RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 SHPRHQ149N8 1683 aa14.66□□□□□ -0.06
PSEN1-215ENST00000556011 A2ML1A8K2U0 1454 aa14.65□□□□□ -0.06
PSEN1-215ENST00000556011 R3HDM1Q15032 1099 aaKnown RBP14.65□□□□□ -0.06
PSEN1-215ENST00000556011 ANKLE2Q86XL3 938 aa14.65□□□□□ -0.06
PSEN1-215ENST00000556011 FGD6Q6ZV73 1430 aa14.65□□□□□ -0.06
PSEN1-215ENST00000556011 ATP10BO94823 1461 aa14.64□□□□□ -0.07
PSEN1-215ENST00000556011 SCAPERQ9BY12 1400 aa14.64□□□□□ -0.07
PSEN1-215ENST00000556011 IQGAP1P46940 1657 aa14.64□□□□□ -0.07
PSEN1-215ENST00000556011 MED14O60244 1454 aa14.62□□□□□ -0.07
PSEN1-215ENST00000556011 UGGT2Q9NYU1 1516 aa14.61□□□□□ -0.07
PSEN1-215ENST00000556011 RTEL1-TNFRSF6BF6WH68 1400 aa14.61□□□□□ -0.07
PSEN1-215ENST00000556011 BIVM-ERCC5R4GMW8 1640 aa14.61□□□□□ -0.07
PSEN1-215ENST00000556011 SCAF11Q99590 1463 aaKnown RBP14.61□□□□□ -0.07
PSEN1-215ENST00000556011 C8orf37Q96NL8 207 aa14.59□□□□□ -0.07
PSEN1-215ENST00000556011 REREQ9P2R6 1566 aa14.59□□□□□ -0.07
PSEN1-215ENST00000556011 DIP2CQ9Y2E4 1556 aa14.59□□□□□ -0.07
PSEN1-215ENST00000556011 ADGBQ8N7X0 1667 aa14.58□□□□□ -0.07
PSEN1-215ENST00000556011 IGF1RP08069 1367 aa14.57□□□□□ -0.08
PSEN1-215ENST00000556011 DEPDC5O75140 1603 aa14.56□□□□□ -0.08
PSEN1-215ENST00000556011 HSPA6P17066 643 aa14.56□□□□□ -0.08
PSEN1-215ENST00000556011 SF3B2Q13435 895 aaKnown RBP14.56□□□□□ -0.08
PSEN1-215ENST00000556011 PCNTO95613 3336 aa14.56□□□□□ -0.08
PSEN1-215ENST00000556011 LRRC9Q6ZRR7 1453 aa14.56□□□□□ -0.08
PSEN1-215ENST00000556011 CLTCQ00610 1675 aaKnown RBP14.54□□□□□ -0.08
PSEN1-215ENST00000556011 ABCC1P33527 1531 aa14.52□□□□□ -0.08
PSEN1-215ENST00000556011 NINLQ9Y2I6 1382 aa14.52□□□□□ -0.08
PSEN1-215ENST00000556011 PPP1R1BQ9UD71 204 aaPredicted RBP14.52□□□□□ -0.09
PSEN1-215ENST00000556011 MYT1LQ9UL68 1186 aa14.52□□□□□ -0.09
PSEN1-215ENST00000556011 KDM5DQ9BY66 1539 aa14.51□□□□□ -0.09
PSEN1-215ENST00000556011 ITSN2Q9NZM3 1697 aa14.51□□□□□ -0.09
PSEN1-215ENST00000556011 ABCA6Q8N139 1617 aa14.51□□□□□ -0.09
PSEN1-215ENST00000556011 SLAIN2Q9P270 581 aa14.49□□□□□ -0.09
PSEN1-215ENST00000556011 PLCH2O75038 1416 aa14.48□□□□□ -0.09
PSEN1-215ENST00000556011 TMEM94Q12767 1356 aa14.47□□□□□ -0.09
PSEN1-215ENST00000556011 ZC3H13Q5T200 1668 aaKnown RBP14.46□□□□□ -0.1
PSEN1-215ENST00000556011 WWC3Q9ULE0 1092 aa14.45□□□□□ -0.1
PSEN1-215ENST00000556011 TNS2Q63HR2 1409 aa14.43□□□□□ -0.1
PSEN1-215ENST00000556011 AFAP1Q8N556 730 aa14.43□□□□□ -0.1
PSEN1-215ENST00000556011 MAP3K1Q13233 1512 aa14.42□□□□□ -0.1
PSEN1-215ENST00000556011 TRPC5Q9UL62 973 aaPredicted RBP14.42□□□□□ -0.1
PSEN1-215ENST00000556011 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.41□□□□□ -0.1
PSEN1-215ENST00000556011 HNRNPUL2Q1KMD3 747 aaKnown RBP14.41□□□□□ -0.1
PSEN1-215ENST00000556011 FAM161AQ3B820 660 aa14.41□□□□□ -0.1
PSEN1-215ENST00000556011 DIP2AQ14689 1571 aa14.41□□□□□ -0.1
PSEN1-215ENST00000556011 THEMISQ8N1K5 641 aaPredicted RBP14.4□□□□□ -0.1
PSEN1-215ENST00000556011 CARMIL1Q5VZK9 1371 aa14.39□□□□□ -0.11
PSEN1-215ENST00000556011 USP21Q9UK80 565 aa14.39□□□□□ -0.11
PSEN1-215ENST00000556011 ZNF518AQ6AHZ1 1483 aa14.38□□□□□ -0.11
PSEN1-215ENST00000556011 BAG6P46379 1132 aa14.38□□□□□ -0.11
PSEN1-215ENST00000556011 DNAJC5GQ8N7S2 189 aa14.38□□□□□ -0.11
PSEN1-215ENST00000556011 KIF14Q15058 1648 aa14.37□□□□□ -0.11
PSEN1-215ENST00000556011 AHDC1Q5TGY3 1603 aaPredicted RBP14.37□□□□□ -0.11
PSEN1-215ENST00000556011 UNC13BO14795 1591 aa14.37□□□□□ -0.11
PSEN1-215ENST00000556011 BRWD3Q6RI45 1802 aa14.36□□□□□ -0.11
PSEN1-215ENST00000556011 SHANK3Q9BYB0 1731 aa14.35□□□□□ -0.11
PSEN1-215ENST00000556011 ATRNO75882 1429 aa14.34□□□□□ -0.11
PSEN1-215ENST00000556011 ATP7AQ04656 1500 aa14.33□□□□□ -0.12
PSEN1-215ENST00000556011 EN1Q05925 392 aaPredicted RBP14.33□□□□□ -0.12
PSEN1-215ENST00000556011 ADAMTS2O95450 1211 aa14.32□□□□□ -0.12
PSEN1-215ENST00000556011 PROSER2Q86WR7 435 aaPredicted RBP14.31□□□□□ -0.12
PSEN1-215ENST00000556011 SPON1Q9HCB6 807 aa14.31□□□□□ -0.12
PSEN1-215ENST00000556011 GOLGB1Q14789 3259 aaKnown RBP14.31□□□□□ -0.12
PSEN1-215ENST00000556011 FAM135AQ9P2D6 1515 aa14.31□□□□□ -0.12
PSEN1-215ENST00000556011 UGGT1Q9NYU2 1555 aa14.3□□□□□ -0.12
PSEN1-215ENST00000556011 TNRQ92752 1358 aa14.3□□□□□ -0.12
PSEN1-215ENST00000556011 RALGAPBQ86X10 1494 aa14.3□□□□□ -0.12
PSEN1-215ENST00000556011 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.29□□□□□ -0.121e-7■□□□□ 8.2
PSEN1-215ENST00000556011 MSH6P52701 1360 aa14.29□□□□□ -0.12
PSEN1-215ENST00000556011 TIAM1Q13009 1591 aa14.29□□□□□ -0.12
PSEN1-215ENST00000556011 FBXO31Q5XUX0 539 aaPredicted RBP14.28□□□□□ -0.12
PSEN1-215ENST00000556011 MLH3Q9UHC1 1453 aa14.27□□□□□ -0.12
PSEN1-215ENST00000556011 FAM83GA6ND36 823 aa14.25□□□□□ -0.13
PSEN1-215ENST00000556011 KCNQ2O43526 872 aa14.25□□□□□ -0.13
PSEN1-215ENST00000556011 GOLGA3Q08378 1498 aa14.25□□□□□ -0.13
PSEN1-215ENST00000556011 ARHGAP23Q9P227 1491 aa14.25□□□□□ -0.13
PSEN1-215ENST00000556011 SPHKAPQ2M3C7 1700 aa14.23□□□□□ -0.13
PSEN1-215ENST00000556011 APLP1P51693 650 aa14.22□□□□□ -0.13
PSEN1-215ENST00000556011 PLEKHD1A6NEE1 506 aa14.21□□□□□ -0.13
PSEN1-215ENST00000556011 EFCAB2Q5VUJ9 269 aa14.21□□□□□ -0.13
PSEN1-215ENST00000556011 FNBP4Q8N3X1 1017 aaPredicted RBP14.21□□□□□ -0.13
PSEN1-215ENST00000556011 KDM5AP29375 1690 aaKnown RBP14.2□□□□□ -0.14
PSEN1-215ENST00000556011 KIF27Q86VH2 1401 aa14.2□□□□□ -0.14
PSEN1-215ENST00000556011 AATKQ6ZMQ8 1374 aa14.2□□□□□ -0.14
PSEN1-215ENST00000556011 KIDINS220Q9ULH0 1771 aa14.19□□□□□ -0.14
PSEN1-215ENST00000556011 GJD4Q96KN9 370 aaPredicted RBP14.19□□□□□ -0.14
PSEN1-215ENST00000556011 PRDM15P57071 1507 aaPredicted RBP14.19□□□□□ -0.14
PSEN1-215ENST00000556011 ABCC3O15438 1527 aa14.18□□□□□ -0.14
PSEN1-215ENST00000556011 EZH2Q15910 746 aaKnown RBP14.17□□□□□ -0.14
PSEN1-215ENST00000556011 GGT6Q6P531 493 aa14.17□□□□□ -0.14
PSEN1-215ENST00000556011 JMYQ8N9B5 988 aa14.17□□□□□ -0.14
PSEN1-215ENST00000556011 SETD5Q9C0A6 1442 aa14.16□□□□□ -0.14
PSEN1-215ENST00000556011 TNRC18O15417 2968 aaPredicted RBP14.15□□□□□ -0.14
PSEN1-215ENST00000556011 CAMSAP2Q08AD1 1489 aa14.15□□□□□ -0.14
PSEN1-215ENST00000556011 KCNA6P17658 529 aa14.15□□□□□ -0.14
PSEN1-215ENST00000556011 A2MP01023 1474 aa14.14□□□□□ -0.15
PSEN1-215ENST00000556011 PNPLA6Q8IY17 1366 aa14.14□□□□□ -0.15
PSEN1-215ENST00000556011 KIAA1210Q9ULL0 1709 aa14.14□□□□□ -0.15
PSEN1-215ENST00000556011 NRKQ7Z2Y5 1582 aa14.13□□□□□ -0.15
PSEN1-215ENST00000556011 NLRP1Q9C000 1473 aa14.13□□□□□ -0.15
PSEN1-215ENST00000556011 FAM9AQ8IZU1 332 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms