RNA–Protein interactions for RNA: ENST00000555306.5

APEX1-209, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 898 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-209ENST00000555306 KDM5DQ9BY66 1539 aa17.8■□□□□ 0.44
APEX1-209ENST00000555306 KIF3BO15066 747 aa17.76■□□□□ 0.43
APEX1-209ENST00000555306 PPP6R1Q9UPN7 881 aa17.76■□□□□ 0.43
APEX1-209ENST00000555306 PRDM15P57071 1507 aaPredicted RBP17.76■□□□□ 0.43
APEX1-209ENST00000555306 VWDEQ8N2E2 1590 aa17.75■□□□□ 0.43
APEX1-209ENST00000555306 FAM135AQ9P2D6 1515 aa17.75■□□□□ 0.43
APEX1-209ENST00000555306 IQGAP3Q86VI3 1631 aa17.75■□□□□ 0.43
APEX1-209ENST00000555306 MROH1Q8NDA8 1641 aa17.74■□□□□ 0.43
APEX1-209ENST00000555306 NUP155O75694 1391 aa17.73■□□□□ 0.43
APEX1-209ENST00000555306 KANK1Q14678 1352 aa17.72■□□□□ 0.43
APEX1-209ENST00000555306 DHX57Q6P158 1386 aaKnown RBP17.72■□□□□ 0.43
APEX1-209ENST00000555306 TRIM52Q96A61 297 aa17.72■□□□□ 0.43
APEX1-209ENST00000555306 PZPP20742 1482 aa17.71■□□□□ 0.43
APEX1-209ENST00000555306 LMTK2Q8IWU2 1503 aa17.71■□□□□ 0.43
APEX1-209ENST00000555306 CLSPNQ9HAW4 1339 aa17.71■□□□□ 0.42
APEX1-209ENST00000555306 SIGLEC1Q9BZZ2 1709 aa17.7■□□□□ 0.42
APEX1-209ENST00000555306 MPHOSPH9Q99550 1183 aa17.7■□□□□ 0.42
APEX1-209ENST00000555306 ZC3H13Q5T200 1668 aaKnown RBP17.69■□□□□ 0.42
APEX1-209ENST00000555306 TET3O43151 1660 aa17.67■□□□□ 0.42
APEX1-209ENST00000555306 SLC4A1APQ9BWU0 796 aaKnown RBP17.66■□□□□ 0.42
APEX1-209ENST00000555306 GGT6Q6P531 493 aa17.65■□□□□ 0.42
APEX1-209ENST00000555306 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.65■□□□□ 0.421e-8■□□□□ 10
APEX1-209ENST00000555306 ABCC3O15438 1527 aa17.64■□□□□ 0.41
APEX1-209ENST00000555306 ARHGAP31Q2M1Z3 1444 aa17.63■□□□□ 0.41
APEX1-209ENST00000555306 RPRD2Q5VT52 1461 aaKnown RBP17.62■□□□□ 0.41
APEX1-209ENST00000555306 CEP152O94986 1710 aa17.61■□□□□ 0.41
APEX1-209ENST00000555306 CCER1Q8TC90 406 aaPredicted RBP17.61■□□□□ 0.41
APEX1-209ENST00000555306 ARID4BQ4LE39 1312 aaPredicted RBP17.61■□□□□ 0.41
APEX1-209ENST00000555306 WASHC2CQ9Y4E1 1318 aa17.61■□□□□ 0.41
APEX1-209ENST00000555306 CNTLNQ9NXG0 1405 aa17.61■□□□□ 0.41
APEX1-209ENST00000555306 EFCAB6Q5THR3 1501 aa17.61■□□□□ 0.41
APEX1-209ENST00000555306 PKD2Q13563 968 aa17.6■□□□□ 0.41
APEX1-209ENST00000555306 CAMSAP1Q5T5Y3 1602 aa17.59■□□□□ 0.41
APEX1-209ENST00000555306 MROH2AA6NES4 1674 aa17.58■□□□□ 0.41
APEX1-209ENST00000555306 E9PCH4 1651 aa17.58■□□□□ 0.41
APEX1-209ENST00000555306 ANKRD30BQ9BXX2 1392 aa17.57■□□□□ 0.4
APEX1-209ENST00000555306 PTPRTO14522 1441 aa17.55■□□□□ 0.4
APEX1-209ENST00000555306 CLTCQ00610 1675 aaKnown RBP17.55■□□□□ 0.4
APEX1-209ENST00000555306 ADAMTSL3P82987 1691 aa17.55■□□□□ 0.4
APEX1-209ENST00000555306 ESF1Q9H501 851 aaKnown RBP17.53■□□□□ 0.4
APEX1-209ENST00000555306 NPATQ14207 1427 aa17.53■□□□□ 0.4
APEX1-209ENST00000555306 FER1L4A9Z1Z3 1794 aa17.53■□□□□ 0.4
APEX1-209ENST00000555306 SPHKAPQ2M3C7 1700 aa17.52■□□□□ 0.4
APEX1-209ENST00000555306 MLECQ14165 292 aa17.52■□□□□ 0.4
APEX1-209ENST00000555306 TRPM2O94759 1503 aa17.51■□□□□ 0.39
APEX1-209ENST00000555306 PLA2R1Q13018 1463 aa17.5■□□□□ 0.39
APEX1-209ENST00000555306 NOS1P29475 1434 aa17.5■□□□□ 0.39
APEX1-209ENST00000555306 ZMYM3Q14202 1370 aa17.5■□□□□ 0.39
APEX1-209ENST00000555306 TIMELESSQ9UNS1 1208 aa17.49■□□□□ 0.39
APEX1-209ENST00000555306 FOXD1Q16676 465 aa17.48■□□□□ 0.39
APEX1-209ENST00000555306 PREX1Q8TCU6 1659 aa17.48■□□□□ 0.39
APEX1-209ENST00000555306 CFAP65Q6ZU64 1925 aaKnown RBP17.47■□□□□ 0.39
APEX1-209ENST00000555306 SPATA31D1Q6ZQQ2 1576 aa17.47■□□□□ 0.39
APEX1-209ENST00000555306 ZEB1P37275 1124 aaPredicted RBP17.46■□□□□ 0.39
APEX1-209ENST00000555306 MADDQ8WXG6 1647 aa17.46■□□□□ 0.39
APEX1-209ENST00000555306 NEURL4Q96JN8 1562 aa17.45■□□□□ 0.38
APEX1-209ENST00000555306 ERVK-7P63135 1459 aa17.45■□□□□ 0.38
APEX1-209ENST00000555306 CCDC144AA2RUR9 1427 aa17.45■□□□□ 0.38
APEX1-209ENST00000555306 SLC52A1Q9NWF4 448 aa17.44■□□□□ 0.38
APEX1-209ENST00000555306 C3P01024 1663 aa17.44■□□□□ 0.38
APEX1-209ENST00000555306 PIK3C2BO00750 1634 aa17.43■□□□□ 0.38
APEX1-209ENST00000555306 SYNMO15061 1565 aa17.42■□□□□ 0.38
APEX1-209ENST00000555306 RIMS1Q86UR5 1692 aaKnown RBP17.42■□□□□ 0.38
APEX1-209ENST00000555306 SIN3AQ96ST3 1273 aa17.41■□□□□ 0.38
APEX1-209ENST00000555306 SETD1BQ9UPS6 1966 aaKnown RBP17.4■□□□□ 0.38
APEX1-209ENST00000555306 CLTCL1P53675 1640 aa17.4■□□□□ 0.38
APEX1-209ENST00000555306 KIF1BO60333 1816 aa17.4■□□□□ 0.38
APEX1-209ENST00000555306 FBXO31Q5XUX0 539 aaPredicted RBP17.38■□□□□ 0.37
APEX1-209ENST00000555306 KDM5AP29375 1690 aaKnown RBP17.37■□□□□ 0.37
APEX1-209ENST00000555306 NEUROD1Q13562 356 aa17.36■□□□□ 0.37
APEX1-209ENST00000555306 TNRQ92752 1358 aa17.36■□□□□ 0.37
APEX1-209ENST00000555306 SPATA31E1Q6ZUB1 1445 aa17.36■□□□□ 0.37
APEX1-209ENST00000555306 STAC3Q96MF2 364 aa17.35■□□□□ 0.37
APEX1-209ENST00000555306 PTPRMP28827 1452 aa17.35■□□□□ 0.37
APEX1-209ENST00000555306 NLRP1Q9C000 1473 aa17.35■□□□□ 0.37
APEX1-209ENST00000555306 IDI1Q13907 227 aa17.34■□□□□ 0.37
APEX1-209ENST00000555306 TONSLQ96HA7 1378 aa17.34■□□□□ 0.37
APEX1-209ENST00000555306 UGGT1Q9NYU2 1555 aa17.32■□□□□ 0.36
APEX1-209ENST00000555306 ADGRB3O60242 1522 aa17.32■□□□□ 0.36
APEX1-209ENST00000555306 CEBPAP49715 358 aaPredicted RBP17.32■□□□□ 0.36
APEX1-209ENST00000555306 TMEM131LA2VDJ0 1609 aa17.32■□□□□ 0.36
APEX1-209ENST00000555306 RPGRIP1LQ68CZ1 1315 aa17.3■□□□□ 0.36
APEX1-209ENST00000555306 KDM4FA0A1W2PPD8 638 aa17.29■□□□□ 0.36
APEX1-209ENST00000555306 L3MBTL2Q969R5 705 aa17.29■□□□□ 0.36
APEX1-209ENST00000555306 PPP1R15AO75807 674 aaPredicted RBP17.27■□□□□ 0.36
APEX1-209ENST00000555306 IFT172Q9UG01 1749 aa17.27■□□□□ 0.35
APEX1-209ENST00000555306 MYO5BQ9ULV0 1848 aa17.26■□□□□ 0.35
APEX1-209ENST00000555306 A2ML1A8K2U0 1454 aa17.26■□□□□ 0.35
APEX1-209ENST00000555306 MYO3AQ8NEV4 1616 aa17.26■□□□□ 0.35
APEX1-209ENST00000555306 UBR1Q8IWV7 1749 aa17.26■□□□□ 0.35
APEX1-209ENST00000555306 ZNF142P52746 1687 aaPredicted RBP17.26■□□□□ 0.35
APEX1-209ENST00000555306 ZFYVE9O95405 1425 aa17.24■□□□□ 0.35
APEX1-209ENST00000555306 UHRF1BP1Q6BDS2 1440 aa17.24■□□□□ 0.35
APEX1-209ENST00000555306 PPLO60437 1756 aa17.24■□□□□ 0.35
APEX1-209ENST00000555306 RGL3Q3MIN7 710 aa17.23■□□□□ 0.35
APEX1-209ENST00000555306 MYOM2P54296 1465 aa17.23■□□□□ 0.35
APEX1-209ENST00000555306 CEP170BQ9Y4F5 1589 aaPredicted RBP17.22■□□□□ 0.35
APEX1-209ENST00000555306 NEXMIFQ5QGS0 1516 aa17.21■□□□□ 0.35
APEX1-209ENST00000555306 CHGAP10645 457 aaKnown RBP17.21■□□□□ 0.35
APEX1-209ENST00000555306 HDGFP51858 240 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms