RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 ADCY10Q96PN6 1610 aa11.28□□□□□ -0.6
CHPT1-208ENST00000552215 FAM9BQ8IZU0 186 aa11.28□□□□□ -0.6
CHPT1-208ENST00000552215 ROCK2O75116 1388 aaKnown RBP11.28□□□□□ -0.6
CHPT1-208ENST00000552215 TTC37Q6PGP7 1564 aa11.28□□□□□ -0.6
CHPT1-208ENST00000552215 PPM1GO15355 546 aaPredicted RBP11.28□□□□□ -0.6
CHPT1-208ENST00000552215 HSPA2P54652 639 aa11.27□□□□□ -0.6
CHPT1-208ENST00000552215 CC2D1BQ5T0F9 858 aaKnown RBP11.27□□□□□ -0.61
CHPT1-208ENST00000552215 CFAP65Q6ZU64 1925 aaKnown RBP11.26□□□□□ -0.61
CHPT1-208ENST00000552215 MINK1Q8N4C8 1332 aaPredicted RBP11.26□□□□□ -0.61
CHPT1-208ENST00000552215 TXNDC2Q86VQ3 553 aa11.26□□□□□ -0.61
CHPT1-208ENST00000552215 EID1Q9Y6B2 187 aa11.25□□□□□ -0.61
CHPT1-208ENST00000552215 CFAP43Q8NDM7 1665 aa11.25□□□□□ -0.61
CHPT1-208ENST00000552215 ABCC10Q5T3U5 1492 aa11.25□□□□□ -0.61
CHPT1-208ENST00000552215 SLC24A1O60721 1099 aa11.24□□□□□ -0.61
CHPT1-208ENST00000552215 ARHGEF12Q9NZN5 1544 aa11.24□□□□□ -0.61
CHPT1-208ENST00000552215 DHX29Q7Z478 1369 aaKnown RBP11.24□□□□□ -0.61
CHPT1-208ENST00000552215 CLSPNQ9HAW4 1339 aa11.22□□□□□ -0.61
CHPT1-208ENST00000552215 UHRF1BP1LA0JNW5 1464 aa11.21□□□□□ -0.61
CHPT1-208ENST00000552215 ROCK1Q13464 1354 aa11.2□□□□□ -0.62
CHPT1-208ENST00000552215 LRRIQ1Q96JM4 1722 aa11.2□□□□□ -0.62
CHPT1-208ENST00000552215 VGFO15240 615 aaPredicted RBP11.2□□□□□ -0.62
CHPT1-208ENST00000552215 ZNF518AQ6AHZ1 1483 aa11.19□□□□□ -0.62
CHPT1-208ENST00000552215 KIAA1107Q9UPP5 1409 aa11.19□□□□□ -0.62
CHPT1-208ENST00000552215 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.19□□□□□ -0.62
CHPT1-208ENST00000552215 ADGRF5Q8IZF2 1346 aa11.19□□□□□ -0.62
CHPT1-208ENST00000552215 A2MP01023 1474 aa11.19□□□□□ -0.62
CHPT1-208ENST00000552215 MBD5Q9P267 1494 aa11.19□□□□□ -0.62
CHPT1-208ENST00000552215 PAK3O75914 559 aaPredicted RBP11.19□□□□□ -0.62
CHPT1-208ENST00000552215 HDGFP51858 240 aaKnown RBP11.18□□□□□ -0.62
CHPT1-208ENST00000552215 WAPLQ7Z5K2 1190 aa11.17□□□□□ -0.62
CHPT1-208ENST00000552215 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.17□□□□□ -0.62
CHPT1-208ENST00000552215 MRS2Q9HD23 443 aa11.17□□□□□ -0.62
CHPT1-208ENST00000552215 ANKRD30BQ9BXX2 1392 aa11.17□□□□□ -0.62
CHPT1-208ENST00000552215 KDM6BO15054 1643 aa11.17□□□□□ -0.62
CHPT1-208ENST00000552215 SAMD9LQ8IVG5 1584 aa11.16□□□□□ -0.62
CHPT1-208ENST00000552215 TEX14Q8IWB6 1497 aa11.16□□□□□ -0.62
CHPT1-208ENST00000552215 SHROOM2Q13796 1616 aa11.16□□□□□ -0.62
CHPT1-208ENST00000552215 TMF1P82094 1093 aa11.16□□□□□ -0.62
CHPT1-208ENST00000552215 CABP2Q9NPB3 220 aa11.16□□□□□ -0.62
CHPT1-208ENST00000552215 ERBINQ96RT1 1412 aa11.15□□□□□ -0.62
CHPT1-208ENST00000552215 CENPBP07199 599 aaPredicted RBP11.15□□□□□ -0.62
CHPT1-208ENST00000552215 NUTM2GQ5VZR2 741 aa11.15□□□□□ -0.63
CHPT1-208ENST00000552215 TCOF1Q13428 1488 aaKnown RBP11.15□□□□□ -0.63
CHPT1-208ENST00000552215 A0A0G2JS52 829 aa11.14□□□□□ -0.63
CHPT1-208ENST00000552215 KNSTRNQ9Y448 316 aa11.14□□□□□ -0.63
CHPT1-208ENST00000552215 POGZQ7Z3K3 1410 aa11.14□□□□□ -0.63
CHPT1-208ENST00000552215 PRAM1Q96QH2 718 aa11.13□□□□□ -0.63
CHPT1-208ENST00000552215 ACIN1Q9UKV3 1341 aaKnown RBP11.13□□□□□ -0.63
CHPT1-208ENST00000552215 USP47Q96K76 1375 aa11.13□□□□□ -0.63
CHPT1-208ENST00000552215 ITSN2Q9NZM3 1697 aa11.13□□□□□ -0.63
CHPT1-208ENST00000552215 NEUROD2Q15784 382 aa11.13□□□□□ -0.63
CHPT1-208ENST00000552215 COL17A1Q9UMD9 1497 aaPredicted RBP11.12□□□□□ -0.63
CHPT1-208ENST00000552215 HAP1P54257 671 aaPredicted RBP11.12□□□□□ -0.63
CHPT1-208ENST00000552215 TIMELESSQ9UNS1 1208 aa11.12□□□□□ -0.63
CHPT1-208ENST00000552215 ZMYM3Q14202 1370 aa11.12□□□□□ -0.63
CHPT1-208ENST00000552215 C11orf95C9JLR9 678 aaPredicted RBP11.12□□□□□ -0.63
CHPT1-208ENST00000552215 HNRNPUQ00839 825 aaKnown RBP eCLIP11.12□□□□□ -0.63
CHPT1-208ENST00000552215 XPCQ01831 940 aaPredicted RBP11.12□□□□□ -0.63
CHPT1-208ENST00000552215 SLC52A1Q9NWF4 448 aa11.12□□□□□ -0.63
CHPT1-208ENST00000552215 THEMISQ8N1K5 641 aaPredicted RBP11.11□□□□□ -0.63
CHPT1-208ENST00000552215 PMFBP1Q8TBY8 1022 aa11.11□□□□□ -0.63
CHPT1-208ENST00000552215 BCL11AQ9H165 835 aa11.11□□□□□ -0.63
CHPT1-208ENST00000552215 ATP7AQ04656 1500 aa11.11□□□□□ -0.63
CHPT1-208ENST00000552215 MYO5CQ9NQX4 1742 aa11.1□□□□□ -0.63
CHPT1-208ENST00000552215 PANK3Q9H999 370 aa11.1□□□□□ -0.63
CHPT1-208ENST00000552215 CDC42BPAQ5VT25 1732 aa11.1□□□□□ -0.63
CHPT1-208ENST00000552215 NGDNQ8NEJ9 315 aaKnown RBP11.09□□□□□ -0.63
CHPT1-208ENST00000552215 DNMT1P26358 1616 aaKnown RBP11.09□□□□□ -0.63
CHPT1-208ENST00000552215 NCKAP5LQ9HCH0 1330 aa11.09□□□□□ -0.63
CHPT1-208ENST00000552215 ANKLE2Q86XL3 938 aa11.08□□□□□ -0.64
CHPT1-208ENST00000552215 SLC12A5Q9H2X9 1139 aa11.08□□□□□ -0.64
CHPT1-208ENST00000552215 PROSER2Q86WR7 435 aaPredicted RBP11.07□□□□□ -0.64
CHPT1-208ENST00000552215 MAPKBP1O60336 1514 aa11.07□□□□□ -0.64
CHPT1-208ENST00000552215 NOS1P29475 1434 aa11.07□□□□□ -0.64
CHPT1-208ENST00000552215 FAM135AQ9P2D6 1515 aa11.07□□□□□ -0.64
CHPT1-208ENST00000552215 ATP10AO60312 1499 aa11.07□□□□□ -0.64
CHPT1-208ENST00000552215 PZPP20742 1482 aa11.07□□□□□ -0.64
CHPT1-208ENST00000552215 DUOX2Q9NRD8 1548 aa11.07□□□□□ -0.64
CHPT1-208ENST00000552215 LTV1Q96GA3 475 aaPredicted RBP11.06□□□□□ -0.64
CHPT1-208ENST00000552215 NEO1Q92859 1461 aa11.06□□□□□ -0.64
CHPT1-208ENST00000552215 CDC42BPBQ9Y5S2 1711 aa11.06□□□□□ -0.64
CHPT1-208ENST00000552215 U2SURPO15042 1029 aaKnown RBP11.05□□□□□ -0.64
CHPT1-208ENST00000552215 WASHC2AQ641Q2 1341 aa11.05□□□□□ -0.64
CHPT1-208ENST00000552215 ABCC1P33527 1531 aa11.05□□□□□ -0.64
CHPT1-208ENST00000552215 KIF7Q2M1P5 1343 aa11.05□□□□□ -0.64
CHPT1-208ENST00000552215 CENPJQ9HC77 1338 aaPredicted RBP11.05□□□□□ -0.64
CHPT1-208ENST00000552215 UGGT1Q9NYU2 1555 aa11.05□□□□□ -0.64
CHPT1-208ENST00000552215 TNRQ92752 1358 aa11.05□□□□□ -0.64
CHPT1-208ENST00000552215 PIP4K2BP78356 416 aa11.04□□□□□ -0.64
CHPT1-208ENST00000552215 PREX2Q70Z35 1606 aa11.04□□□□□ -0.64
CHPT1-208ENST00000552215 LTKP29376 864 aa11.04□□□□□ -0.64
CHPT1-208ENST00000552215 CDCA8Q53HL2 280 aa11.04□□□□□ -0.64
CHPT1-208ENST00000552215 MORC1Q86VD1 984 aa11.03□□□□□ -0.64
CHPT1-208ENST00000552215 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.03□□□□□ -0.64
CHPT1-208ENST00000552215 AMOTL2Q9Y2J4 779 aa11.03□□□□□ -0.64
CHPT1-208ENST00000552215 FBLN1P23142 703 aa11.03□□□□□ -0.64
CHPT1-208ENST00000552215 GGNBP2Q9H3C7 697 aa11.03□□□□□ -0.64
CHPT1-208ENST00000552215 RTEL1-TNFRSF6BF6WH68 1400 aa11.02□□□□□ -0.64
CHPT1-208ENST00000552215 IRX6P78412 446 aaPredicted RBP11.02□□□□□ -0.65
CHPT1-208ENST00000552215 WDR43Q15061 677 aaKnown RBP eCLIP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms