RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 PRDM15P57071 1507 aaPredicted RBP26.41■■□□□ 1.82
PSEN1-218ENST00000556864 CNTLNQ9NXG0 1405 aa26.4■■□□□ 1.82
PSEN1-218ENST00000556864 KDM5DQ9BY66 1539 aa26.39■■□□□ 1.82
PSEN1-218ENST00000556864 ZC3H13Q5T200 1668 aaKnown RBP26.39■■□□□ 1.82
PSEN1-218ENST00000556864 RIMS1Q86UR5 1692 aaKnown RBP26.39■■□□□ 1.82
PSEN1-218ENST00000556864 MROH1Q8NDA8 1641 aa26.39■■□□□ 1.81
PSEN1-218ENST00000556864 NAIPQ13075 1403 aa26.38■■□□□ 1.81
PSEN1-218ENST00000556864 GGT6Q6P531 493 aa26.37■■□□□ 1.81
PSEN1-218ENST00000556864 ESF1Q9H501 851 aaKnown RBP26.37■■□□□ 1.81
PSEN1-218ENST00000556864 UNC13BO14795 1591 aa26.37■■□□□ 1.81
PSEN1-218ENST00000556864 PPP6R1Q9UPN7 881 aa26.36■■□□□ 1.81
PSEN1-218ENST00000556864 MROH2AA6NES4 1674 aa26.35■■□□□ 1.81
PSEN1-218ENST00000556864 KANK1Q14678 1352 aa26.33■■□□□ 1.81
PSEN1-218ENST00000556864 KDM4FA0A1W2PPD8 638 aa26.33■■□□□ 1.81
PSEN1-218ENST00000556864 CLTCQ00610 1675 aaKnown RBP26.33■■□□□ 1.81
PSEN1-218ENST00000556864 ABCC3O15438 1527 aa26.3■■□□□ 1.8
PSEN1-218ENST00000556864 PTPRMP28827 1452 aa26.3■■□□□ 1.8
PSEN1-218ENST00000556864 VWDEQ8N2E2 1590 aa26.28■■□□□ 1.8
PSEN1-218ENST00000556864 CEP152O94986 1710 aa26.26■■□□□ 1.79
PSEN1-218ENST00000556864 LMTK2Q8IWU2 1503 aa26.25■■□□□ 1.79
PSEN1-218ENST00000556864 WASHC2CQ9Y4E1 1318 aa26.25■■□□□ 1.79
PSEN1-218ENST00000556864 CAMSAP1Q5T5Y3 1602 aa26.25■■□□□ 1.79
PSEN1-218ENST00000556864 TRIM26Q12899 539 aaPredicted RBP26.24■■□□□ 1.79
PSEN1-218ENST00000556864 IQGAP3Q86VI3 1631 aa26.24■■□□□ 1.79
PSEN1-218ENST00000556864 SETD5Q9C0A6 1442 aa26.23■■□□□ 1.79
PSEN1-218ENST00000556864 C3P01024 1663 aa26.23■■□□□ 1.79
PSEN1-218ENST00000556864 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.23■■□□□ 1.792e-7■□□□□ 10.6
PSEN1-218ENST00000556864 ACIN1Q9UKV3 1341 aaKnown RBP26.2■■□□□ 1.79
PSEN1-218ENST00000556864 EFCAB6Q5THR3 1501 aa26.19■■□□□ 1.78
PSEN1-218ENST00000556864 TET3O43151 1660 aa26.19■■□□□ 1.78
PSEN1-218ENST00000556864 PZPP20742 1482 aa26.18■■□□□ 1.78
PSEN1-218ENST00000556864 ZMYM3Q14202 1370 aa26.18■■□□□ 1.78
PSEN1-218ENST00000556864 NUP155O75694 1391 aa26.17■■□□□ 1.78
PSEN1-218ENST00000556864 NPATQ14207 1427 aa26.15■■□□□ 1.78
PSEN1-218ENST00000556864 ARHGAP31Q2M1Z3 1444 aa26.14■■□□□ 1.78
PSEN1-218ENST00000556864 RAB3GAP2Q9H2M9 1393 aa26.13■■□□□ 1.77
PSEN1-218ENST00000556864 RPRD2Q5VT52 1461 aaKnown RBP26.11■■□□□ 1.77
PSEN1-218ENST00000556864 PLPPR3Q6T4P5 718 aa26.1■■□□□ 1.77
PSEN1-218ENST00000556864 AEBP2Q6ZN18 517 aaPredicted RBP26.1■■□□□ 1.77
PSEN1-218ENST00000556864 TRIM52Q96A61 297 aa26.09■■□□□ 1.77
PSEN1-218ENST00000556864 SPATA31D1Q6ZQQ2 1576 aa26.07■■□□□ 1.76
PSEN1-218ENST00000556864 ERVK-7P63135 1459 aa26.07■■□□□ 1.76
PSEN1-218ENST00000556864 CEBPAP49715 358 aaPredicted RBP26.07■■□□□ 1.76
PSEN1-218ENST00000556864 PREX1Q8TCU6 1659 aa26.06■■□□□ 1.76
PSEN1-218ENST00000556864 MYO3AQ8NEV4 1616 aa26.04■■□□□ 1.76
PSEN1-218ENST00000556864 E9PCH4 1651 aa26.04■■□□□ 1.76
PSEN1-218ENST00000556864 HRCP23327 699 aa26.03■■□□□ 1.76
PSEN1-218ENST00000556864 TNRQ92752 1358 aa26.03■■□□□ 1.76
PSEN1-218ENST00000556864 UHRF1BP1Q6BDS2 1440 aa26■■□□□ 1.75
PSEN1-218ENST00000556864 SLC4A1APQ9BWU0 796 aaKnown RBP25.98■■□□□ 1.75
PSEN1-218ENST00000556864 ZNF142P52746 1687 aaPredicted RBP25.98■■□□□ 1.75
PSEN1-218ENST00000556864 NLRP1Q9C000 1473 aa25.98■■□□□ 1.75
PSEN1-218ENST00000556864 NOS1P29475 1434 aa25.97■■□□□ 1.75
PSEN1-218ENST00000556864 FBXO31Q5XUX0 539 aaPredicted RBP25.95■■□□□ 1.74
PSEN1-218ENST00000556864 SYNMO15061 1565 aa25.95■■□□□ 1.74
PSEN1-218ENST00000556864 SPHKAPQ2M3C7 1700 aa25.94■■□□□ 1.74
PSEN1-218ENST00000556864 CEP170BQ9Y4F5 1589 aaPredicted RBP25.94■■□□□ 1.74
PSEN1-218ENST00000556864 A2ML1A8K2U0 1454 aa25.91■■□□□ 1.74
PSEN1-218ENST00000556864 LMTK3Q96Q04 1460 aa25.91■■□□□ 1.74
PSEN1-218ENST00000556864 TRPM2O94759 1503 aa25.91■■□□□ 1.74
PSEN1-218ENST00000556864 PKD2Q13563 968 aa25.9■■□□□ 1.74
PSEN1-218ENST00000556864 MPHOSPH9Q99550 1183 aa25.9■■□□□ 1.74
PSEN1-218ENST00000556864 SETD1BQ9UPS6 1966 aaKnown RBP25.89■■□□□ 1.74
PSEN1-218ENST00000556864 PTPRTO14522 1441 aa25.88■■□□□ 1.73
PSEN1-218ENST00000556864 PIK3C2BO00750 1634 aa25.87■■□□□ 1.73
PSEN1-218ENST00000556864 PCGF6Q9BYE7 350 aa25.85■■□□□ 1.73
PSEN1-218ENST00000556864 ADGRB3O60242 1522 aa25.84■■□□□ 1.73
PSEN1-218ENST00000556864 KDM5AP29375 1690 aaKnown RBP25.84■■□□□ 1.73
PSEN1-218ENST00000556864 UGGT1Q9NYU2 1555 aa25.83■■□□□ 1.73
PSEN1-218ENST00000556864 CFAP65Q6ZU64 1925 aaKnown RBP25.83■■□□□ 1.73
PSEN1-218ENST00000556864 SLC52A1Q9NWF4 448 aa25.83■■□□□ 1.73
PSEN1-218ENST00000556864 UBR1Q8IWV7 1749 aa25.8■■□□□ 1.72
PSEN1-218ENST00000556864 CLTCL1P53675 1640 aa25.78■■□□□ 1.72
PSEN1-218ENST00000556864 PLA2R1Q13018 1463 aa25.78■■□□□ 1.72
PSEN1-218ENST00000556864 CCDC144AA2RUR9 1427 aa25.76■■□□□ 1.71
PSEN1-218ENST00000556864 IDI1Q13907 227 aa25.74■■□□□ 1.71
PSEN1-218ENST00000556864 FOXD1Q16676 465 aa25.74■■□□□ 1.71
PSEN1-218ENST00000556864 STAG3Q9UJ98 1225 aa25.74■■□□□ 1.71
PSEN1-218ENST00000556864 TMEM131LA2VDJ0 1609 aa25.73■■□□□ 1.71
PSEN1-218ENST00000556864 THEMISQ8N1K5 641 aaPredicted RBP25.72■■□□□ 1.71
PSEN1-218ENST00000556864 HSPA2P54652 639 aa25.69■■□□□ 1.7
PSEN1-218ENST00000556864 KIF1BO60333 1816 aa25.69■■□□□ 1.7
PSEN1-218ENST00000556864 DHX57Q6P158 1386 aaKnown RBP25.69■■□□□ 1.7
PSEN1-218ENST00000556864 SLIT1O75093 1534 aa25.68■■□□□ 1.7
PSEN1-218ENST00000556864 ANKRD30BQ9BXX2 1392 aa25.67■■□□□ 1.7
PSEN1-218ENST00000556864 ARHGAP23Q9P227 1491 aa25.66■■□□□ 1.7
PSEN1-218ENST00000556864 POLR1AO95602 1720 aaPredicted RBP25.66■■□□□ 1.7
PSEN1-218ENST00000556864 CHGAP10645 457 aaKnown RBP25.66■■□□□ 1.7
PSEN1-218ENST00000556864 TMEM2Q9UHN6 1383 aa25.65■■□□□ 1.7
PSEN1-218ENST00000556864 NEURL4Q96JN8 1562 aa25.65■■□□□ 1.7
PSEN1-218ENST00000556864 MYO5BQ9ULV0 1848 aa25.63■■□□□ 1.69
PSEN1-218ENST00000556864 SCAF11Q99590 1463 aaKnown RBP25.61■■□□□ 1.69
PSEN1-218ENST00000556864 RIMS2Q9UQ26 1411 aa25.59■■□□□ 1.69
PSEN1-218ENST00000556864 ZFYVE9O95405 1425 aa25.58■■□□□ 1.69
PSEN1-218ENST00000556864 ANKLE2Q86XL3 938 aa25.58■■□□□ 1.69
PSEN1-218ENST00000556864 EID1Q9Y6B2 187 aa25.58■■□□□ 1.69
PSEN1-218ENST00000556864 STRCQ7RTU9 1775 aa25.58■■□□□ 1.69
PSEN1-218ENST00000556864 SPATA31E1Q6ZUB1 1445 aa25.57■■□□□ 1.68
PSEN1-218ENST00000556864 ZNF326Q5BKZ1 582 aaKnown RBP25.56■■□□□ 1.68
PSEN1-218ENST00000556864 NEXMIFQ5QGS0 1516 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms