RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 NISCHQ9Y2I1 1504 aa32.99■■■□□ 2.87
PRKCH-206ENST00000553830 CCDC180Q9P1Z9 1646 aa29.07■■■□□ 2.24
PRKCH-206ENST00000553830 ABCC9O60706 1549 aa27.96■■■□□ 2.07
PRKCH-206ENST00000553830 ZCCHC6Q5VYS8 1495 aaKnown RBP27.62■■■□□ 2.01
PRKCH-206ENST00000553830 DCAF8L2P0C7V8 631 aa27.51■■□□□ 1.99
PRKCH-206ENST00000553830 DCAF1Q9Y4B6 1507 aa27.21■■□□□ 1.95
PRKCH-206ENST00000553830 NACADO15069 1562 aa27.14■■□□□ 1.94
PRKCH-206ENST00000553830 RB1CC1Q8TDY2 1594 aa27.07■■□□□ 1.92
PRKCH-206ENST00000553830 MYO15BQ96JP2 1530 aa27.06■■□□□ 1.92
PRKCH-206ENST00000553830 SCRIBQ14160 1630 aa26.73■■□□□ 1.87
PRKCH-206ENST00000553830 SHROOM4Q9ULL8 1493 aa26.68■■□□□ 1.86
PRKCH-206ENST00000553830 UNC13AQ9UPW8 1703 aa26.61■■□□□ 1.85
PRKCH-206ENST00000553830 PABPN1Q86U42 306 aaKnown RBP eCLIP26.25■■□□□ 1.79
PRKCH-206ENST00000553830 BICRAQ9NZM4 1560 aa26.24■■□□□ 1.79
PRKCH-206ENST00000553830 CECR2Q9BXF3 1484 aa25.7■■□□□ 1.7
PRKCH-206ENST00000553830 BAZ1AQ9NRL2 1556 aaPredicted RBP25.53■■□□□ 1.68
PRKCH-206ENST00000553830 SMARCA4P51532 1647 aa25.53■■□□□ 1.68
PRKCH-206ENST00000553830 EIF4G1Q04637 1599 aaKnown RBP25.5■■□□□ 1.67
PRKCH-206ENST00000553830 MROH2BQ7Z745 1585 aa25.5■■□□□ 1.67
PRKCH-206ENST00000553830 SUPT5HO00267 1087 aaKnown RBP25.39■■□□□ 1.66
PRKCH-206ENST00000553830 RSF1Q96T23 1441 aaPredicted RBP25.37■■□□□ 1.65
PRKCH-206ENST00000553830 WIZO95785 1651 aa25.33■■□□□ 1.65
PRKCH-206ENST00000553830 CC2D2AQ9P2K1 1620 aa25.29■■□□□ 1.64
PRKCH-206ENST00000553830 ATAD2BQ9ULI0 1458 aa25.17■■□□□ 1.62
PRKCH-206ENST00000553830 SMARCA2P51531 1590 aa25.17■■□□□ 1.62
PRKCH-206ENST00000553830 PEG3Q9GZU2 1588 aa25.15■■□□□ 1.62
PRKCH-206ENST00000553830 BAZ1BQ9UIG0 1483 aaKnown RBP25.05■■□□□ 1.6
PRKCH-206ENST00000553830 DNAJC5BQ9UF47 199 aa25.03■■□□□ 1.6
PRKCH-206ENST00000553830 TOP2AP11388 1531 aaKnown RBP25.01■■□□□ 1.59
PRKCH-206ENST00000553830 NCAPD3P42695 1498 aa24.99■■□□□ 1.59
PRKCH-206ENST00000553830 HMGXB3Q12766 1538 aa24.97■■□□□ 1.59
PRKCH-206ENST00000553830 CCDC88BA6NC98 1476 aa24.71■■□□□ 1.55
PRKCH-206ENST00000553830 NESP48681 1621 aa24.38■■□□□ 1.49
PRKCH-206ENST00000553830 PRDM2Q13029 1718 aa24.35■■□□□ 1.49
PRKCH-206ENST00000553830 CADPSQ9ULU8 1353 aa24.34■■□□□ 1.49
PRKCH-206ENST00000553830 CFTRP13569 1480 aa24.32■■□□□ 1.48
PRKCH-206ENST00000553830 LAMC3Q9Y6N6 1575 aa24.3■■□□□ 1.48
PRKCH-206ENST00000553830 KIF21AQ7Z4S6 1674 aa24.16■■□□□ 1.46
PRKCH-206ENST00000553830 FANCD2Q9BXW9 1451 aa24.13■■□□□ 1.45
PRKCH-206ENST00000553830 ABCC8Q09428 1581 aa24.11■■□□□ 1.45
PRKCH-206ENST00000553830 PDS5BQ9NTI5 1447 aa24.1■■□□□ 1.45
PRKCH-206ENST00000553830 ERCC6Q03468 1493 aa24.04■■□□□ 1.44
PRKCH-206ENST00000553830 CEP164Q9UPV0 1460 aa24.04■■□□□ 1.44
PRKCH-206ENST00000553830 CHIC1Q5VXU3 224 aa23.96■■□□□ 1.43
PRKCH-206ENST00000553830 WRNQ14191 1432 aaPredicted RBP eCLIP23.94■■□□□ 1.42
PRKCH-206ENST00000553830 SYNJ1O43426 1573 aa23.91■■□□□ 1.42
PRKCH-206ENST00000553830 CUX1P39880 1505 aa23.89■■□□□ 1.41
PRKCH-206ENST00000553830 MRC2Q9UBG0 1479 aa23.87■■□□□ 1.41
PRKCH-206ENST00000553830 URB2Q14146 1524 aaKnown RBP23.86■■□□□ 1.41
PRKCH-206ENST00000553830 TRIM41Q8WV44 630 aa23.86■■□□□ 1.41
PRKCH-206ENST00000553830 DNMBPQ6XZF7 1577 aa23.84■■□□□ 1.41
PRKCH-206ENST00000553830 BIVM-ERCC5R4GMW8 1640 aa23.84■■□□□ 1.41
PRKCH-206ENST00000553830 THOC2Q8NI27 1593 aaKnown RBP23.83■■□□□ 1.41
PRKCH-206ENST00000553830 TOP2BQ02880 1626 aa23.82■■□□□ 1.4
PRKCH-206ENST00000553830 TOPBP1Q92547 1522 aa23.82■■□□□ 1.4
PRKCH-206ENST00000553830 WDR62O43379 1518 aa23.74■■□□□ 1.39
PRKCH-206ENST00000553830 FGD5Q6ZNL6 1462 aa23.72■■□□□ 1.39
PRKCH-206ENST00000553830 POLA1P09884 1462 aaPredicted RBP23.64■■□□□ 1.38
PRKCH-206ENST00000553830 RAD54L2Q9Y4B4 1467 aa23.6■■□□□ 1.37
PRKCH-206ENST00000553830 SOGA1O94964 1423 aa23.56■■□□□ 1.36
PRKCH-206ENST00000553830 CUX2O14529 1486 aa23.53■■□□□ 1.36
PRKCH-206ENST00000553830 WDR97A6NE52 1622 aa23.5■■□□□ 1.35
PRKCH-206ENST00000553830 TARBP1Q13395 1621 aaKnown RBP23.5■■□□□ 1.35
PRKCH-206ENST00000553830 FAM9AQ8IZU1 332 aaPredicted RBP23.49■■□□□ 1.35
PRKCH-206ENST00000553830 IFT140Q96RY7 1462 aa23.47■■□□□ 1.35
PRKCH-206ENST00000553830 RUSC2Q8N2Y8 1516 aa23.45■■□□□ 1.34
PRKCH-206ENST00000553830 ABCA10Q8WWZ4 1543 aa23.44■■□□□ 1.34
PRKCH-206ENST00000553830 TDRD9Q8NDG6 1382 aaKnown RBP23.39■■□□□ 1.33
PRKCH-206ENST00000553830 ZNF608Q9ULD9 1512 aaPredicted RBP23.38■■□□□ 1.33
PRKCH-206ENST00000553830 KIF27Q86VH2 1401 aa23.38■■□□□ 1.33
PRKCH-206ENST00000553830 ABCA5Q8WWZ7 1642 aa23.35■■□□□ 1.33
PRKCH-206ENST00000553830 EIF4G3O43432 1585 aaKnown RBP23.34■■□□□ 1.33
PRKCH-206ENST00000553830 AQRO60306 1485 aaKnown RBP eCLIP23.33■■□□□ 1.33
PRKCH-206ENST00000553830 PBRM1Q86U86 1689 aa23.32■■□□□ 1.32
PRKCH-206ENST00000553830 GAPVD1Q14C86 1478 aa23.3■■□□□ 1.32
PRKCH-206ENST00000553830 EEA1Q15075 1411 aa23.29■■□□□ 1.32
PRKCH-206ENST00000553830 EHMT2Q96KQ7 1210 aa23.25■■□□□ 1.31
PRKCH-206ENST00000553830 CSRNP3Q8WYN3 585 aa23.23■■□□□ 1.31
PRKCH-206ENST00000553830 GRIN2BQ13224 1484 aa23.19■■□□□ 1.3
PRKCH-206ENST00000553830 ERICH3Q5RHP9 1530 aa23.18■■□□□ 1.3
PRKCH-206ENST00000553830 IGF1RP08069 1367 aa23.17■■□□□ 1.3
PRKCH-206ENST00000553830 CUL7Q14999 1698 aa23.15■■□□□ 1.3
PRKCH-206ENST00000553830 SNAPC4Q5SXM2 1469 aa23.13■■□□□ 1.29
PRKCH-206ENST00000553830 ADAMTS12P58397 1594 aa23.1■■□□□ 1.29
PRKCH-206ENST00000553830 KIF21BO75037 1637 aa23.09■■□□□ 1.29
PRKCH-206ENST00000553830 CARMIL1Q5VZK9 1371 aa23.09■■□□□ 1.29
PRKCH-206ENST00000553830 LOC105371045A0A1W2PR82 267 aa23.07■■□□□ 1.28
PRKCH-206ENST00000553830 MAGI1Q96QZ7 1491 aaPredicted RBP23.05■■□□□ 1.28
PRKCH-206ENST00000553830 PRXQ9BXM0 1461 aa23.05■■□□□ 1.28
PRKCH-206ENST00000553830 RAPGEF2Q9Y4G8 1499 aa23.05■■□□□ 1.28
PRKCH-206ENST00000553830 FHAD1B1AJZ9 1412 aa23.02■■□□□ 1.28
PRKCH-206ENST00000553830 GOLGA3Q08378 1498 aa23.01■■□□□ 1.27
PRKCH-206ENST00000553830 CHD1O14646 1710 aa23■■□□□ 1.27
PRKCH-206ENST00000553830 FBLN2P98095 1184 aa23■■□□□ 1.27
PRKCH-206ENST00000553830 UBTFP17480 764 aaKnown RBP22.96■■□□□ 1.27
PRKCH-206ENST00000553830 SYNJ2O15056 1496 aa22.96■■□□□ 1.27
PRKCH-206ENST00000553830 CHMP7Q8WUX9 453 aaPredicted RBP22.95■■□□□ 1.26
PRKCH-206ENST00000553830 GRIN2AQ12879 1464 aa22.92■■□□□ 1.26
PRKCH-206ENST00000553830 CTTNBP2Q8WZ74 1663 aa22.88■■□□□ 1.25
PRKCH-206ENST00000553830 RANGAP1P46060 587 aaPredicted RBP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms