RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 RNF17Q9BXT8 1623 aaKnown RBP20.86■□□□□ 0.93
PRKCH-206ENST00000553830 NUP155O75694 1391 aa20.85■□□□□ 0.93
PRKCH-206ENST00000553830 ARID4BQ4LE39 1312 aaPredicted RBP20.85■□□□□ 0.93
PRKCH-206ENST00000553830 CCER1Q8TC90 406 aaPredicted RBP20.85■□□□□ 0.93
PRKCH-206ENST00000553830 CEP152O94986 1710 aa20.84■□□□□ 0.93
PRKCH-206ENST00000553830 BCORL1Q5H9F3 1711 aa20.84■□□□□ 0.93
PRKCH-206ENST00000553830 GGT6Q6P531 493 aa20.84■□□□□ 0.93
PRKCH-206ENST00000553830 MROH1Q8NDA8 1641 aa20.83■□□□□ 0.93
PRKCH-206ENST00000553830 MLECQ14165 292 aa20.83■□□□□ 0.93
PRKCH-206ENST00000553830 DHX57Q6P158 1386 aaKnown RBP20.83■□□□□ 0.92
PRKCH-206ENST00000553830 IQGAP3Q86VI3 1631 aa20.82■□□□□ 0.92
PRKCH-206ENST00000553830 PZPP20742 1482 aa20.81■□□□□ 0.92
PRKCH-206ENST00000553830 PRDM15P57071 1507 aaPredicted RBP20.8■□□□□ 0.92
PRKCH-206ENST00000553830 KDM5DQ9BY66 1539 aa20.8■□□□□ 0.92
PRKCH-206ENST00000553830 FAM135AQ9P2D6 1515 aa20.8■□□□□ 0.92
PRKCH-206ENST00000553830 SLC4A1APQ9BWU0 796 aaKnown RBP20.8■□□□□ 0.92
PRKCH-206ENST00000553830 KANK1Q14678 1352 aa20.8■□□□□ 0.92
PRKCH-206ENST00000553830 AGLP35573 1532 aa20.79■□□□□ 0.92
PRKCH-206ENST00000553830 MPHOSPH9Q99550 1183 aa20.78■□□□□ 0.92
PRKCH-206ENST00000553830 ACIN1Q9UKV3 1341 aaKnown RBP20.77■□□□□ 0.91
PRKCH-206ENST00000553830 FOXD1Q16676 465 aa20.76■□□□□ 0.91
PRKCH-206ENST00000553830 CFAP65Q6ZU64 1925 aaKnown RBP20.76■□□□□ 0.91
PRKCH-206ENST00000553830 VWDEQ8N2E2 1590 aa20.74■□□□□ 0.91
PRKCH-206ENST00000553830 TET3O43151 1660 aa20.73■□□□□ 0.91
PRKCH-206ENST00000553830 CLTCQ00610 1675 aaKnown RBP20.73■□□□□ 0.91
PRKCH-206ENST00000553830 PKD2Q13563 968 aa20.73■□□□□ 0.91
PRKCH-206ENST00000553830 ABCC3O15438 1527 aa20.72■□□□□ 0.91
PRKCH-206ENST00000553830 WASHC2CQ9Y4E1 1318 aa20.72■□□□□ 0.91
PRKCH-206ENST00000553830 CAMSAP1Q5T5Y3 1602 aa20.71■□□□□ 0.91
PRKCH-206ENST00000553830 E9PCH4 1651 aa20.71■□□□□ 0.91
PRKCH-206ENST00000553830 ZC3H13Q5T200 1668 aaKnown RBP20.71■□□□□ 0.91
PRKCH-206ENST00000553830 FER1L4A9Z1Z3 1794 aa20.69■□□□□ 0.9
PRKCH-206ENST00000553830 ESF1Q9H501 851 aaKnown RBP20.67■□□□□ 0.9
PRKCH-206ENST00000553830 EFCAB6Q5THR3 1501 aa20.67■□□□□ 0.9
PRKCH-206ENST00000553830 LMTK2Q8IWU2 1503 aa20.65■□□□□ 0.9
PRKCH-206ENST00000553830 SPHKAPQ2M3C7 1700 aa20.63■□□□□ 0.89
PRKCH-206ENST00000553830 RIMS1Q86UR5 1692 aaKnown RBP20.61■□□□□ 0.89
PRKCH-206ENST00000553830 NEUROD1Q13562 356 aa20.61■□□□□ 0.89
PRKCH-206ENST00000553830 PLPPR3Q6T4P5 718 aa20.61■□□□□ 0.89
PRKCH-206ENST00000553830 MADDQ8WXG6 1647 aa20.6■□□□□ 0.89
PRKCH-206ENST00000553830 SIN3AQ96ST3 1273 aa20.6■□□□□ 0.89
PRKCH-206ENST00000553830 PPP6R1Q9UPN7 881 aa20.58■□□□□ 0.89
PRKCH-206ENST00000553830 NPATQ14207 1427 aa20.58■□□□□ 0.88
PRKCH-206ENST00000553830 ANKRD30BQ9BXX2 1392 aa20.58■□□□□ 0.88
PRKCH-206ENST00000553830 MROH2AA6NES4 1674 aa20.57■□□□□ 0.88
PRKCH-206ENST00000553830 PREX1Q8TCU6 1659 aa20.57■□□□□ 0.88
PRKCH-206ENST00000553830 ADAMTSL3P82987 1691 aa20.56■□□□□ 0.88
PRKCH-206ENST00000553830 CLSPNQ9HAW4 1339 aa20.55■□□□□ 0.88
PRKCH-206ENST00000553830 RPRD2Q5VT52 1461 aaKnown RBP20.54■□□□□ 0.88
PRKCH-206ENST00000553830 C3P01024 1663 aa20.54■□□□□ 0.88
PRKCH-206ENST00000553830 CNTLNQ9NXG0 1405 aa20.53■□□□□ 0.88
PRKCH-206ENST00000553830 UGGT1Q9NYU2 1555 aa20.52■□□□□ 0.88
PRKCH-206ENST00000553830 PLA2R1Q13018 1463 aa20.52■□□□□ 0.88
PRKCH-206ENST00000553830 ZMYM3Q14202 1370 aa20.52■□□□□ 0.88
PRKCH-206ENST00000553830 FBXO31Q5XUX0 539 aaPredicted RBP20.52■□□□□ 0.88
PRKCH-206ENST00000553830 CLTCL1P53675 1640 aa20.52■□□□□ 0.88
PRKCH-206ENST00000553830 TRPM2O94759 1503 aa20.52■□□□□ 0.87
PRKCH-206ENST00000553830 CCDC144AA2RUR9 1427 aa20.51■□□□□ 0.87
PRKCH-206ENST00000553830 ARHGAP31Q2M1Z3 1444 aa20.51■□□□□ 0.87
PRKCH-206ENST00000553830 CEBPAP49715 358 aaPredicted RBP20.5■□□□□ 0.87
PRKCH-206ENST00000553830 SYNMO15061 1565 aa20.5■□□□□ 0.87
PRKCH-206ENST00000553830 ERVK-7P63135 1459 aa20.5■□□□□ 0.87
PRKCH-206ENST00000553830 KIF1BO60333 1816 aa20.48■□□□□ 0.87
PRKCH-206ENST00000553830 PTPRTO14522 1441 aa20.48■□□□□ 0.87
PRKCH-206ENST00000553830 NOS1P29475 1434 aa20.45■□□□□ 0.86
PRKCH-206ENST00000553830 SPATA31D1Q6ZQQ2 1576 aa20.45■□□□□ 0.86
PRKCH-206ENST00000553830 TONSLQ96HA7 1378 aa20.45■□□□□ 0.86
PRKCH-206ENST00000553830 CHGAP10645 457 aaKnown RBP20.44■□□□□ 0.86
PRKCH-206ENST00000553830 MYO5BQ9ULV0 1848 aa20.43■□□□□ 0.86
PRKCH-206ENST00000553830 ZEB1P37275 1124 aaPredicted RBP20.41■□□□□ 0.86
PRKCH-206ENST00000553830 PIK3C2BO00750 1634 aa20.41■□□□□ 0.86
PRKCH-206ENST00000553830 TNRQ92752 1358 aa20.4■□□□□ 0.86
PRKCH-206ENST00000553830 RGL3Q3MIN7 710 aa20.39■□□□□ 0.85
PRKCH-206ENST00000553830 PTPRMP28827 1452 aa20.37■□□□□ 0.85
PRKCH-206ENST00000553830 IDI1Q13907 227 aa20.36■□□□□ 0.85
PRKCH-206ENST00000553830 ZNF326Q5BKZ1 582 aaKnown RBP20.34■□□□□ 0.85
PRKCH-206ENST00000553830 L3MBTL2Q969R5 705 aa20.34■□□□□ 0.85
PRKCH-206ENST00000553830 SLC52A1Q9NWF4 448 aa20.34■□□□□ 0.85
PRKCH-206ENST00000553830 STAG3Q9UJ98 1225 aa20.34■□□□□ 0.85
PRKCH-206ENST00000553830 MYO3AQ8NEV4 1616 aa20.34■□□□□ 0.85
PRKCH-206ENST00000553830 ADGRB3O60242 1522 aa20.33■□□□□ 0.85
PRKCH-206ENST00000553830 KDM4FA0A1W2PPD8 638 aa20.33■□□□□ 0.85
PRKCH-206ENST00000553830 KDM2AQ9Y2K7 1162 aa20.32■□□□□ 0.84
PRKCH-206ENST00000553830 SPATA31E1Q6ZUB1 1445 aa20.32■□□□□ 0.84
PRKCH-206ENST00000553830 TMEM131LA2VDJ0 1609 aa20.31■□□□□ 0.84
PRKCH-206ENST00000553830 SETD1BQ9UPS6 1966 aaKnown RBP20.29■□□□□ 0.84
PRKCH-206ENST00000553830 DCAF11Q8TEB1 546 aa20.29■□□□□ 0.84
PRKCH-206ENST00000553830 UBR1Q8IWV7 1749 aa20.29■□□□□ 0.84
PRKCH-206ENST00000553830 IFT172Q9UG01 1749 aa20.28■□□□□ 0.84
PRKCH-206ENST00000553830 PPLO60437 1756 aa20.28■□□□□ 0.84
PRKCH-206ENST00000553830 NLRP1Q9C000 1473 aa20.27■□□□□ 0.84
PRKCH-206ENST00000553830 TIMELESSQ9UNS1 1208 aa20.27■□□□□ 0.84
PRKCH-206ENST00000553830 NUTM2DQ5VT03 806 aaPredicted RBP20.25■□□□□ 0.83
PRKCH-206ENST00000553830 NEURL4Q96JN8 1562 aa20.25■□□□□ 0.83
PRKCH-206ENST00000553830 CEP170BQ9Y4F5 1589 aaPredicted RBP20.25■□□□□ 0.83
PRKCH-206ENST00000553830 SENP3Q9H4L4 574 aaPredicted RBP20.24■□□□□ 0.83
PRKCH-206ENST00000553830 A2ML1A8K2U0 1454 aa20.24■□□□□ 0.83
PRKCH-206ENST00000553830 ZNF142P52746 1687 aaPredicted RBP20.23■□□□□ 0.83
PRKCH-206ENST00000553830 PPP1R15AO75807 674 aaPredicted RBP20.23■□□□□ 0.83
PRKCH-206ENST00000553830 NEXMIFQ5QGS0 1516 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms