RNA–Protein interactions for RNA: ENST00000557267.1

KTN1-225, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-225ENST00000557267 HCSTQ9UBK5 93 aa11.36□□□□□ -0.59
KTN1-225ENST00000557267 SPDYE16A6NNV3 312 aaPredicted RBP11.35□□□□□ -0.59
KTN1-225ENST00000557267 PPP1R3GB7ZBB8 358 aa11.35□□□□□ -0.59
KTN1-225ENST00000557267 COL9A1P20849 921 aa11.35□□□□□ -0.59
KTN1-225ENST00000557267 DDX12PQ92771 950 aa11.35□□□□□ -0.59
KTN1-225ENST00000557267 TSHZ2Q9NRE2 1034 aa11.34□□□□□ -0.59
KTN1-225ENST00000557267 C6orf132Q5T0Z8 1188 aa11.33□□□□□ -0.6
KTN1-225ENST00000557267 KCTD12Q96CX2 325 aaKnown RBP11.32□□□□□ -0.6
KTN1-225ENST00000557267 PROX2Q3B8N5 592 aa11.29□□□□□ -0.6
KTN1-225ENST00000557267 RBM33Q96EV2 1170 aaKnown RBP11.29□□□□□ -0.6
KTN1-225ENST00000557267 MRPL50Q8N5N7 158 aaKnown RBP11.28□□□□□ -0.6
KTN1-225ENST00000557267 RABGEF1Q9UJ41 708 aa11.28□□□□□ -0.6
KTN1-225ENST00000557267 ONECUT3O60422 494 aaPredicted RBP11.26□□□□□ -0.61
KTN1-225ENST00000557267 EN1Q05925 392 aaPredicted RBP11.26□□□□□ -0.61
KTN1-225ENST00000557267 NBR1Q14596 966 aa11.26□□□□□ -0.61
KTN1-225ENST00000557267 NBPF3Q9H094 633 aa11.26□□□□□ -0.61
KTN1-225ENST00000557267 GOLGA8CPA6NN73 597 aa11.23□□□□□ -0.61
KTN1-225ENST00000557267 KIAA1468Q9P260 1216 aa11.23□□□□□ -0.61
KTN1-225ENST00000557267 GRXCR2A6NFK2 248 aa11.22□□□□□ -0.61
KTN1-225ENST00000557267 MAP3K7O43318 606 aa11.22□□□□□ -0.61
KTN1-225ENST00000557267 PRIM1P49642 420 aaKnown RBP11.22□□□□□ -0.61
KTN1-225ENST00000557267 TSR1Q2NL82 804 aaKnown RBP11.22□□□□□ -0.61
KTN1-225ENST00000557267 THSD4Q6ZMP0 1018 aa11.22□□□□□ -0.61
KTN1-225ENST00000557267 WNT2BQ93097 391 aa11.22□□□□□ -0.61
KTN1-225ENST00000557267 PTPN5P54829 565 aa11.21□□□□□ -0.61
KTN1-225ENST00000557267 TRIM6-TRIM34B2RNG4 842 aa11.2□□□□□ -0.62
KTN1-225ENST00000557267 PLCB2Q00722 1185 aa11.2□□□□□ -0.62
KTN1-225ENST00000557267 OSBPP22059 807 aa11.19□□□□□ -0.62
KTN1-225ENST00000557267 LAPTM4BQ86VI4 370 aa11.19□□□□□ -0.62
KTN1-225ENST00000557267 PLA2G2EQ9NZK7 142 aa11.19□□□□□ -0.62
KTN1-225ENST00000557267 ARHGEF1Q92888 912 aaKnown RBP11.18□□□□□ -0.62
KTN1-225ENST00000557267 KCNV2Q8TDN2 545 aa11.15□□□□□ -0.62
KTN1-225ENST00000557267 TSKSQ9UJT2 592 aa11.15□□□□□ -0.62
KTN1-225ENST00000557267 CERKQ8TCT0 537 aa11.14□□□□□ -0.63
KTN1-225ENST00000557267 ZFRQ96KR1 1074 aaKnown RBP11.14□□□□□ -0.63
KTN1-225ENST00000557267 ANKK1Q8NFD2 765 aa11.13□□□□□ -0.63
KTN1-225ENST00000557267 SEPT9Q9UHD8 586 aaPredicted RBP11.13□□□□□ -0.63
KTN1-225ENST00000557267 PRSS12P56730 875 aa11.12□□□□□ -0.63
KTN1-225ENST00000557267 PACS2Q86VP3 889 aa11.12□□□□□ -0.63
KTN1-225ENST00000557267 CDCA7LQ96GN5 454 aa11.12□□□□□ -0.63
KTN1-225ENST00000557267 FAM98CQ17RN3 349 aaKnown RBP11.11□□□□□ -0.63
KTN1-225ENST00000557267 SOWAHBA6NEL2 793 aa11.1□□□□□ -0.63
KTN1-225ENST00000557267 FAM198AQ9UFP1 575 aa11.1□□□□□ -0.63
KTN1-225ENST00000557267 MLLT3P42568 568 aaPredicted RBP11.08□□□□□ -0.64
KTN1-225ENST00000557267 BCAMP50895 628 aa11.08□□□□□ -0.64
KTN1-225ENST00000557267 CDHR5Q9HBB8 845 aa11.08□□□□□ -0.64
KTN1-225ENST00000557267 NPDC1Q9NQX5 325 aaPredicted RBP11.07□□□□□ -0.64
KTN1-225ENST00000557267 HAP1P54257 671 aaPredicted RBP11.06□□□□□ -0.64
KTN1-225ENST00000557267 C3orf80F5H4A9 247 aa11.05□□□□□ -0.64
KTN1-225ENST00000557267 IFFO2Q5TF58 517 aa11.04□□□□□ -0.64
KTN1-225ENST00000557267 P3H3Q8IVL6 736 aa11.04□□□□□ -0.64
KTN1-225ENST00000557267 SMAPO00193 183 aa11.03□□□□□ -0.64
KTN1-225ENST00000557267 TATDN2Q93075 761 aa11.03□□□□□ -0.64
KTN1-225ENST00000557267 WBP1LQ9NX94 342 aa11.03□□□□□ -0.64
KTN1-225ENST00000557267 RBM27Q9P2N5 1060 aaKnown RBP11.03□□□□□ -0.64
KTN1-225ENST00000557267 TTC13Q8NBP0 860 aa11.02□□□□□ -0.65
KTN1-225ENST00000557267 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.02□□□□□ -0.65
KTN1-225ENST00000557267 NYAP1Q6ZVC0 841 aa11.01□□□□□ -0.65
KTN1-225ENST00000557267 LRCH3Q96II8 777 aa11.01□□□□□ -0.65
KTN1-225ENST00000557267 NBPF26B4DH59 902 aa10.99□□□□□ -0.65
KTN1-225ENST00000557267 NUDT18Q6ZVK8 323 aa10.99□□□□□ -0.65
KTN1-225ENST00000557267 TSR3Q9UJK0 312 aaKnown RBP10.99□□□□□ -0.65
KTN1-225ENST00000557267 PNMA3Q9UL41 463 aa10.99□□□□□ -0.65
KTN1-225ENST00000557267 SEMA3EO15041 775 aa10.97□□□□□ -0.65
KTN1-225ENST00000557267 SAMD7Q7Z3H4 446 aa10.97□□□□□ -0.65
KTN1-225ENST00000557267 HPS5Q9UPZ3 1129 aa10.97□□□□□ -0.65
KTN1-225ENST00000557267 ITGBL1O95965 494 aaPredicted RBP10.96□□□□□ -0.65
KTN1-225ENST00000557267 PADI6Q6TGC4 694 aa10.96□□□□□ -0.65
KTN1-225ENST00000557267 PTGDRQ13258 359 aa10.95□□□□□ -0.66
KTN1-225ENST00000557267 PPP4CP60510 307 aa10.93□□□□□ -0.66
KTN1-225ENST00000557267 EYA1Q99502 592 aa10.92□□□□□ -0.66
KTN1-225ENST00000557267 KDM2AQ9Y2K7 1162 aa10.91□□□□□ -0.66
KTN1-225ENST00000557267 A0A0G2JS52 829 aa10.9□□□□□ -0.66
KTN1-225ENST00000557267 HDGFP51858 240 aaKnown RBP10.9□□□□□ -0.66
KTN1-225ENST00000557267 NUTM2FA1L443 756 aa10.89□□□□□ -0.67
KTN1-225ENST00000557267 TESPA1A2RU30 521 aaPredicted RBP10.89□□□□□ -0.67
KTN1-225ENST00000557267 RGS20O76081 388 aa10.87□□□□□ -0.67
KTN1-225ENST00000557267 KCNC4Q03721 635 aa10.87□□□□□ -0.67
KTN1-225ENST00000557267 SWT1Q5T5J6 900 aaKnown RBP10.85□□□□□ -0.67
KTN1-225ENST00000557267 FCHSD2O94868 740 aa10.84□□□□□ -0.67
KTN1-225ENST00000557267 TJAP1Q5JTD0 557 aa10.83□□□□□ -0.68
KTN1-225ENST00000557267 SMYD5Q6GMV2 418 aa10.83□□□□□ -0.68
KTN1-225ENST00000557267 VSIG10Q8N0Z9 540 aa10.83□□□□□ -0.68
KTN1-225ENST00000557267 ADGRG1Q9Y653 693 aa10.83□□□□□ -0.68
KTN1-225ENST00000557267 RBM26Q5T8P6 1007 aaKnown RBP10.82□□□□□ -0.68
KTN1-225ENST00000557267 SLF2Q8IX21 1173 aa10.81□□□□□ -0.68
KTN1-225ENST00000557267 RBM46Q8TBY0 533 aaKnown RBP10.81□□□□□ -0.68
KTN1-225ENST00000557267 RNF40O75150 1001 aa10.8□□□□□ -0.68
KTN1-225ENST00000557267 APLP1P51693 650 aa10.8□□□□□ -0.68
KTN1-225ENST00000557267 FAM161AQ3B820 660 aa10.8□□□□□ -0.68
KTN1-225ENST00000557267 NECTIN2Q92692 538 aa10.79□□□□□ -0.68
KTN1-225ENST00000557267 DNAJB2P25686 324 aa10.78□□□□□ -0.68
KTN1-225ENST00000557267 HIC1Q14526 733 aa10.78□□□□□ -0.68
KTN1-225ENST00000557267 MTRQ99707 1265 aa10.78□□□□□ -0.68
KTN1-225ENST00000557267 TMEM134Q9H6X4 195 aa10.77□□□□□ -0.69
KTN1-225ENST00000557267 RCCD1A6NED2 376 aa10.76□□□□□ -0.69
KTN1-225ENST00000557267 IL21Q9HBE4 155 aa10.76□□□□□ -0.69
KTN1-225ENST00000557267 SLC4A3P48751 1232 aa10.75□□□□□ -0.69
KTN1-225ENST00000557267 GPR37O15354 613 aa10.74□□□□□ -0.69
KTN1-225ENST00000557267 OATP04181 439 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms