RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 HECW2Q9P2P5 1572 aa28.16■■■□□ 2.1
RBFOX1-215ENST00000553186 PPRC1Q5VV67 1664 aaKnown RBP28.15■■■□□ 2.1
RBFOX1-215ENST00000553186 DEPDC5O75140 1603 aa28.12■■■□□ 2.09
RBFOX1-215ENST00000553186 EIF2AK4Q9P2K8 1649 aaKnown RBP28.12■■■□□ 2.09
RBFOX1-215ENST00000553186 RICTORQ6R327 1708 aa28.12■■■□□ 2.09
RBFOX1-215ENST00000553186 A2MP01023 1474 aa28.11■■■□□ 2.09
RBFOX1-215ENST00000553186 TEX14Q8IWB6 1497 aa28.11■■■□□ 2.09
RBFOX1-215ENST00000553186 L3MBTL2Q969R5 705 aa28.1■■■□□ 2.09
RBFOX1-215ENST00000553186 KIF3BO15066 747 aa28.09■■■□□ 2.09
RBFOX1-215ENST00000553186 KIF13AQ9H1H9 1805 aa28.09■■■□□ 2.09
RBFOX1-215ENST00000553186 FRMPD1Q5SYB0 1578 aa28.07■■■□□ 2.08
RBFOX1-215ENST00000553186 TSPOAP1O95153 1857 aa28.07■■■□□ 2.08
RBFOX1-215ENST00000553186 ABCA6Q8N139 1617 aa28.06■■■□□ 2.08
RBFOX1-215ENST00000553186 VWDEQ8N2E2 1590 aa28.05■■■□□ 2.08
RBFOX1-215ENST00000553186 PLA2R1Q13018 1463 aa28.04■■■□□ 2.08
RBFOX1-215ENST00000553186 MROH1Q8NDA8 1641 aa28.04■■■□□ 2.08
RBFOX1-215ENST00000553186 PRDM15P57071 1507 aaPredicted RBP28.03■■■□□ 2.08
RBFOX1-215ENST00000553186 DIP2CQ9Y2E4 1556 aa28.01■■■□□ 2.07
RBFOX1-215ENST00000553186 ZMYM4Q5VZL5 1548 aa28■■■□□ 2.07
RBFOX1-215ENST00000553186 ATP10AO60312 1499 aa28■■■□□ 2.07
RBFOX1-215ENST00000553186 KANK1Q14678 1352 aa27.99■■■□□ 2.07
RBFOX1-215ENST00000553186 YEATS2Q9ULM3 1422 aa27.98■■■□□ 2.07
RBFOX1-215ENST00000553186 RNF17Q9BXT8 1623 aaKnown RBP27.97■■■□□ 2.07
RBFOX1-215ENST00000553186 DIEXFQ68CQ4 756 aaKnown RBP27.96■■■□□ 2.07
RBFOX1-215ENST00000553186 BCORL1Q5H9F3 1711 aa27.95■■■□□ 2.07
RBFOX1-215ENST00000553186 CCDC144AA2RUR9 1427 aa27.95■■■□□ 2.06
RBFOX1-215ENST00000553186 TET3O43151 1660 aa27.94■■■□□ 2.06
RBFOX1-215ENST00000553186 E9PCH4 1651 aa27.93■■■□□ 2.06
RBFOX1-215ENST00000553186 COL17A1Q9UMD9 1497 aaPredicted RBP27.92■■■□□ 2.06
RBFOX1-215ENST00000553186 NBPF8Q3BBV2 869 aa27.91■■■□□ 2.06
RBFOX1-215ENST00000553186 LMTK2Q8IWU2 1503 aa27.9■■■□□ 2.06
RBFOX1-215ENST00000553186 PTPRTO14522 1441 aa27.89■■■□□ 2.05
RBFOX1-215ENST00000553186 GGT6Q6P531 493 aa27.86■■■□□ 2.05
RBFOX1-215ENST00000553186 EFCAB6Q5THR3 1501 aa27.84■■■□□ 2.05
RBFOX1-215ENST00000553186 TRPM2O94759 1503 aa27.84■■■□□ 2.05
RBFOX1-215ENST00000553186 DNAJC5Q9H3Z4 198 aa27.83■■■□□ 2.05
RBFOX1-215ENST00000553186 UHRF1BP1Q6BDS2 1440 aa27.81■■■□□ 2.04
RBFOX1-215ENST00000553186 SPHKAPQ2M3C7 1700 aa27.79■■■□□ 2.04
RBFOX1-215ENST00000553186 CEP152O94986 1710 aa27.79■■■□□ 2.04
RBFOX1-215ENST00000553186 ABCC3O15438 1527 aa27.78■■■□□ 2.04
RBFOX1-215ENST00000553186 REREQ9P2R6 1566 aa27.78■■■□□ 2.04
RBFOX1-215ENST00000553186 WASHC2CQ9Y4E1 1318 aa27.77■■■□□ 2.04
RBFOX1-215ENST00000553186 HIRIP3Q9BW71 556 aaPredicted RBP27.77■■■□□ 2.04
RBFOX1-215ENST00000553186 DCAF11Q8TEB1 546 aa27.76■■■□□ 2.03
RBFOX1-215ENST00000553186 SPATA31E1Q6ZUB1 1445 aa27.76■■■□□ 2.03
RBFOX1-215ENST00000553186 NPATQ14207 1427 aa27.75■■■□□ 2.03
RBFOX1-215ENST00000553186 RGL3Q3MIN7 710 aa27.75■■■□□ 2.03
RBFOX1-215ENST00000553186 KDM2AQ9Y2K7 1162 aa27.72■■■□□ 2.03
RBFOX1-215ENST00000553186 CLTCL1P53675 1640 aa27.72■■■□□ 2.03
RBFOX1-215ENST00000553186 AGLP35573 1532 aa27.72■■■□□ 2.03
RBFOX1-215ENST00000553186 ZNF326Q5BKZ1 582 aaKnown RBP27.71■■■□□ 2.03
RBFOX1-215ENST00000553186 ARHGEF40Q8TER5 1519 aa27.71■■■□□ 2.03
RBFOX1-215ENST00000553186 HSPA5P11021 654 aaKnown RBP27.69■■■□□ 2.02
RBFOX1-215ENST00000553186 EIF4G2P78344 907 aaKnown RBP eCLIP27.69■■■□□ 2.02
RBFOX1-215ENST00000553186 RALGAPBQ86X10 1494 aa27.67■■■□□ 2.02
RBFOX1-215ENST00000553186 CAMSAP1Q5T5Y3 1602 aa27.67■■■□□ 2.02
RBFOX1-215ENST00000553186 TRHP20396 242 aaPredicted RBP27.66■■■□□ 2.02
RBFOX1-215ENST00000553186 ARHGAP31Q2M1Z3 1444 aa27.66■■■□□ 2.02
RBFOX1-215ENST00000553186 PRAG1Q86YV5 1406 aa27.66■■■□□ 2.02
RBFOX1-215ENST00000553186 ZC3H13Q5T200 1668 aaKnown RBP27.66■■■□□ 2.02
RBFOX1-215ENST00000553186 UGGT1Q9NYU2 1555 aa27.65■■■□□ 2.02
RBFOX1-215ENST00000553186 SIGLEC1Q9BZZ2 1709 aa27.64■■■□□ 2.02
RBFOX1-215ENST00000553186 NEURL4Q96JN8 1562 aa27.63■■■□□ 2.01
RBFOX1-215ENST00000553186 CNTLNQ9NXG0 1405 aa27.63■■■□□ 2.01
RBFOX1-215ENST00000553186 NOS1P29475 1434 aa27.62■■■□□ 2.01
RBFOX1-215ENST00000553186 PPP6R1Q9UPN7 881 aa27.6■■■□□ 2.01
RBFOX1-215ENST00000553186 STAC3Q96MF2 364 aa27.55■■■□□ 2
RBFOX1-215ENST00000553186 USP47Q96K76 1375 aa27.54■■■□□ 2
RBFOX1-215ENST00000553186 MIER1Q8N108 512 aa27.54■■■□□ 2
RBFOX1-215ENST00000553186 TRPM1Q7Z4N2 1603 aa27.54■■■□□ 2
RBFOX1-215ENST00000553186 DDX10Q13206 875 aaKnown RBP27.53■■■□□ 2
RBFOX1-215ENST00000553186 CARD11Q9BXL7 1154 aa27.53■■■□□ 2
RBFOX1-215ENST00000553186 CFAP65Q6ZU64 1925 aaKnown RBP27.52■■■□□ 2
RBFOX1-215ENST00000553186 ROCK2O75116 1388 aaKnown RBP27.52■■■□□ 2
RBFOX1-215ENST00000553186 SYNMO15061 1565 aa27.51■■■□□ 2
RBFOX1-215ENST00000553186 ADGRB3O60242 1522 aa27.5■■□□□ 1.99
RBFOX1-215ENST00000553186 GPRASP1Q5JY77 1395 aa27.5■■□□□ 1.99
RBFOX1-215ENST00000553186 KIF1BO60333 1816 aa27.5■■□□□ 1.99
RBFOX1-215ENST00000553186 WASHC2AQ641Q2 1341 aa27.49■■□□□ 1.99
RBFOX1-215ENST00000553186 NBPF1Q3BBV0 1214 aa27.49■■□□□ 1.99
RBFOX1-215ENST00000553186 PIK3C2BO00750 1634 aa27.49■■□□□ 1.99
RBFOX1-215ENST00000553186 MADDQ8WXG6 1647 aa27.48■■□□□ 1.99
RBFOX1-215ENST00000553186 MLECQ14165 292 aa27.48■■□□□ 1.99
RBFOX1-215ENST00000553186 MROH2AA6NES4 1674 aa27.47■■□□□ 1.99
RBFOX1-215ENST00000553186 C11orf95C9JLR9 678 aaPredicted RBP27.46■■□□□ 1.99
RBFOX1-215ENST00000553186 MYOM2P54296 1465 aa27.44■■□□□ 1.98
RBFOX1-215ENST00000553186 PREX1Q8TCU6 1659 aa27.44■■□□□ 1.98
RBFOX1-215ENST00000553186 SLC52A1Q9NWF4 448 aa27.43■■□□□ 1.98
RBFOX1-215ENST00000553186 CLTCQ00610 1675 aaKnown RBP27.43■■□□□ 1.98
RBFOX1-215ENST00000553186 FBXO31Q5XUX0 539 aaPredicted RBP27.43■■□□□ 1.98
RBFOX1-215ENST00000553186 IDI1Q13907 227 aa27.42■■□□□ 1.98
RBFOX1-215ENST00000553186 ERVK-7P63135 1459 aa27.42■■□□□ 1.98
RBFOX1-215ENST00000553186 CHGAP10645 457 aaKnown RBP27.42■■□□□ 1.98
RBFOX1-215ENST00000553186 LAMC1P11047 1609 aa27.41■■□□□ 1.98
RBFOX1-215ENST00000553186 CCDC7Q96M83 1385 aa27.4■■□□□ 1.98
RBFOX1-215ENST00000553186 IFT172Q9UG01 1749 aa27.4■■□□□ 1.98
RBFOX1-215ENST00000553186 ARID4BQ4LE39 1312 aaPredicted RBP27.39■■□□□ 1.98
RBFOX1-215ENST00000553186 ADGRF5Q8IZF2 1346 aa27.38■■□□□ 1.97
RBFOX1-215ENST00000553186 NRXN1Q9ULB1 1477 aa27.38■■□□□ 1.97
RBFOX1-215ENST00000553186 ST20-MTHFSA0A0A6YYL1 179 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms