RNA–Protein interactions for RNA: ENST00000557057.5

ALKBH1-204, Transcript of alkB homolog 1, histone H2A dioxygenase, humanhuman

TSL 3

Gene ALKBH1, Length 1,750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH1-204ENST00000557057 MLH3Q9UHC1 1453 aa25.69■■□□□ 1.7
ALKBH1-204ENST00000557057 FAM69CQ0P6D2 419 aa25.67■■□□□ 1.7
ALKBH1-204ENST00000557057 DEPDC5O75140 1603 aa25.66■■□□□ 1.7
ALKBH1-204ENST00000557057 EIF2AK4Q9P2K8 1649 aaKnown RBP25.65■■□□□ 1.7
ALKBH1-204ENST00000557057 HECW2Q9P2P5 1572 aa25.64■■□□□ 1.7
ALKBH1-204ENST00000557057 A2MP01023 1474 aa25.6■■□□□ 1.69
ALKBH1-204ENST00000557057 RAPGEF3O95398 923 aa25.59■■□□□ 1.69
ALKBH1-204ENST00000557057 PLA2R1Q13018 1463 aa25.58■■□□□ 1.69
ALKBH1-204ENST00000557057 VWDEQ8N2E2 1590 aa25.58■■□□□ 1.69
ALKBH1-204ENST00000557057 KIF3BO15066 747 aa25.58■■□□□ 1.69
ALKBH1-204ENST00000557057 RICTORQ6R327 1708 aa25.57■■□□□ 1.68
ALKBH1-204ENST00000557057 ATP10AO60312 1499 aa25.57■■□□□ 1.68
ALKBH1-204ENST00000557057 PRDM15P57071 1507 aaPredicted RBP25.57■■□□□ 1.68
ALKBH1-204ENST00000557057 KANK1Q14678 1352 aa25.56■■□□□ 1.68
ALKBH1-204ENST00000557057 MROH1Q8NDA8 1641 aa25.55■■□□□ 1.68
ALKBH1-204ENST00000557057 CCDC144AA2RUR9 1427 aa25.55■■□□□ 1.68
ALKBH1-204ENST00000557057 ABCA6Q8N139 1617 aa25.54■■□□□ 1.68
ALKBH1-204ENST00000557057 PPRC1Q5VV67 1664 aaKnown RBP25.54■■□□□ 1.68
ALKBH1-204ENST00000557057 FRMPD1Q5SYB0 1578 aa25.54■■□□□ 1.68
ALKBH1-204ENST00000557057 NBPF8Q3BBV2 869 aa25.51■■□□□ 1.67
ALKBH1-204ENST00000557057 TET3O43151 1660 aa25.51■■□□□ 1.67
ALKBH1-204ENST00000557057 RNF17Q9BXT8 1623 aaKnown RBP25.5■■□□□ 1.67
ALKBH1-204ENST00000557057 E9PCH4 1651 aa25.5■■□□□ 1.67
ALKBH1-204ENST00000557057 DIP2CQ9Y2E4 1556 aa25.48■■□□□ 1.67
ALKBH1-204ENST00000557057 BCORL1Q5H9F3 1711 aa25.48■■□□□ 1.67
ALKBH1-204ENST00000557057 TSPOAP1O95153 1857 aa25.48■■□□□ 1.67
ALKBH1-204ENST00000557057 UHRF1BP1Q6BDS2 1440 aa25.46■■□□□ 1.67
ALKBH1-204ENST00000557057 KIF13AQ9H1H9 1805 aa25.46■■□□□ 1.67
ALKBH1-204ENST00000557057 ZMYM4Q5VZL5 1548 aa25.46■■□□□ 1.67
ALKBH1-204ENST00000557057 LMTK2Q8IWU2 1503 aa25.45■■□□□ 1.66
ALKBH1-204ENST00000557057 PTPRTO14522 1441 aa25.44■■□□□ 1.66
ALKBH1-204ENST00000557057 HIRIP3Q9BW71 556 aaPredicted RBP25.44■■□□□ 1.66
ALKBH1-204ENST00000557057 TRPM2O94759 1503 aa25.43■■□□□ 1.66
ALKBH1-204ENST00000557057 YEATS2Q9ULM3 1422 aa25.42■■□□□ 1.66
ALKBH1-204ENST00000557057 EIF4G2P78344 907 aaKnown RBP eCLIP25.41■■□□□ 1.66
ALKBH1-204ENST00000557057 EFCAB6Q5THR3 1501 aa25.4■■□□□ 1.66
ALKBH1-204ENST00000557057 SPHKAPQ2M3C7 1700 aa25.39■■□□□ 1.66
ALKBH1-204ENST00000557057 HSPA5P11021 654 aaKnown RBP25.39■■□□□ 1.65
ALKBH1-204ENST00000557057 DCAF11Q8TEB1 546 aa25.38■■□□□ 1.65
ALKBH1-204ENST00000557057 MIER1Q8N108 512 aa25.37■■□□□ 1.65
ALKBH1-204ENST00000557057 ZNF326Q5BKZ1 582 aaKnown RBP25.35■■□□□ 1.65
ALKBH1-204ENST00000557057 GGT6Q6P531 493 aa25.35■■□□□ 1.65
ALKBH1-204ENST00000557057 CEP152O94986 1710 aa25.35■■□□□ 1.65
ALKBH1-204ENST00000557057 RALGAPBQ86X10 1494 aa25.35■■□□□ 1.65
ALKBH1-204ENST00000557057 SPATA31E1Q6ZUB1 1445 aa25.34■■□□□ 1.65
ALKBH1-204ENST00000557057 KDM2AQ9Y2K7 1162 aa25.33■■□□□ 1.65
ALKBH1-204ENST00000557057 RGL3Q3MIN7 710 aa25.32■■□□□ 1.64
ALKBH1-204ENST00000557057 ABCC3O15438 1527 aa25.31■■□□□ 1.64
ALKBH1-204ENST00000557057 CLTCL1P53675 1640 aa25.31■■□□□ 1.64
ALKBH1-204ENST00000557057 PRAG1Q86YV5 1406 aa25.3■■□□□ 1.64
ALKBH1-204ENST00000557057 DDX10Q13206 875 aaKnown RBP25.28■■□□□ 1.64
ALKBH1-204ENST00000557057 COL17A1Q9UMD9 1497 aaPredicted RBP25.28■■□□□ 1.64
ALKBH1-204ENST00000557057 WASHC2CQ9Y4E1 1318 aa25.28■■□□□ 1.64
ALKBH1-204ENST00000557057 REREQ9P2R6 1566 aa25.27■■□□□ 1.64
ALKBH1-204ENST00000557057 NPATQ14207 1427 aa25.27■■□□□ 1.64
ALKBH1-204ENST00000557057 NEURL4Q96JN8 1562 aa25.26■■□□□ 1.63
ALKBH1-204ENST00000557057 USP47Q96K76 1375 aa25.23■■□□□ 1.63
ALKBH1-204ENST00000557057 ZC3H13Q5T200 1668 aaKnown RBP25.23■■□□□ 1.63
ALKBH1-204ENST00000557057 CAMSAP1Q5T5Y3 1602 aa25.23■■□□□ 1.63
ALKBH1-204ENST00000557057 AGLP35573 1532 aa25.22■■□□□ 1.63
ALKBH1-204ENST00000557057 TRPM1Q7Z4N2 1603 aa25.21■■□□□ 1.63
ALKBH1-204ENST00000557057 WASHC2AQ641Q2 1341 aa25.21■■□□□ 1.63
ALKBH1-204ENST00000557057 UGGT1Q9NYU2 1555 aa25.2■■□□□ 1.62
ALKBH1-204ENST00000557057 CARD11Q9BXL7 1154 aa25.2■■□□□ 1.62
ALKBH1-204ENST00000557057 ARHGAP31Q2M1Z3 1444 aa25.19■■□□□ 1.62
ALKBH1-204ENST00000557057 CNTLNQ9NXG0 1405 aa25.19■■□□□ 1.62
ALKBH1-204ENST00000557057 STAC3Q96MF2 364 aa25.19■■□□□ 1.62
ALKBH1-204ENST00000557057 ROCK2O75116 1388 aaKnown RBP25.19■■□□□ 1.62
ALKBH1-204ENST00000557057 ARHGEF40Q8TER5 1519 aa25.18■■□□□ 1.62
ALKBH1-204ENST00000557057 GPRASP1Q5JY77 1395 aa25.16■■□□□ 1.62
ALKBH1-204ENST00000557057 NOS1P29475 1434 aa25.16■■□□□ 1.62
ALKBH1-204ENST00000557057 CCDC7Q96M83 1385 aa25.14■■□□□ 1.62
ALKBH1-204ENST00000557057 KIF1BO60333 1816 aa25.14■■□□□ 1.62
ALKBH1-204ENST00000557057 C11orf95C9JLR9 678 aaPredicted RBP25.14■■□□□ 1.62
ALKBH1-204ENST00000557057 MADDQ8WXG6 1647 aa25.13■■□□□ 1.61
ALKBH1-204ENST00000557057 LAMC1P11047 1609 aa25.12■■□□□ 1.61
ALKBH1-204ENST00000557057 SIGLEC1Q9BZZ2 1709 aa25.11■■□□□ 1.61
ALKBH1-204ENST00000557057 PPP6R1Q9UPN7 881 aa25.11■■□□□ 1.61
ALKBH1-204ENST00000557057 ADGRB3O60242 1522 aa25.11■■□□□ 1.61
ALKBH1-204ENST00000557057 NBPF1Q3BBV0 1214 aa25.1■■□□□ 1.61
ALKBH1-204ENST00000557057 POLR1AO95602 1720 aaPredicted RBP25.1■■□□□ 1.61
ALKBH1-204ENST00000557057 CFAP65Q6ZU64 1925 aaKnown RBP25.09■■□□□ 1.61
ALKBH1-204ENST00000557057 KIF7Q2M1P5 1343 aa25.08■■□□□ 1.61
ALKBH1-204ENST00000557057 MYOM2P54296 1465 aa25.08■■□□□ 1.61
ALKBH1-204ENST00000557057 MROH2AA6NES4 1674 aa25.08■■□□□ 1.6
ALKBH1-204ENST00000557057 SYNMO15061 1565 aa25.07■■□□□ 1.6
ALKBH1-204ENST00000557057 PIK3C2BO00750 1634 aa25.06■■□□□ 1.6
ALKBH1-204ENST00000557057 ST20-MTHFSA0A0A6YYL1 179 aa25.04■■□□□ 1.6
ALKBH1-204ENST00000557057 IFT172Q9UG01 1749 aa25.04■■□□□ 1.6
ALKBH1-204ENST00000557057 ARID4BQ4LE39 1312 aaPredicted RBP25.04■■□□□ 1.6
ALKBH1-204ENST00000557057 PREX1Q8TCU6 1659 aa25.01■■□□□ 1.59
ALKBH1-204ENST00000557057 ANP32CO43423 234 aa25■■□□□ 1.59
ALKBH1-204ENST00000557057 NRXN1Q9ULB1 1477 aa25■■□□□ 1.59
ALKBH1-204ENST00000557057 CHGAP10645 457 aaKnown RBP25■■□□□ 1.59
ALKBH1-204ENST00000557057 KIAA1210Q9ULL0 1709 aa24.99■■□□□ 1.59
ALKBH1-204ENST00000557057 TRHP20396 242 aaPredicted RBP24.99■■□□□ 1.59
ALKBH1-204ENST00000557057 DNAJC5Q9H3Z4 198 aa24.99■■□□□ 1.59
ALKBH1-204ENST00000557057 SLC52A1Q9NWF4 448 aa24.99■■□□□ 1.59
ALKBH1-204ENST00000557057 RPGRIP1LQ68CZ1 1315 aa24.98■■□□□ 1.59
ALKBH1-204ENST00000557057 CLTCQ00610 1675 aaKnown RBP24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms