RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 CLTCQ00610 1675 aaKnown RBP14.99□□□□□ -0.01
LETMD1-234ENST00000552645 MYT1Q01538 1121 aa14.99□□□□□ -0.01
LETMD1-234ENST00000552645 PTPRMP28827 1452 aa14.98□□□□□ -0.01
LETMD1-234ENST00000552645 ERBINQ96RT1 1412 aa14.98□□□□□ -0.01
LETMD1-234ENST00000552645 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.98□□□□□ -0.013e-14■□□□□ 10.9
LETMD1-234ENST00000552645 ROCK1Q13464 1354 aa14.97□□□□□ -0.01
LETMD1-234ENST00000552645 ANKRD50Q9ULJ7 1429 aa14.97□□□□□ -0.01
LETMD1-234ENST00000552645 RNF17Q9BXT8 1623 aaKnown RBP14.96□□□□□ -0.01
LETMD1-234ENST00000552645 CEBPAP49715 358 aaPredicted RBP14.95□□□□□ -0.02
LETMD1-234ENST00000552645 WASHC2CQ9Y4E1 1318 aa14.95□□□□□ -0.02
LETMD1-234ENST00000552645 C3P01024 1663 aa14.94□□□□□ -0.02
LETMD1-234ENST00000552645 CEP152O94986 1710 aa14.93□□□□□ -0.02
LETMD1-234ENST00000552645 CNTLNQ9NXG0 1405 aa14.93□□□□□ -0.02
LETMD1-234ENST00000552645 KDM5DQ9BY66 1539 aa14.92□□□□□ -0.02
LETMD1-234ENST00000552645 MROH1Q8NDA8 1641 aa14.92□□□□□ -0.02
LETMD1-234ENST00000552645 CFAP65Q6ZU64 1925 aaKnown RBP14.92□□□□□ -0.02
LETMD1-234ENST00000552645 MROH2AA6NES4 1674 aa14.92□□□□□ -0.02
LETMD1-234ENST00000552645 GCC2Q8IWJ2 1684 aa14.92□□□□□ -0.02
LETMD1-234ENST00000552645 DEPDC5O75140 1603 aa14.91□□□□□ -0.02
LETMD1-234ENST00000552645 PPP6R1Q9UPN7 881 aa14.91□□□□□ -0.02
LETMD1-234ENST00000552645 KANK1Q14678 1352 aa14.91□□□□□ -0.02
LETMD1-234ENST00000552645 ZMYM3Q14202 1370 aa14.9□□□□□ -0.02
LETMD1-234ENST00000552645 PRDM15P57071 1507 aaPredicted RBP14.9□□□□□ -0.02
LETMD1-234ENST00000552645 ABCC3O15438 1527 aa14.89□□□□□ -0.03
LETMD1-234ENST00000552645 NAIPQ13075 1403 aa14.89□□□□□ -0.03
LETMD1-234ENST00000552645 ZC3H13Q5T200 1668 aaKnown RBP14.89□□□□□ -0.03
LETMD1-234ENST00000552645 HFM1A2PYH4 1435 aa14.88□□□□□ -0.03
LETMD1-234ENST00000552645 CAMSAP1Q5T5Y3 1602 aa14.87□□□□□ -0.03
LETMD1-234ENST00000552645 FAM135AQ9P2D6 1515 aa14.86□□□□□ -0.03
LETMD1-234ENST00000552645 UNC13BO14795 1591 aa14.86□□□□□ -0.03
LETMD1-234ENST00000552645 TRIM52Q96A61 297 aa14.84□□□□□ -0.03
LETMD1-234ENST00000552645 NUP155O75694 1391 aa14.84□□□□□ -0.03
LETMD1-234ENST00000552645 FBXO31Q5XUX0 539 aaPredicted RBP14.84□□□□□ -0.03
LETMD1-234ENST00000552645 SETD1BQ9UPS6 1966 aaKnown RBP14.84□□□□□ -0.03
LETMD1-234ENST00000552645 VWDEQ8N2E2 1590 aa14.82□□□□□ -0.04
LETMD1-234ENST00000552645 PZPP20742 1482 aa14.82□□□□□ -0.04
LETMD1-234ENST00000552645 PREX1Q8TCU6 1659 aa14.82□□□□□ -0.04
LETMD1-234ENST00000552645 IQGAP3Q86VI3 1631 aa14.81□□□□□ -0.04
LETMD1-234ENST00000552645 TET3O43151 1660 aa14.8□□□□□ -0.04
LETMD1-234ENST00000552645 SETD5Q9C0A6 1442 aa14.8□□□□□ -0.04
LETMD1-234ENST00000552645 EFCAB6Q5THR3 1501 aa14.79□□□□□ -0.04
LETMD1-234ENST00000552645 NPATQ14207 1427 aa14.79□□□□□ -0.04
LETMD1-234ENST00000552645 PCGF6Q9BYE7 350 aa14.79□□□□□ -0.04
LETMD1-234ENST00000552645 LMTK2Q8IWU2 1503 aa14.79□□□□□ -0.04
LETMD1-234ENST00000552645 UHRF1BP1Q6BDS2 1440 aa14.78□□□□□ -0.04
LETMD1-234ENST00000552645 TNRQ92752 1358 aa14.78□□□□□ -0.04
LETMD1-234ENST00000552645 MYO3AQ8NEV4 1616 aa14.77□□□□□ -0.04
LETMD1-234ENST00000552645 TRIM26Q12899 539 aaPredicted RBP14.77□□□□□ -0.05
LETMD1-234ENST00000552645 ERVK-7P63135 1459 aa14.77□□□□□ -0.05
LETMD1-234ENST00000552645 LMTK3Q96Q04 1460 aa14.77□□□□□ -0.05
LETMD1-234ENST00000552645 E9PCH4 1651 aa14.76□□□□□ -0.05
LETMD1-234ENST00000552645 RAB3GAP2Q9H2M9 1393 aa14.76□□□□□ -0.05
LETMD1-234ENST00000552645 HSPA2P54652 639 aa14.76□□□□□ -0.05
LETMD1-234ENST00000552645 ARHGAP31Q2M1Z3 1444 aa14.76□□□□□ -0.05
LETMD1-234ENST00000552645 SLC4A1APQ9BWU0 796 aaKnown RBP14.74□□□□□ -0.05
LETMD1-234ENST00000552645 SPATA31D1Q6ZQQ2 1576 aa14.74□□□□□ -0.05
LETMD1-234ENST00000552645 CEP170BQ9Y4F5 1589 aaPredicted RBP14.72□□□□□ -0.05
LETMD1-234ENST00000552645 RPRD2Q5VT52 1461 aaKnown RBP14.72□□□□□ -0.05
LETMD1-234ENST00000552645 ZNF142P52746 1687 aaPredicted RBP14.71□□□□□ -0.05
LETMD1-234ENST00000552645 PKD2Q13563 968 aa14.7□□□□□ -0.06
LETMD1-234ENST00000552645 SYNMO15061 1565 aa14.7□□□□□ -0.06
LETMD1-234ENST00000552645 A2ML1A8K2U0 1454 aa14.69□□□□□ -0.06
LETMD1-234ENST00000552645 NLRP1Q9C000 1473 aa14.69□□□□□ -0.06
LETMD1-234ENST00000552645 SPHKAPQ2M3C7 1700 aa14.69□□□□□ -0.06
LETMD1-234ENST00000552645 FOXD1Q16676 465 aa14.69□□□□□ -0.06
LETMD1-234ENST00000552645 MPHOSPH9Q99550 1183 aa14.69□□□□□ -0.06
LETMD1-234ENST00000552645 STAG3Q9UJ98 1225 aa14.69□□□□□ -0.06
LETMD1-234ENST00000552645 PIK3C2BO00750 1634 aa14.68□□□□□ -0.06
LETMD1-234ENST00000552645 NOS1P29475 1434 aa14.67□□□□□ -0.06
LETMD1-234ENST00000552645 UGGT1Q9NYU2 1555 aa14.67□□□□□ -0.06
LETMD1-234ENST00000552645 IDI1Q13907 227 aa14.66□□□□□ -0.06
LETMD1-234ENST00000552645 ACIN1Q9UKV3 1341 aaKnown RBP14.66□□□□□ -0.06
LETMD1-234ENST00000552645 CHGAP10645 457 aaKnown RBP14.66□□□□□ -0.06
LETMD1-234ENST00000552645 UBR1Q8IWV7 1749 aa14.65□□□□□ -0.06
LETMD1-234ENST00000552645 MYO5BQ9ULV0 1848 aa14.65□□□□□ -0.06
LETMD1-234ENST00000552645 THEMISQ8N1K5 641 aaPredicted RBP14.64□□□□□ -0.07
LETMD1-234ENST00000552645 SLC52A1Q9NWF4 448 aa14.63□□□□□ -0.07
LETMD1-234ENST00000552645 STRCQ7RTU9 1775 aa14.63□□□□□ -0.07
LETMD1-234ENST00000552645 NCKAP5LQ9HCH0 1330 aa14.62□□□□□ -0.07
LETMD1-234ENST00000552645 ZEB1P37275 1124 aaPredicted RBP14.61□□□□□ -0.07
LETMD1-234ENST00000552645 CLTCL1P53675 1640 aa14.6□□□□□ -0.07
LETMD1-234ENST00000552645 ADGRB3O60242 1522 aa14.6□□□□□ -0.07
LETMD1-234ENST00000552645 TRPM2O94759 1503 aa14.6□□□□□ -0.07
LETMD1-234ENST00000552645 PTPRTO14522 1441 aa14.6□□□□□ -0.07
LETMD1-234ENST00000552645 SCAF1Q9H7N4 1312 aaKnown RBP14.6□□□□□ -0.07
LETMD1-234ENST00000552645 KIF1BO60333 1816 aa14.6□□□□□ -0.07
LETMD1-234ENST00000552645 POLR1AO95602 1720 aaPredicted RBP14.6□□□□□ -0.07
LETMD1-234ENST00000552645 KDM5AP29375 1690 aaKnown RBP14.58□□□□□ -0.07
LETMD1-234ENST00000552645 TMEM131LA2VDJ0 1609 aa14.58□□□□□ -0.07
LETMD1-234ENST00000552645 PLA2R1Q13018 1463 aa14.58□□□□□ -0.08
LETMD1-234ENST00000552645 ANKLE2Q86XL3 938 aa14.58□□□□□ -0.08
LETMD1-234ENST00000552645 SENP3Q9H4L4 574 aaPredicted RBP14.58□□□□□ -0.08
LETMD1-234ENST00000552645 ZNF326Q5BKZ1 582 aaKnown RBP14.57□□□□□ -0.08
LETMD1-234ENST00000552645 CCDC144AA2RUR9 1427 aa14.56□□□□□ -0.08
LETMD1-234ENST00000552645 TXNDC2Q86VQ3 553 aa14.55□□□□□ -0.08
LETMD1-234ENST00000552645 EID1Q9Y6B2 187 aa14.55□□□□□ -0.08
LETMD1-234ENST00000552645 TMEM2Q9UHN6 1383 aa14.55□□□□□ -0.08
LETMD1-234ENST00000552645 NUTM2DQ5VT03 806 aaPredicted RBP14.55□□□□□ -0.08
LETMD1-234ENST00000552645 PPP1R15AO75807 674 aaPredicted RBP14.54□□□□□ -0.08
LETMD1-234ENST00000552645 DMRT2Q9Y5R5 561 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms