RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 L3MBTL3Q96JM7 780 aaPredicted RBP7.64□□□□□ -1.19
LSM6P2-201ENST00000552208 G3V3G9 751 aa7.63□□□□□ -1.19
LSM6P2-201ENST00000552208 FLIIQ13045 1269 aa7.63□□□□□ -1.19
LSM6P2-201ENST00000552208 PTGDRQ13258 359 aa7.63□□□□□ -1.19
LSM6P2-201ENST00000552208 DDX12PQ92771 950 aa7.62□□□□□ -1.19
LSM6P2-201ENST00000552208 UPF1Q92900 1129 aaKnown RBP eCLIP7.62□□□□□ -1.19
LSM6P2-201ENST00000552208 TMUB1Q9BVT8 246 aa7.61□□□□□ -1.19
LSM6P2-201ENST00000552208 MS4A1P11836 297 aa7.6□□□□□ -1.19
LSM6P2-201ENST00000552208 REPIN1Q9BWE0 567 aaKnown RBP7.6□□□□□ -1.19
LSM6P2-201ENST00000552208 EVI5O60447 810 aa7.59□□□□□ -1.19
LSM6P2-201ENST00000552208 ANO8Q9HCE9 1232 aaPredicted RBP7.59□□□□□ -1.19
LSM6P2-201ENST00000552208 TBC1D12O60347 775 aa7.58□□□□□ -1.2
LSM6P2-201ENST00000552208 TTLL12Q14166 644 aaPredicted RBP7.58□□□□□ -1.2
LSM6P2-201ENST00000552208 GIGYF2Q6Y7W6 1299 aaKnown RBP7.58□□□□□ -1.2
LSM6P2-201ENST00000552208 NPDC1Q9NQX5 325 aaPredicted RBP7.58□□□□□ -1.2
LSM6P2-201ENST00000552208 A6NJR5 290 aa7.57□□□□□ -1.2
LSM6P2-201ENST00000552208 PTCD2Q8WV60 388 aaKnown RBP7.57□□□□□ -1.2
LSM6P2-201ENST00000552208 MARVELD3Q96A59 401 aa7.57□□□□□ -1.2
LSM6P2-201ENST00000552208 PODXL2Q9NZ53 605 aa7.56□□□□□ -1.2
LSM6P2-201ENST00000552208 KRTAP3-3Q9BYR6 98 aa7.55□□□□□ -1.2
LSM6P2-201ENST00000552208 KRTAP3-2Q9BYR7 98 aa7.55□□□□□ -1.2
LSM6P2-201ENST00000552208 ARID3CA6NKF2 412 aa7.54□□□□□ -1.2
LSM6P2-201ENST00000552208 APBB1O00213 710 aa7.54□□□□□ -1.2
LSM6P2-201ENST00000552208 SNPHO15079 494 aa7.54□□□□□ -1.2
LSM6P2-201ENST00000552208 TRIM26Q12899 539 aaPredicted RBP7.54□□□□□ -1.2
LSM6P2-201ENST00000552208 SH3D19Q5HYK7 790 aa7.54□□□□□ -1.2
LSM6P2-201ENST00000552208 SLC34A2O95436 690 aa7.53□□□□□ -1.2
LSM6P2-201ENST00000552208 HRCP23327 699 aa7.53□□□□□ -1.2
LSM6P2-201ENST00000552208 PCMTD1Q96MG8 357 aaPredicted RBP7.53□□□□□ -1.2
LSM6P2-201ENST00000552208 PHOX2BQ99453 314 aa7.53□□□□□ -1.2
LSM6P2-201ENST00000552208 TRAK2O60296 914 aa7.52□□□□□ -1.21
LSM6P2-201ENST00000552208 EN1Q05925 392 aaPredicted RBP7.52□□□□□ -1.21
LSM6P2-201ENST00000552208 ARID3AQ99856 593 aa7.52□□□□□ -1.21
LSM6P2-201ENST00000552208 CDHR5Q9HBB8 845 aa7.52□□□□□ -1.21
LSM6P2-201ENST00000552208 PHF14O94880 888 aa7.51□□□□□ -1.21
LSM6P2-201ENST00000552208 CLCN1P35523 988 aa7.51□□□□□ -1.21
LSM6P2-201ENST00000552208 MCM6Q14566 821 aa7.51□□□□□ -1.21
LSM6P2-201ENST00000552208 CLUAP1Q96AJ1 413 aa7.51□□□□□ -1.21
LSM6P2-201ENST00000552208 SKIV2LQ15477 1246 aaKnown RBP7.5□□□□□ -1.21
LSM6P2-201ENST00000552208 EPAS1Q99814 870 aa7.5□□□□□ -1.21
LSM6P2-201ENST00000552208 GPCPD1Q9NPB8 672 aa7.5□□□□□ -1.21
LSM6P2-201ENST00000552208 SSTR3P32745 418 aaPredicted RBP7.48□□□□□ -1.21
LSM6P2-201ENST00000552208 MDM2Q00987 491 aaPredicted RBP7.48□□□□□ -1.21
LSM6P2-201ENST00000552208 C3orf67Q6ZVT6 689 aa7.48□□□□□ -1.21
LSM6P2-201ENST00000552208 PCDHGA10Q9Y5H3 936 aa7.48□□□□□ -1.21
LSM6P2-201ENST00000552208 KDM4FA0A1W2PPD8 638 aa7.46□□□□□ -1.22
LSM6P2-201ENST00000552208 FNBP4Q8N3X1 1017 aaPredicted RBP7.46□□□□□ -1.22
LSM6P2-201ENST00000552208 PROCA1Q8NCQ7 364 aaPredicted RBP7.46□□□□□ -1.22
LSM6P2-201ENST00000552208 FAM217BQ9NTX9 383 aaPredicted RBP7.46□□□□□ -1.22
LSM6P2-201ENST00000552208 MAP3K7O43318 606 aa7.45□□□□□ -1.22
LSM6P2-201ENST00000552208 EMP3P54852 163 aa7.45□□□□□ -1.22
LSM6P2-201ENST00000552208 TSR1Q2NL82 804 aaKnown RBP7.45□□□□□ -1.22
LSM6P2-201ENST00000552208 CCDC82Q8N4S0 544 aa7.45□□□□□ -1.22
LSM6P2-201ENST00000552208 BEGAINQ9BUH8 593 aa7.45□□□□□ -1.22
LSM6P2-201ENST00000552208 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.45□□□□□ -1.22
LSM6P2-201ENST00000552208 TYW1BQ6NUM6 668 aa7.44□□□□□ -1.22
LSM6P2-201ENST00000552208 METTL3Q86U44 580 aaKnown RBP7.44□□□□□ -1.22
LSM6P2-201ENST00000552208 HS3ST6Q96QI5 342 aa7.44□□□□□ -1.22
LSM6P2-201ENST00000552208 POTEB3A0JP26 581 aa7.43□□□□□ -1.22
LSM6P2-201ENST00000552208 POTEBQ6S5H4 581 aa7.43□□□□□ -1.22
LSM6P2-201ENST00000552208 TTC13Q8NBP0 860 aa7.43□□□□□ -1.22
LSM6P2-201ENST00000552208 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.43□□□□□ -1.22
LSM6P2-201ENST00000552208 OATP04181 439 aa7.42□□□□□ -1.22
LSM6P2-201ENST00000552208 FAM161AQ3B820 660 aa7.42□□□□□ -1.22
LSM6P2-201ENST00000552208 PROSER2Q86WR7 435 aaPredicted RBP7.42□□□□□ -1.22
LSM6P2-201ENST00000552208 PXYLP1Q8TE99 480 aa7.42□□□□□ -1.22
LSM6P2-201ENST00000552208 FBXW7Q969H0 707 aa7.42□□□□□ -1.22
LSM6P2-201ENST00000552208 RBM33Q96EV2 1170 aaKnown RBP7.42□□□□□ -1.22
LSM6P2-201ENST00000552208 MYSM1Q5VVJ2 828 aa7.41□□□□□ -1.22
LSM6P2-201ENST00000552208 POM121Q96HA1 1249 aa7.41□□□□□ -1.22
LSM6P2-201ENST00000552208 ADGRG1Q9Y653 693 aa7.41□□□□□ -1.22
LSM6P2-201ENST00000552208 CERKQ8TCT0 537 aa7.4□□□□□ -1.22
LSM6P2-201ENST00000552208 RNF166Q96A37 237 aaPredicted RBP7.4□□□□□ -1.22
LSM6P2-201ENST00000552208 JPH4Q96JJ6 628 aa7.4□□□□□ -1.22
LSM6P2-201ENST00000552208 POLR3EQ9NVU0 708 aa7.4□□□□□ -1.22
LSM6P2-201ENST00000552208 PCDHGA4Q9Y5G9 962 aa7.4□□□□□ -1.22
LSM6P2-201ENST00000552208 FAM205CA6NFA0 338 aa7.39□□□□□ -1.23
LSM6P2-201ENST00000552208 SPDYE5A6NIY4 337 aa7.39□□□□□ -1.23
LSM6P2-201ENST00000552208 FOSBP53539 338 aa7.39□□□□□ -1.23
LSM6P2-201ENST00000552208 NLRP7Q8WX94 980 aa7.39□□□□□ -1.23
LSM6P2-201ENST00000552208 ZNF777Q9ULD5 760 aaPredicted RBP7.39□□□□□ -1.23
LSM6P2-201ENST00000552208 PDIA4P13667 645 aaKnown RBP7.38□□□□□ -1.23
LSM6P2-201ENST00000552208 FBXO31Q5XUX0 539 aaPredicted RBP7.38□□□□□ -1.23
LSM6P2-201ENST00000552208 PADI6Q6TGC4 694 aa7.38□□□□□ -1.23
LSM6P2-201ENST00000552208 BANK1Q8NDB2 785 aa7.38□□□□□ -1.23
LSM6P2-201ENST00000552208 RBM27Q9P2N5 1060 aaKnown RBP7.38□□□□□ -1.23
LSM6P2-201ENST00000552208 C6orf132Q5T0Z8 1188 aa7.37□□□□□ -1.23
LSM6P2-201ENST00000552208 COG6Q9Y2V7 657 aa7.37□□□□□ -1.23
LSM6P2-201ENST00000552208 CLK2P49760 499 aaKnown RBP7.36□□□□□ -1.23
LSM6P2-201ENST00000552208 PPP2R2DQ66LE6 453 aa7.36□□□□□ -1.23
LSM6P2-201ENST00000552208 NECTIN2Q92692 538 aa7.36□□□□□ -1.23
LSM6P2-201ENST00000552208 TBC1D2Q9BYX2 928 aa7.36□□□□□ -1.23
LSM6P2-201ENST00000552208 RAD21O60216 631 aa7.35□□□□□ -1.23
LSM6P2-201ENST00000552208 RFC5P40937 340 aa7.35□□□□□ -1.23
LSM6P2-201ENST00000552208 SNRKQ9NRH2 765 aa7.35□□□□□ -1.23
LSM6P2-201ENST00000552208 SERPINA10Q9UK55 444 aa7.34□□□□□ -1.23
LSM6P2-201ENST00000552208 DIXDC1Q155Q3 683 aa7.33□□□□□ -1.24
LSM6P2-201ENST00000552208 TUSC1Q2TAM9 212 aa7.33□□□□□ -1.24
LSM6P2-201ENST00000552208 ZDHHC16Q969W1 377 aa7.33□□□□□ -1.24
LSM6P2-201ENST00000552208 LIMD1Q9UGP4 676 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms