RNA–Protein interactions for RNA: ENST00000553038.5

ACTR6-213, Transcript of ARP6 actin related protein 6 homolog, humanhuman

TSL 1 (best)

Gene ACTR6, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR6-213ENST00000553038 KIF3BO15066 747 aa20.18■□□□□ 0.82
ACTR6-213ENST00000553038 ANKRD30BQ9BXX2 1392 aa20.18■□□□□ 0.82
ACTR6-213ENST00000553038 DHX29Q7Z478 1369 aaKnown RBP20.17■□□□□ 0.82
ACTR6-213ENST00000553038 MLH3Q9UHC1 1453 aa20.16■□□□□ 0.82
ACTR6-213ENST00000553038 KIF13AQ9H1H9 1805 aa20.16■□□□□ 0.82
ACTR6-213ENST00000553038 A2MP01023 1474 aa20.14■□□□□ 0.82
ACTR6-213ENST00000553038 KANK1Q14678 1352 aa20.14■□□□□ 0.82
ACTR6-213ENST00000553038 PPRC1Q5VV67 1664 aaKnown RBP20.14■□□□□ 0.81
ACTR6-213ENST00000553038 RICTORQ6R327 1708 aa20.13■□□□□ 0.81
ACTR6-213ENST00000553038 IQGAP3Q86VI3 1631 aa20.12■□□□□ 0.81
ACTR6-213ENST00000553038 TRHP20396 242 aaPredicted RBP20.1■□□□□ 0.81
ACTR6-213ENST00000553038 ABCA6Q8N139 1617 aa20.1■□□□□ 0.81
ACTR6-213ENST00000553038 EIF2AK4Q9P2K8 1649 aaKnown RBP20.1■□□□□ 0.81
ACTR6-213ENST00000553038 MAGI2Q86UL8 1455 aa20.1■□□□□ 0.81
ACTR6-213ENST00000553038 RPRD2Q5VT52 1461 aaKnown RBP20.09■□□□□ 0.81
ACTR6-213ENST00000553038 DNAJC5Q9H3Z4 198 aa20.08■□□□□ 0.8
ACTR6-213ENST00000553038 FRMPD1Q5SYB0 1578 aa20.07■□□□□ 0.8
ACTR6-213ENST00000553038 GGT6Q6P531 493 aa20.06■□□□□ 0.8
ACTR6-213ENST00000553038 DEPDC5O75140 1603 aa20.06■□□□□ 0.8
ACTR6-213ENST00000553038 L3MBTL2Q969R5 705 aa20.05■□□□□ 0.8
ACTR6-213ENST00000553038 DIP2CQ9Y2E4 1556 aa20.05■□□□□ 0.8
ACTR6-213ENST00000553038 YEATS2Q9ULM3 1422 aa20.05■□□□□ 0.8
ACTR6-213ENST00000553038 CCDC144AA2RUR9 1427 aa20.02■□□□□ 0.8
ACTR6-213ENST00000553038 ZMYM4Q5VZL5 1548 aa20.02■□□□□ 0.8
ACTR6-213ENST00000553038 SCAF1Q9H7N4 1312 aaKnown RBP20.02■□□□□ 0.8
ACTR6-213ENST00000553038 PRDM15P57071 1507 aaPredicted RBP20.01■□□□□ 0.79
ACTR6-213ENST00000553038 HIRIP3Q9BW71 556 aaPredicted RBP20.01■□□□□ 0.79
ACTR6-213ENST00000553038 MIER1Q8N108 512 aa19.98■□□□□ 0.79
ACTR6-213ENST00000553038 MROH1Q8NDA8 1641 aa19.98■□□□□ 0.79
ACTR6-213ENST00000553038 RNF17Q9BXT8 1623 aaKnown RBP19.98■□□□□ 0.79
ACTR6-213ENST00000553038 TET3O43151 1660 aa19.98■□□□□ 0.79
ACTR6-213ENST00000553038 ZNF326Q5BKZ1 582 aaKnown RBP19.97■□□□□ 0.79
ACTR6-213ENST00000553038 WASHC2CQ9Y4E1 1318 aa19.96■□□□□ 0.79
ACTR6-213ENST00000553038 E9PCH4 1651 aa19.96■□□□□ 0.79
ACTR6-213ENST00000553038 ATP10AO60312 1499 aa19.96■□□□□ 0.79
ACTR6-213ENST00000553038 VWDEQ8N2E2 1590 aa19.95■□□□□ 0.78
ACTR6-213ENST00000553038 COL17A1Q9UMD9 1497 aaPredicted RBP19.95■□□□□ 0.78
ACTR6-213ENST00000553038 NBPF8Q3BBV2 869 aa19.94■□□□□ 0.78
ACTR6-213ENST00000553038 CEP152O94986 1710 aa19.94■□□□□ 0.78
ACTR6-213ENST00000553038 PLA2R1Q13018 1463 aa19.93■□□□□ 0.78
ACTR6-213ENST00000553038 RGL3Q3MIN7 710 aa19.93■□□□□ 0.78
ACTR6-213ENST00000553038 KDM2AQ9Y2K7 1162 aa19.92■□□□□ 0.78
ACTR6-213ENST00000553038 BCORL1Q5H9F3 1711 aa19.92■□□□□ 0.78
ACTR6-213ENST00000553038 EFCAB6Q5THR3 1501 aa19.9■□□□□ 0.78
ACTR6-213ENST00000553038 DCAF11Q8TEB1 546 aa19.9■□□□□ 0.78
ACTR6-213ENST00000553038 SPHKAPQ2M3C7 1700 aa19.89■□□□□ 0.77
ACTR6-213ENST00000553038 LMTK2Q8IWU2 1503 aa19.88■□□□□ 0.77
ACTR6-213ENST00000553038 ABCC3O15438 1527 aa19.87■□□□□ 0.77
ACTR6-213ENST00000553038 TRPM2O94759 1503 aa19.87■□□□□ 0.77
ACTR6-213ENST00000553038 ARHGEF40Q8TER5 1519 aa19.87■□□□□ 0.77
ACTR6-213ENST00000553038 MLECQ14165 292 aa19.86■□□□□ 0.77
ACTR6-213ENST00000553038 ARID4BQ4LE39 1312 aaPredicted RBP19.85■□□□□ 0.77
ACTR6-213ENST00000553038 PTPRTO14522 1441 aa19.85■□□□□ 0.77
ACTR6-213ENST00000553038 HSPA5P11021 654 aaKnown RBP19.83■□□□□ 0.77
ACTR6-213ENST00000553038 DDX10Q13206 875 aaKnown RBP19.83■□□□□ 0.77
ACTR6-213ENST00000553038 REREQ9P2R6 1566 aa19.83■□□□□ 0.77
ACTR6-213ENST00000553038 CAMSAP1Q5T5Y3 1602 aa19.83■□□□□ 0.76
ACTR6-213ENST00000553038 CLTCL1P53675 1640 aa19.82■□□□□ 0.76
ACTR6-213ENST00000553038 NPATQ14207 1427 aa19.82■□□□□ 0.76
ACTR6-213ENST00000553038 ZC3H13Q5T200 1668 aaKnown RBP19.81■□□□□ 0.76
ACTR6-213ENST00000553038 CHGAP10645 457 aaKnown RBP19.81■□□□□ 0.76
ACTR6-213ENST00000553038 AGLP35573 1532 aa19.8■□□□□ 0.76
ACTR6-213ENST00000553038 ESF1Q9H501 851 aaKnown RBP19.8■□□□□ 0.76
ACTR6-213ENST00000553038 EIF4G2P78344 907 aaKnown RBP eCLIP19.8■□□□□ 0.76
ACTR6-213ENST00000553038 CFAP65Q6ZU64 1925 aaKnown RBP19.79■□□□□ 0.76
ACTR6-213ENST00000553038 UGGT1Q9NYU2 1555 aa19.78■□□□□ 0.76
ACTR6-213ENST00000553038 UHRF1BP1Q6BDS2 1440 aa19.76■□□□□ 0.75
ACTR6-213ENST00000553038 SPATA31E1Q6ZUB1 1445 aa19.75■□□□□ 0.75
ACTR6-213ENST00000553038 CNTLNQ9NXG0 1405 aa19.75■□□□□ 0.75
ACTR6-213ENST00000553038 SIGLEC1Q9BZZ2 1709 aa19.75■□□□□ 0.75
ACTR6-213ENST00000553038 PPP6R1Q9UPN7 881 aa19.75■□□□□ 0.75
ACTR6-213ENST00000553038 CARD11Q9BXL7 1154 aa19.73■□□□□ 0.75
ACTR6-213ENST00000553038 KIF1BO60333 1816 aa19.72■□□□□ 0.75
ACTR6-213ENST00000553038 ARHGAP31Q2M1Z3 1444 aa19.72■□□□□ 0.75
ACTR6-213ENST00000553038 PRAG1Q86YV5 1406 aa19.72■□□□□ 0.75
ACTR6-213ENST00000553038 CLTCQ00610 1675 aaKnown RBP19.72■□□□□ 0.75
ACTR6-213ENST00000553038 ROCK2O75116 1388 aaKnown RBP19.72■□□□□ 0.75
ACTR6-213ENST00000553038 RALGAPBQ86X10 1494 aa19.71■□□□□ 0.75
ACTR6-213ENST00000553038 C11orf95C9JLR9 678 aaPredicted RBP19.7■□□□□ 0.74
ACTR6-213ENST00000553038 WASHC2AQ641Q2 1341 aa19.69■□□□□ 0.74
ACTR6-213ENST00000553038 CENPBP07199 599 aaPredicted RBP19.69■□□□□ 0.74
ACTR6-213ENST00000553038 NOS1P29475 1434 aa19.68■□□□□ 0.74
ACTR6-213ENST00000553038 YTHDC1Q96MU7 727 aaKnown RBP19.68■□□□□ 0.74
ACTR6-213ENST00000553038 FBXO31Q5XUX0 539 aaPredicted RBP19.67■□□□□ 0.74
ACTR6-213ENST00000553038 USP47Q96K76 1375 aa19.67■□□□□ 0.74
ACTR6-213ENST00000553038 PREX1Q8TCU6 1659 aa19.66■□□□□ 0.74
ACTR6-213ENST00000553038 SYNMO15061 1565 aa19.66■□□□□ 0.74
ACTR6-213ENST00000553038 MROH2AA6NES4 1674 aa19.65■□□□□ 0.74
ACTR6-213ENST00000553038 STAC3Q96MF2 364 aa19.64■□□□□ 0.74
ACTR6-213ENST00000553038 SLC52A1Q9NWF4 448 aa19.64■□□□□ 0.73
ACTR6-213ENST00000553038 TRPM1Q7Z4N2 1603 aa19.64■□□□□ 0.73
ACTR6-213ENST00000553038 ADGRB3O60242 1522 aa19.64■□□□□ 0.73
ACTR6-213ENST00000553038 NEURL4Q96JN8 1562 aa19.63■□□□□ 0.73
ACTR6-213ENST00000553038 STAG3Q9UJ98 1225 aa19.63■□□□□ 0.73
ACTR6-213ENST00000553038 ERVK-7P63135 1459 aa19.63■□□□□ 0.73
ACTR6-213ENST00000553038 IDI1Q13907 227 aa19.63■□□□□ 0.73
ACTR6-213ENST00000553038 NBPF1Q3BBV0 1214 aa19.62■□□□□ 0.73
ACTR6-213ENST00000553038 ZMYM3Q14202 1370 aa19.61■□□□□ 0.73
ACTR6-213ENST00000553038 MADDQ8WXG6 1647 aa19.6■□□□□ 0.73
ACTR6-213ENST00000553038 PIK3C2BO00750 1634 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms