RNA–Protein interactions for RNA: ENST00000554325.1

APEX1-207, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-207ENST00000554325 PLPPR3Q6T4P5 718 aa19.17■□□□□ 0.66
APEX1-207ENST00000554325 CNTLNQ9NXG0 1405 aa19.17■□□□□ 0.66
APEX1-207ENST00000554325 RNF17Q9BXT8 1623 aaKnown RBP19.15■□□□□ 0.66
APEX1-207ENST00000554325 PPP6R1Q9UPN7 881 aa19.15■□□□□ 0.66
APEX1-207ENST00000554325 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.14■□□□□ 0.651e-8■□□□□ 10
APEX1-207ENST00000554325 KANK1Q14678 1352 aa19.14■□□□□ 0.65
APEX1-207ENST00000554325 PTPRMP28827 1452 aa19.13■□□□□ 0.65
APEX1-207ENST00000554325 CLTCQ00610 1675 aaKnown RBP19.13■□□□□ 0.65
APEX1-207ENST00000554325 KDM5DQ9BY66 1539 aa19.12■□□□□ 0.65
APEX1-207ENST00000554325 FAM135AQ9P2D6 1515 aa19.12■□□□□ 0.65
APEX1-207ENST00000554325 WASHC2CQ9Y4E1 1318 aa19.12■□□□□ 0.65
APEX1-207ENST00000554325 GCC2Q8IWJ2 1684 aa19.11■□□□□ 0.65
APEX1-207ENST00000554325 MROH2AA6NES4 1674 aa19.1■□□□□ 0.65
APEX1-207ENST00000554325 ZC3H13Q5T200 1668 aaKnown RBP19.09■□□□□ 0.65
APEX1-207ENST00000554325 PRDM15P57071 1507 aaPredicted RBP19.09■□□□□ 0.65
APEX1-207ENST00000554325 DEPDC5O75140 1603 aa19.08■□□□□ 0.65
APEX1-207ENST00000554325 HFM1A2PYH4 1435 aa19.08■□□□□ 0.64
APEX1-207ENST00000554325 MROH1Q8NDA8 1641 aa19.06■□□□□ 0.64
APEX1-207ENST00000554325 NAIPQ13075 1403 aa19.06■□□□□ 0.64
APEX1-207ENST00000554325 CEP152O94986 1710 aa19.05■□□□□ 0.64
APEX1-207ENST00000554325 C3P01024 1663 aa19.05■□□□□ 0.64
APEX1-207ENST00000554325 ZMYM3Q14202 1370 aa19.05■□□□□ 0.64
APEX1-207ENST00000554325 ABCC3O15438 1527 aa19.05■□□□□ 0.64
APEX1-207ENST00000554325 UNC13BO14795 1591 aa19.03■□□□□ 0.64
APEX1-207ENST00000554325 CEBPAP49715 358 aaPredicted RBP19.03■□□□□ 0.64
APEX1-207ENST00000554325 CAMSAP1Q5T5Y3 1602 aa19.01■□□□□ 0.63
APEX1-207ENST00000554325 TRIM52Q96A61 297 aa19■□□□□ 0.63
APEX1-207ENST00000554325 NUP155O75694 1391 aa19■□□□□ 0.63
APEX1-207ENST00000554325 SETD5Q9C0A6 1442 aa18.98■□□□□ 0.63
APEX1-207ENST00000554325 PZPP20742 1482 aa18.97■□□□□ 0.63
APEX1-207ENST00000554325 VWDEQ8N2E2 1590 aa18.97■□□□□ 0.63
APEX1-207ENST00000554325 IQGAP3Q86VI3 1631 aa18.96■□□□□ 0.63
APEX1-207ENST00000554325 LMTK2Q8IWU2 1503 aa18.96■□□□□ 0.63
APEX1-207ENST00000554325 TRIM26Q12899 539 aaPredicted RBP18.96■□□□□ 0.63
APEX1-207ENST00000554325 NPATQ14207 1427 aa18.96■□□□□ 0.63
APEX1-207ENST00000554325 ACIN1Q9UKV3 1341 aaKnown RBP18.96■□□□□ 0.63
APEX1-207ENST00000554325 TET3O43151 1660 aa18.95■□□□□ 0.62
APEX1-207ENST00000554325 PREX1Q8TCU6 1659 aa18.94■□□□□ 0.62
APEX1-207ENST00000554325 EFCAB6Q5THR3 1501 aa18.94■□□□□ 0.62
APEX1-207ENST00000554325 UHRF1BP1Q6BDS2 1440 aa18.93■□□□□ 0.62
APEX1-207ENST00000554325 SETD1BQ9UPS6 1966 aaKnown RBP18.92■□□□□ 0.62
APEX1-207ENST00000554325 CFAP65Q6ZU64 1925 aaKnown RBP18.92■□□□□ 0.62
APEX1-207ENST00000554325 TNRQ92752 1358 aa18.92■□□□□ 0.62
APEX1-207ENST00000554325 ARHGAP31Q2M1Z3 1444 aa18.91■□□□□ 0.62
APEX1-207ENST00000554325 FBXO31Q5XUX0 539 aaPredicted RBP18.9■□□□□ 0.62
APEX1-207ENST00000554325 RAB3GAP2Q9H2M9 1393 aa18.9■□□□□ 0.62
APEX1-207ENST00000554325 ERVK-7P63135 1459 aa18.9■□□□□ 0.62
APEX1-207ENST00000554325 RPRD2Q5VT52 1461 aaKnown RBP18.89■□□□□ 0.61
APEX1-207ENST00000554325 MYO3AQ8NEV4 1616 aa18.89■□□□□ 0.61
APEX1-207ENST00000554325 SLC4A1APQ9BWU0 796 aaKnown RBP18.88■□□□□ 0.61
APEX1-207ENST00000554325 SPATA31D1Q6ZQQ2 1576 aa18.88■□□□□ 0.61
APEX1-207ENST00000554325 E9PCH4 1651 aa18.85■□□□□ 0.61
APEX1-207ENST00000554325 LMTK3Q96Q04 1460 aa18.84■□□□□ 0.61
APEX1-207ENST00000554325 NLRP1Q9C000 1473 aa18.84■□□□□ 0.61
APEX1-207ENST00000554325 CEP170BQ9Y4F5 1589 aaPredicted RBP18.82■□□□□ 0.6
APEX1-207ENST00000554325 PKD2Q13563 968 aa18.82■□□□□ 0.6
APEX1-207ENST00000554325 ZNF142P52746 1687 aaPredicted RBP18.82■□□□□ 0.6
APEX1-207ENST00000554325 STAG3Q9UJ98 1225 aa18.81■□□□□ 0.6
APEX1-207ENST00000554325 A2ML1A8K2U0 1454 aa18.81■□□□□ 0.6
APEX1-207ENST00000554325 HRCP23327 699 aa18.8■□□□□ 0.6
APEX1-207ENST00000554325 MPHOSPH9Q99550 1183 aa18.8■□□□□ 0.6
APEX1-207ENST00000554325 NOS1P29475 1434 aa18.79■□□□□ 0.6
APEX1-207ENST00000554325 SPHKAPQ2M3C7 1700 aa18.78■□□□□ 0.6
APEX1-207ENST00000554325 HSPA2P54652 639 aa18.78■□□□□ 0.6
APEX1-207ENST00000554325 SYNMO15061 1565 aa18.77■□□□□ 0.6
APEX1-207ENST00000554325 SLC52A1Q9NWF4 448 aa18.77■□□□□ 0.6
APEX1-207ENST00000554325 UGGT1Q9NYU2 1555 aa18.76■□□□□ 0.59
APEX1-207ENST00000554325 THEMISQ8N1K5 641 aaPredicted RBP18.75■□□□□ 0.59
APEX1-207ENST00000554325 CHGAP10645 457 aaKnown RBP18.74■□□□□ 0.59
APEX1-207ENST00000554325 PIK3C2BO00750 1634 aa18.74■□□□□ 0.59
APEX1-207ENST00000554325 PCGF6Q9BYE7 350 aa18.73■□□□□ 0.59
APEX1-207ENST00000554325 IDI1Q13907 227 aa18.72■□□□□ 0.59
APEX1-207ENST00000554325 FOXD1Q16676 465 aa18.72■□□□□ 0.59
APEX1-207ENST00000554325 ILDR1Q86SU0 546 aaPredicted RBP18.72■□□□□ 0.59
APEX1-207ENST00000554325 TRPM2O94759 1503 aa18.72■□□□□ 0.59
APEX1-207ENST00000554325 ADGRB3O60242 1522 aa18.71■□□□□ 0.59
APEX1-207ENST00000554325 UBR1Q8IWV7 1749 aa18.71■□□□□ 0.59
APEX1-207ENST00000554325 PTPRTO14522 1441 aa18.7■□□□□ 0.58
APEX1-207ENST00000554325 KDM5AP29375 1690 aaKnown RBP18.69■□□□□ 0.58
APEX1-207ENST00000554325 PLA2R1Q13018 1463 aa18.68■□□□□ 0.58
APEX1-207ENST00000554325 CCDC144AA2RUR9 1427 aa18.67■□□□□ 0.58
APEX1-207ENST00000554325 KIF1BO60333 1816 aa18.66■□□□□ 0.58
APEX1-207ENST00000554325 ANKLE2Q86XL3 938 aa18.66■□□□□ 0.58
APEX1-207ENST00000554325 CLTCL1P53675 1640 aa18.66■□□□□ 0.58
APEX1-207ENST00000554325 EID1Q9Y6B2 187 aa18.65■□□□□ 0.58
APEX1-207ENST00000554325 POLR1AO95602 1720 aaPredicted RBP18.64■□□□□ 0.57
APEX1-207ENST00000554325 ZNF326Q5BKZ1 582 aaKnown RBP18.64■□□□□ 0.57
APEX1-207ENST00000554325 DMRT2Q9Y5R5 561 aa18.64■□□□□ 0.57
APEX1-207ENST00000554325 TMEM131LA2VDJ0 1609 aa18.63■□□□□ 0.57
APEX1-207ENST00000554325 MYO5BQ9ULV0 1848 aa18.63■□□□□ 0.57
APEX1-207ENST00000554325 HDGFP51858 240 aaKnown RBP18.63■□□□□ 0.57
APEX1-207ENST00000554325 NCKAP5LQ9HCH0 1330 aa18.63■□□□□ 0.57
APEX1-207ENST00000554325 PPP1R15AO75807 674 aaPredicted RBP18.62■□□□□ 0.57
APEX1-207ENST00000554325 TMEM2Q9UHN6 1383 aa18.62■□□□□ 0.57
APEX1-207ENST00000554325 TXNDC2Q86VQ3 553 aa18.61■□□□□ 0.57
APEX1-207ENST00000554325 STRCQ7RTU9 1775 aa18.6■□□□□ 0.57
APEX1-207ENST00000554325 SLIT1O75093 1534 aa18.6■□□□□ 0.57
APEX1-207ENST00000554325 SCAF11Q99590 1463 aaKnown RBP18.59■□□□□ 0.57
APEX1-207ENST00000554325 BCANQ96GW7 911 aa18.59■□□□□ 0.57
APEX1-207ENST00000554325 RIMS2Q9UQ26 1411 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms