RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 FAM135AQ9P2D6 1515 aa24.56■■□□□ 1.52
SPTLC2-203ENST00000554901 DEPDC5O75140 1603 aa24.56■■□□□ 1.52
SPTLC2-203ENST00000554901 PRDM15P57071 1507 aaPredicted RBP24.54■■□□□ 1.52
SPTLC2-203ENST00000554901 GGT6Q6P531 493 aa24.54■■□□□ 1.52
SPTLC2-203ENST00000554901 PCGF6Q9BYE7 350 aa24.53■■□□□ 1.52
SPTLC2-203ENST00000554901 RAB3GAP2Q9H2M9 1393 aa24.53■■□□□ 1.52
SPTLC2-203ENST00000554901 UNC13BO14795 1591 aa24.53■■□□□ 1.52
SPTLC2-203ENST00000554901 MROH1Q8NDA8 1641 aa24.51■■□□□ 1.51
SPTLC2-203ENST00000554901 KANK1Q14678 1352 aa24.51■■□□□ 1.51
SPTLC2-203ENST00000554901 KDM5DQ9BY66 1539 aa24.5■■□□□ 1.51
SPTLC2-203ENST00000554901 MLECQ14165 292 aa24.5■■□□□ 1.51
SPTLC2-203ENST00000554901 CNTLNQ9NXG0 1405 aa24.48■■□□□ 1.51
SPTLC2-203ENST00000554901 VWDEQ8N2E2 1590 aa24.47■■□□□ 1.51
SPTLC2-203ENST00000554901 ADAMTSL3P82987 1691 aa24.46■■□□□ 1.51
SPTLC2-203ENST00000554901 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.45■■□□□ 1.518e-9■□□□□ 9.3
SPTLC2-203ENST00000554901 ESF1Q9H501 851 aaKnown RBP24.45■■□□□ 1.51
SPTLC2-203ENST00000554901 NUP155O75694 1391 aa24.45■■□□□ 1.5
SPTLC2-203ENST00000554901 ZC3H13Q5T200 1668 aaKnown RBP24.45■■□□□ 1.5
SPTLC2-203ENST00000554901 WASHC2CQ9Y4E1 1318 aa24.45■■□□□ 1.5
SPTLC2-203ENST00000554901 LMTK2Q8IWU2 1503 aa24.44■■□□□ 1.5
SPTLC2-203ENST00000554901 ABCC3O15438 1527 aa24.42■■□□□ 1.5
SPTLC2-203ENST00000554901 IQGAP3Q86VI3 1631 aa24.42■■□□□ 1.5
SPTLC2-203ENST00000554901 TRIM52Q96A61 297 aa24.41■■□□□ 1.5
SPTLC2-203ENST00000554901 FER1L4A9Z1Z3 1794 aa24.39■■□□□ 1.5
SPTLC2-203ENST00000554901 MADDQ8WXG6 1647 aa24.39■■□□□ 1.49
SPTLC2-203ENST00000554901 MROH2AA6NES4 1674 aa24.38■■□□□ 1.49
SPTLC2-203ENST00000554901 ARHGAP31Q2M1Z3 1444 aa24.36■■□□□ 1.49
SPTLC2-203ENST00000554901 CLTCQ00610 1675 aaKnown RBP24.36■■□□□ 1.49
SPTLC2-203ENST00000554901 TET3O43151 1660 aa24.35■■□□□ 1.49
SPTLC2-203ENST00000554901 PZPP20742 1482 aa24.35■■□□□ 1.49
SPTLC2-203ENST00000554901 CEP152O94986 1710 aa24.34■■□□□ 1.49
SPTLC2-203ENST00000554901 ZMYM3Q14202 1370 aa24.34■■□□□ 1.49
SPTLC2-203ENST00000554901 EFCAB6Q5THR3 1501 aa24.33■■□□□ 1.49
SPTLC2-203ENST00000554901 CAMSAP1Q5T5Y3 1602 aa24.33■■□□□ 1.49
SPTLC2-203ENST00000554901 KDM4FA0A1W2PPD8 638 aa24.33■■□□□ 1.49
SPTLC2-203ENST00000554901 SLC4A1APQ9BWU0 796 aaKnown RBP24.33■■□□□ 1.49
SPTLC2-203ENST00000554901 RPRD2Q5VT52 1461 aaKnown RBP24.33■■□□□ 1.48
SPTLC2-203ENST00000554901 MPHOSPH9Q99550 1183 aa24.31■■□□□ 1.48
SPTLC2-203ENST00000554901 RIMS1Q86UR5 1692 aaKnown RBP24.3■■□□□ 1.48
SPTLC2-203ENST00000554901 PTPRMP28827 1452 aa24.28■■□□□ 1.48
SPTLC2-203ENST00000554901 NPATQ14207 1427 aa24.28■■□□□ 1.48
SPTLC2-203ENST00000554901 PKD2Q13563 968 aa24.25■■□□□ 1.47
SPTLC2-203ENST00000554901 C3P01024 1663 aa24.25■■□□□ 1.47
SPTLC2-203ENST00000554901 E9PCH4 1651 aa24.23■■□□□ 1.47
SPTLC2-203ENST00000554901 ERVK-7P63135 1459 aa24.2■■□□□ 1.47
SPTLC2-203ENST00000554901 NOS1P29475 1434 aa24.2■■□□□ 1.46
SPTLC2-203ENST00000554901 SPATA31D1Q6ZQQ2 1576 aa24.2■■□□□ 1.46
SPTLC2-203ENST00000554901 CEBPAP49715 358 aaPredicted RBP24.19■■□□□ 1.46
SPTLC2-203ENST00000554901 PTPRTO14522 1441 aa24.18■■□□□ 1.46
SPTLC2-203ENST00000554901 DHX57Q6P158 1386 aaKnown RBP24.17■■□□□ 1.46
SPTLC2-203ENST00000554901 PREX1Q8TCU6 1659 aa24.17■■□□□ 1.46
SPTLC2-203ENST00000554901 FBXO31Q5XUX0 539 aaPredicted RBP24.16■■□□□ 1.46
SPTLC2-203ENST00000554901 TNRQ92752 1358 aa24.14■■□□□ 1.46
SPTLC2-203ENST00000554901 SPHKAPQ2M3C7 1700 aa24.13■■□□□ 1.45
SPTLC2-203ENST00000554901 TRPM2O94759 1503 aa24.12■■□□□ 1.45
SPTLC2-203ENST00000554901 SETD1BQ9UPS6 1966 aaKnown RBP24.12■■□□□ 1.45
SPTLC2-203ENST00000554901 SLC52A1Q9NWF4 448 aa24.12■■□□□ 1.45
SPTLC2-203ENST00000554901 FOXD1Q16676 465 aa24.1■■□□□ 1.45
SPTLC2-203ENST00000554901 PLA2R1Q13018 1463 aa24.1■■□□□ 1.45
SPTLC2-203ENST00000554901 PLPPR3Q6T4P5 718 aa24.1■■□□□ 1.45
SPTLC2-203ENST00000554901 ANKRD30BQ9BXX2 1392 aa24.1■■□□□ 1.45
SPTLC2-203ENST00000554901 NLRP1Q9C000 1473 aa24.09■■□□□ 1.45
SPTLC2-203ENST00000554901 SYNMO15061 1565 aa24.09■■□□□ 1.45
SPTLC2-203ENST00000554901 CFAP65Q6ZU64 1925 aaKnown RBP24.08■■□□□ 1.45
SPTLC2-203ENST00000554901 PIK3C2BO00750 1634 aa24.06■■□□□ 1.44
SPTLC2-203ENST00000554901 CCDC144AA2RUR9 1427 aa24.05■■□□□ 1.44
SPTLC2-203ENST00000554901 CLSPNQ9HAW4 1339 aa24.05■■□□□ 1.44
SPTLC2-203ENST00000554901 IDI1Q13907 227 aa24.03■■□□□ 1.44
SPTLC2-203ENST00000554901 UHRF1BP1Q6BDS2 1440 aa24.03■■□□□ 1.44
SPTLC2-203ENST00000554901 MYO3AQ8NEV4 1616 aa24.02■■□□□ 1.44
SPTLC2-203ENST00000554901 A2ML1A8K2U0 1454 aa24.01■■□□□ 1.43
SPTLC2-203ENST00000554901 CLTCL1P53675 1640 aa24■■□□□ 1.43
SPTLC2-203ENST00000554901 UGGT1Q9NYU2 1555 aa23.99■■□□□ 1.43
SPTLC2-203ENST00000554901 KDM5AP29375 1690 aaKnown RBP23.99■■□□□ 1.43
SPTLC2-203ENST00000554901 ZNF142P52746 1687 aaPredicted RBP23.98■■□□□ 1.43
SPTLC2-203ENST00000554901 CEP170BQ9Y4F5 1589 aaPredicted RBP23.98■■□□□ 1.43
SPTLC2-203ENST00000554901 CCER1Q8TC90 406 aaPredicted RBP23.97■■□□□ 1.43
SPTLC2-203ENST00000554901 NEURL4Q96JN8 1562 aa23.96■■□□□ 1.43
SPTLC2-203ENST00000554901 ADGRB3O60242 1522 aa23.95■■□□□ 1.42
SPTLC2-203ENST00000554901 STAG3Q9UJ98 1225 aa23.94■■□□□ 1.42
SPTLC2-203ENST00000554901 THEMISQ8N1K5 641 aaPredicted RBP23.93■■□□□ 1.42
SPTLC2-203ENST00000554901 KIF1BO60333 1816 aa23.92■■□□□ 1.42
SPTLC2-203ENST00000554901 TMEM131LA2VDJ0 1609 aa23.92■■□□□ 1.42
SPTLC2-203ENST00000554901 AEBP2Q6ZN18 517 aaPredicted RBP23.9■■□□□ 1.42
SPTLC2-203ENST00000554901 UBR1Q8IWV7 1749 aa23.9■■□□□ 1.42
SPTLC2-203ENST00000554901 SPATA31E1Q6ZUB1 1445 aa23.9■■□□□ 1.42
SPTLC2-203ENST00000554901 LMTK3Q96Q04 1460 aa23.9■■□□□ 1.42
SPTLC2-203ENST00000554901 CHGAP10645 457 aaKnown RBP23.89■■□□□ 1.41
SPTLC2-203ENST00000554901 RPGRIP1LQ68CZ1 1315 aa23.85■■□□□ 1.41
SPTLC2-203ENST00000554901 SIN3AQ96ST3 1273 aa23.85■■□□□ 1.41
SPTLC2-203ENST00000554901 TMEM2Q9UHN6 1383 aa23.85■■□□□ 1.41
SPTLC2-203ENST00000554901 SLIT1O75093 1534 aa23.84■■□□□ 1.41
SPTLC2-203ENST00000554901 HDGFP51858 240 aaKnown RBP23.84■■□□□ 1.41
SPTLC2-203ENST00000554901 ARHGAP23Q9P227 1491 aa23.83■■□□□ 1.41
SPTLC2-203ENST00000554901 ZNF326Q5BKZ1 582 aaKnown RBP23.82■■□□□ 1.4
SPTLC2-203ENST00000554901 NEUROD1Q13562 356 aa23.81■■□□□ 1.4
SPTLC2-203ENST00000554901 STAC3Q96MF2 364 aa23.81■■□□□ 1.4
SPTLC2-203ENST00000554901 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.8■■□□□ 1.4
SPTLC2-203ENST00000554901 MYO5BQ9ULV0 1848 aa23.8■■□□□ 1.4
SPTLC2-203ENST00000554901 ZFYVE9O95405 1425 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms