233ENST00000557768 POTEEQ6S8J3 1075 aa10.34□□□□□ -0.75
HNRNPC-233ENST00000557768 P3H3Q8IVL6 736 aa10.34□□□□□ -0.75
HNRNPC-233ENST00000557768 PCDHGA10Q9Y5H3 936 aa10.34□□□□□ -0.75
HNRNPC-233ENST00000557768 PBX2P40425 430 aa10.33□□□□□ -0.76
HNRNPC-233ENST00000557768 ARHGEF1Q92888 912 aaKnown RBP10.33□□□□□ -0.76
HNRNPC-233ENST00000557768 ZDHHC16Q969W1 377 aa10.33□□□□□ -0.76
HNRNPC-233ENST00000557768 ARHGAP33O14559 1287 aa10.32□□□□□ -0.76
HNRNPC-233ENST00000557768 PSEN2P49810 448 aa10.32□□□□□ -0.76
HNRNPC-233ENST00000557768 ANKRD13DQ6ZTN6 518 aa10.32□□□□□ -0.76
HNRNPC-233ENST00000557768 KCNK17Q96T54 332 aa10.32□□□□□ -0.76
HNRNPC-233ENST00000557768 PLSCR2Q9NRY7 297 aa10.32□□□□□ -0.76
HNRNPC-233ENST00000557768 PHF14O94880 888 aa10.31□□□□□ -0.76
HNRNPC-233ENST00000557768 ADAM33Q9BZ11 813 aa10.31□□□□□ -0.76
HNRNPC-233ENST00000557768 MRC2Q9UBG0 1479 aa10.3□□□□□ -0.76
HNRNPC-233ENST00000557768 CADPSQ9ULU8 1353 aa10.3□□□□□ -0.76
HNRNPC-233ENST00000557768 GRXCR2A6NFK2 248 aa10.3□□□□□ -0.76
HNRNPC-233ENST00000557768 PTGER2P43116 358 aa10.3□□□□□ -0.76
HNRNPC-233ENST00000557768 LSM11P83369 360 aaKnown RBP eCLIP10.3□□□□□ -0.76
HNRNPC-233ENST00000557768 TYW1BQ6NUM6 668 aa10.3□□□□□ -0.76
HNRNPC-233ENST00000557768 WDR62O43379 1518 aa10.29□□□□□ -0.76
HNRNPC-233ENST00000557768 RBM33Q96EV2 1170 aaKnown RBP10.29□□□□□ -0.76
HNRNPC-233ENST00000557768 KCNH8Q96L42 1107 aa10.29□□□□□ -0.76
HNRNPC-233ENST00000557768 BCL2L12Q9HB09 334 aa10.29□□□□□ -0.76
HNRNPC-233ENST00000557768 NBR1Q14596 966 aa10.28□□□□□ -0.76
HNRNPC-233ENST00000557768 TPRNQ4KMQ1 711 aa10.28□□□□□ -0.76
HNRNPC-233ENST00000557768 EPAS1Q99814 870 aa10.28□□□□□ -0.76
HNRNPC-233ENST00000557768 PTPREP23469 700 aa10.27□□□□□ -0.77
HNRNPC-233ENST00000557768 DMRTA1Q5VZB9 504 aa10.27□□□□□ -0.77
HNRNPC-233ENST00000557768 FBXW7Q969H0 707 aa10.27□□□□□ -0.77
HNRNPC-233ENST00000557768 SPNS2Q8IVW8 549 aa10.26□□□□□ -0.77
HNRNPC-233ENST00000557768 CEP164Q9UPV0 1460 aa10.24□□□□□ -0.77
HNRNPC-233ENST00000557768 MAP3K7O43318 606 aa10.23□□□□□ -0.77
HNRNPC-233ENST00000557768 MLLT3P42568 568 aaPredicted RBP10.22□□□□□ -0.77
HNRNPC-233ENST00000557768 FANCD2Q9BXW9 1451 aa10.22□□□□□ -0.77
HNRNPC-233ENST00000557768 PRDM2Q13029 1718 aa10.21□□□□□ -0.77
HNRNPC-233ENST00000557768 SEMA3EO15041 775 aa10.21□□□□□ -0.77
HNRNPC-233ENST00000557768 C6orf132Q5T0Z8 1188 aa10.21□□□□□ -0.77
HNRNPC-233ENST00000557768 EN1Q05925 392 aaPredicted RBP10.2□□□□□ -0.78
HNRNPC-233ENST00000557768 ADGRD1Q6QNK2 874 aa10.2□□□□□ -0.78
HNRNPC-233ENST00000557768 COL9A1P20849 921 aa10.19□□□□□ -0.78
HNRNPC-233ENST00000557768 OSBPP22059 807 aa10.19□□□□□ -0.78
HNRNPC-233ENST00000557768 PRIM1P49642 420 aaKnown RBP10.19□□□□□ -0.78
HNRNPC-233ENST00000557768 TSR1Q2NL82 804 aaKnown RBP10.19□□□□□ -0.78
HNRNPC-233ENST00000557768 TOP2AP11388 1531 aaKnown RBP10.17□□□□□ -0.78
HNRNPC-233ENST00000557768 CFTRP13569 1480 aa10.17□□□□□ -0.78
HNRNPC-233ENST00000557768 PPP1R3GB7ZBB8 358 aa10.17□□□□□ -0.78
HNRNPC-233ENST00000557768 TK2O00142 265 aa10.17□□□□□ -0.78
HNRNPC-233ENST00000557768 MMRN1Q13201 1228 aa10.17□□□□□ -0.78
HNRNPC-233ENST00000557768 ZBED2Q9BTP6 218 aa10.17□□□□□ -0.78
HNRNPC-233ENST00000557768 VPS9D1Q9Y2B5 631 aa10.16□□□□□ -0.78
HNRNPC-233ENST00000557768 URB2Q14146 1524 aaKnown RBP10.16□□□□□ -0.78
HNRNPC-233ENST00000557768 RSF1Q96T23 1441 aaPredicted RBP10.16□□□□□ -0.78
HNRNPC-233ENST00000557768 PROX2Q3B8N5 592 aa10.15□□□□□ -0.78
HNRNPC-233ENST00000557768 MYT1LQ9UL68 1186 aa10.15□□□□□ -0.78
HNRNPC-233ENST00000557768 STAC3Q96MF2 364 aa10.14□□□□□ -0.79
HNRNPC-233ENST00000557768 SLC4A5Q9BY07 1137 aa10.13□□□□□ -0.79
HNRNPC-233ENST00000557768 CDHR5Q9HBB8 845 aa10.13□□□□□ -0.79
HNRNPC-233ENST00000557768 TESPA1A2RU30 521 aaPredicted RBP10.12□□□□□ -0.79
HNRNPC-233ENST00000557768 HRO43593 1189 aa10.11□□□□□ -0.79
HNRNPC-233ENST00000557768 RNF166Q96A37 237 aaPredicted RBP10.09□□□□□ -0.79
HNRNPC-233ENST00000557768 RIMBP3CA6NJZ7 1639 aa10.08□□□□□ -0.8
HNRNPC-233ENST00000557768 RIMBP3BA6NNM3 1639 aa10.08□□□□□ -0.8
HNRNPC-233ENST00000557768 RIMBP3Q9UFD9 1639 aa10.08□□□□□ -0.8
HNRNPC-233ENST00000557768 NUTM2FA1L443 756 aa10.08□□□□□ -0.8
HNRNPC-233ENST00000557768 SMYD5Q6GMV2 418 aa10.08□□□□□ -0.8
HNRNPC-233ENST00000557768 KIAA1468Q9P260 1216 aa10.07□□□□□ -0.8
HNRNPC-233ENST00000557768 TRIM6-TRIM34B2RNG4 842 aa10.06□□□□□ -0.8
HNRNPC-233ENST00000557768 CERKQ8TCT0 537 aa10.06□□□□□ -0.8
HNRNPC-233ENST00000557768 RABGEF1Q9UJ41 708 aa10.06□□□□□ -0.8
HNRNPC-233ENST00000557768 ZNF608Q9ULD9 1512 aaPredicted RBP10.06□□□□□ -0.8
HNRNPC-233ENST00000557768 CCDC88BA6NC98 1476 aa10.05□□□□□ -0.8
HNRNPC-233ENST00000557768 BHMG1C9JSJ3 638 aaPredicted RBP10.05□□□□□ -0.8
HNRNPC-233ENST00000557768 RBM26Q5T8P6 1007 aaKnown RBP10.05□□□□□ -0.8
HNRNPC-233ENST00000557768 MRPL50Q8N5N7 158 aaKnown RBP10.05□□□□□ -0.8
HNRNPC-233ENST00000557768 CDCA7LQ96GN5 454 aa10.05□□□□□ -0.8
HNRNPC-233ENST00000557768 NBPF3Q9H094 633 aa10.05□□□□□ -0.8
HNRNPC-233ENST00000557768 GOLGA8CPA6NN73 597 aa10.04□□□□□ -0.8
HNRNPC-233ENST00000557768 PRSS12P56730 875 aa10.04□□□□□ -0.8
HNRNPC-233ENST00000557768 NPDC1Q9NQX5 325 aaPredicted RBP10.04□□□□□ -0.8
HNRNPC-233ENST00000557768 TSKSQ9UJT2 592 aa10.04□□□□□ -0.8
HNRNPC-233ENST00000557768 CHD1O14646 1710 aa10.03□□□□□ -0.8
HNRNPC-233ENST00000557768 EIF4G3O43432 1585 aaKnown RBP10.03□□□□□ -0.8
HNRNPC-233ENST00000557768 PACS2Q86VP3 889 aa10.03□□□□□ -0.8
HNRNPC-233ENST00000557768 KCTD12Q96CX2 325 aaKnown RBP10.03□□□□□ -0.8
HNRNPC-233ENST00000557768 SEPT9Q9UHD8 586 aaPredicted RBP10.03□□□□□ -0.8
HNRNPC-233ENST00000557768 IFT140Q96RY7 1462 aa10.03□□□□□ -0.8
HNRNPC-233ENST00000557768 TOPBP1Q92547 1522 aa10.02□□□□□ -0.8
HNRNPC-233ENST00000557768 ONECUT3O60422 494 aaPredicted RBP10.02□□□□□ -0.81
HNRNPC-233ENST00000557768 FAM198AQ9UFP1 575 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms