RNA–Protein interactions for RNA: ENST00000555839.5

APEX1-211, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-211ENST00000555839 SETD1BQ9UPS6 1966 aaKnown RBP20.29■□□□□ 0.84
APEX1-211ENST00000555839 MROH2AA6NES4 1674 aa20.29■□□□□ 0.84
APEX1-211ENST00000555839 CLTCQ00610 1675 aaKnown RBP20.28■□□□□ 0.84
APEX1-211ENST00000555839 HSPA2P54652 639 aa20.26■□□□□ 0.83
APEX1-211ENST00000555839 NPATQ14207 1427 aa20.26■□□□□ 0.83
APEX1-211ENST00000555839 NCOA1Q15788 1441 aa20.26■□□□□ 0.83
APEX1-211ENST00000555839 UHRF1BP1Q6BDS2 1440 aa20.25■□□□□ 0.83
APEX1-211ENST00000555839 EIF2AK4Q9P2K8 1649 aaKnown RBP20.24■□□□□ 0.83
APEX1-211ENST00000555839 FAM135AQ9P2D6 1515 aa20.24■□□□□ 0.83
APEX1-211ENST00000555839 ERBINQ96RT1 1412 aa20.24■□□□□ 0.83
APEX1-211ENST00000555839 PREX1Q8TCU6 1659 aa20.23■□□□□ 0.83
APEX1-211ENST00000555839 KDM5DQ9BY66 1539 aa20.22■□□□□ 0.83
APEX1-211ENST00000555839 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.22■□□□□ 0.83
APEX1-211ENST00000555839 ADGRL2O95490 1459 aa20.21■□□□□ 0.83
APEX1-211ENST00000555839 RNF17Q9BXT8 1623 aaKnown RBP20.2■□□□□ 0.82
APEX1-211ENST00000555839 PTPRKQ15262 1439 aa20.2■□□□□ 0.82
APEX1-211ENST00000555839 ITGAEP38570 1179 aa20.19■□□□□ 0.82
APEX1-211ENST00000555839 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.18■□□□□ 0.821e-8■□□□□ 10
APEX1-211ENST00000555839 FBXO31Q5XUX0 539 aaPredicted RBP20.16■□□□□ 0.82
APEX1-211ENST00000555839 KANK1Q14678 1352 aa20.16■□□□□ 0.82
APEX1-211ENST00000555839 ROCK1Q13464 1354 aa20.15■□□□□ 0.82
APEX1-211ENST00000555839 PZPP20742 1482 aa20.15■□□□□ 0.82
APEX1-211ENST00000555839 ABCC3O15438 1527 aa20.14■□□□□ 0.81
APEX1-211ENST00000555839 RRBP1Q9P2E9 1410 aaKnown RBP20.14■□□□□ 0.81
APEX1-211ENST00000555839 ANKRD50Q9ULJ7 1429 aa20.13■□□□□ 0.81
APEX1-211ENST00000555839 ZC3H13Q5T200 1668 aaKnown RBP20.13■□□□□ 0.81
APEX1-211ENST00000555839 MROH1Q8NDA8 1641 aa20.13■□□□□ 0.81
APEX1-211ENST00000555839 TNRQ92752 1358 aa20.11■□□□□ 0.81
APEX1-211ENST00000555839 DMRT2Q9Y5R5 561 aa20.11■□□□□ 0.81
APEX1-211ENST00000555839 PRDM15P57071 1507 aaPredicted RBP20.1■□□□□ 0.81
APEX1-211ENST00000555839 DEPDC5O75140 1603 aa20.09■□□□□ 0.81
APEX1-211ENST00000555839 MYO3AQ8NEV4 1616 aa20.06■□□□□ 0.8
APEX1-211ENST00000555839 CEP152O94986 1710 aa20.06■□□□□ 0.8
APEX1-211ENST00000555839 ARHGAP31Q2M1Z3 1444 aa20.06■□□□□ 0.8
APEX1-211ENST00000555839 CAMSAP1Q5T5Y3 1602 aa20.05■□□□□ 0.8
APEX1-211ENST00000555839 A2ML1A8K2U0 1454 aa20.05■□□□□ 0.8
APEX1-211ENST00000555839 CEP170BQ9Y4F5 1589 aaPredicted RBP20.04■□□□□ 0.8
APEX1-211ENST00000555839 NLRP1Q9C000 1473 aa20.03■□□□□ 0.8
APEX1-211ENST00000555839 THEMISQ8N1K5 641 aaPredicted RBP20.02■□□□□ 0.8
APEX1-211ENST00000555839 ERVK-7P63135 1459 aa20.02■□□□□ 0.8
APEX1-211ENST00000555839 ZNF142P52746 1687 aaPredicted RBP20.02■□□□□ 0.8
APEX1-211ENST00000555839 LMTK2Q8IWU2 1503 aa20.02■□□□□ 0.79
APEX1-211ENST00000555839 SPATA31D1Q6ZQQ2 1576 aa20.01■□□□□ 0.79
APEX1-211ENST00000555839 VWDEQ8N2E2 1590 aa20.01■□□□□ 0.79
APEX1-211ENST00000555839 PKD2Q13563 968 aa20.01■□□□□ 0.79
APEX1-211ENST00000555839 STRCQ7RTU9 1775 aa20■□□□□ 0.79
APEX1-211ENST00000555839 NCKAP5LQ9HCH0 1330 aa19.99■□□□□ 0.79
APEX1-211ENST00000555839 PLA2R1Q13018 1463 aa19.99■□□□□ 0.79
APEX1-211ENST00000555839 CFAP65Q6ZU64 1925 aaKnown RBP19.98■□□□□ 0.79
APEX1-211ENST00000555839 FBXO41Q8TF61 875 aa19.98■□□□□ 0.79
APEX1-211ENST00000555839 PTPRTO14522 1441 aa19.98■□□□□ 0.79
APEX1-211ENST00000555839 NUP155O75694 1391 aa19.95■□□□□ 0.79
APEX1-211ENST00000555839 UGGT1Q9NYU2 1555 aa19.95■□□□□ 0.78
APEX1-211ENST00000555839 UNC13BO14795 1591 aa19.95■□□□□ 0.78
APEX1-211ENST00000555839 EFCAB6Q5THR3 1501 aa19.94■□□□□ 0.78
APEX1-211ENST00000555839 ANKLE2Q86XL3 938 aa19.94■□□□□ 0.78
APEX1-211ENST00000555839 NAIPQ13075 1403 aa19.93■□□□□ 0.78
APEX1-211ENST00000555839 RPRD2Q5VT52 1461 aaKnown RBP19.92■□□□□ 0.78
APEX1-211ENST00000555839 STAG3Q9UJ98 1225 aa19.92■□□□□ 0.78
APEX1-211ENST00000555839 SLC52A1Q9NWF4 448 aa19.91■□□□□ 0.78
APEX1-211ENST00000555839 TET3O43151 1660 aa19.91■□□□□ 0.78
APEX1-211ENST00000555839 IDI1Q13907 227 aa19.9■□□□□ 0.78
APEX1-211ENST00000555839 HFM1A2PYH4 1435 aa19.9■□□□□ 0.78
APEX1-211ENST00000555839 NOS1P29475 1434 aa19.9■□□□□ 0.78
APEX1-211ENST00000555839 IQGAP3Q86VI3 1631 aa19.87■□□□□ 0.77
APEX1-211ENST00000555839 CERKQ8TCT0 537 aa19.86■□□□□ 0.77
APEX1-211ENST00000555839 TRIM52Q96A61 297 aa19.86■□□□□ 0.77
APEX1-211ENST00000555839 GCC2Q8IWJ2 1684 aa19.86■□□□□ 0.77
APEX1-211ENST00000555839 EID1Q9Y6B2 187 aa19.84■□□□□ 0.77
APEX1-211ENST00000555839 UBR1Q8IWV7 1749 aa19.84■□□□□ 0.77
APEX1-211ENST00000555839 SYNMO15061 1565 aa19.83■□□□□ 0.77
APEX1-211ENST00000555839 TXNDC2Q86VQ3 553 aa19.83■□□□□ 0.77
APEX1-211ENST00000555839 PIK3C2BO00750 1634 aa19.82■□□□□ 0.76
APEX1-211ENST00000555839 POLR1AO95602 1720 aaPredicted RBP19.81■□□□□ 0.76
APEX1-211ENST00000555839 E9PCH4 1651 aa19.81■□□□□ 0.76
APEX1-211ENST00000555839 NPHP4O75161 1426 aaPredicted RBP19.8■□□□□ 0.76
APEX1-211ENST00000555839 TMEM2Q9UHN6 1383 aa19.8■□□□□ 0.76
APEX1-211ENST00000555839 MED14O60244 1454 aa19.79■□□□□ 0.76
APEX1-211ENST00000555839 KDM5AP29375 1690 aaKnown RBP19.79■□□□□ 0.76
APEX1-211ENST00000555839 SLIT1O75093 1534 aa19.79■□□□□ 0.76
APEX1-211ENST00000555839 NEURL4Q96JN8 1562 aa19.78■□□□□ 0.76
APEX1-211ENST00000555839 ACIN1Q9UKV3 1341 aaKnown RBP19.78■□□□□ 0.76
APEX1-211ENST00000555839 LTKP29376 864 aa19.78■□□□□ 0.76
APEX1-211ENST00000555839 ARHGAP23Q9P227 1491 aa19.78■□□□□ 0.76
APEX1-211ENST00000555839 ZNF335Q9H4Z2 1342 aaPredicted RBP19.77■□□□□ 0.76
APEX1-211ENST00000555839 CHGAP10645 457 aaKnown RBP19.77■□□□□ 0.76
APEX1-211ENST00000555839 HDGFP51858 240 aaKnown RBP19.77■□□□□ 0.76
APEX1-211ENST00000555839 SLC4A1APQ9BWU0 796 aaKnown RBP19.77■□□□□ 0.76
APEX1-211ENST00000555839 SCAF11Q99590 1463 aaKnown RBP19.77■□□□□ 0.76
APEX1-211ENST00000555839 ADGRB3O60242 1522 aa19.75■□□□□ 0.75
APEX1-211ENST00000555839 LTBP4Q8N2S1 1624 aa19.74■□□□□ 0.75
APEX1-211ENST00000555839 IQGAP1P46940 1657 aa19.72■□□□□ 0.75
APEX1-211ENST00000555839 SETD5Q9C0A6 1442 aa19.72■□□□□ 0.75
APEX1-211ENST00000555839 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.7■□□□□ 0.74
APEX1-211ENST00000555839 PPP1R15AO75807 674 aaPredicted RBP19.69■□□□□ 0.74
APEX1-211ENST00000555839 BCANQ96GW7 911 aa19.69■□□□□ 0.74
APEX1-211ENST00000555839 TMEM131LA2VDJ0 1609 aa19.69■□□□□ 0.74
APEX1-211ENST00000555839 MPHOSPH9Q99550 1183 aa19.68■□□□□ 0.74
APEX1-211ENST00000555839 SPHKAPQ2M3C7 1700 aa19.68■□□□□ 0.74
APEX1-211ENST00000555839 RIMS2Q9UQ26 1411 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms