RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 ADGBQ8N7X0 1667 aa23.03■■□□□ 1.28
SNRPF-203ENST00000551316 ARHGAP35Q9NRY4 1499 aa23.01■■□□□ 1.27
SNRPF-203ENST00000551316 GGT6Q6P531 493 aa22.99■■□□□ 1.27
SNRPF-203ENST00000551316 TNRQ92752 1358 aa22.99■■□□□ 1.27
SNRPF-203ENST00000551316 FMN1Q68DA7 1419 aa22.99■■□□□ 1.27
SNRPF-203ENST00000551316 FBXO31Q5XUX0 539 aaPredicted RBP22.98■■□□□ 1.27
SNRPF-203ENST00000551316 SPAG9O60271 1321 aaKnown RBP22.96■■□□□ 1.27
SNRPF-203ENST00000551316 UGGT1Q9NYU2 1555 aa22.96■■□□□ 1.27
SNRPF-203ENST00000551316 CDK11AQ9UQ88 783 aaPredicted RBP22.95■■□□□ 1.26
SNRPF-203ENST00000551316 ROBO1Q9Y6N7 1651 aa22.95■■□□□ 1.26
SNRPF-203ENST00000551316 PZPP20742 1482 aa22.94■■□□□ 1.26
SNRPF-203ENST00000551316 HNRNPMP52272 730 aaKnown RBP eCLIP22.9■■□□□ 1.26
SNRPF-203ENST00000551316 UPF1Q92900 1129 aaKnown RBP eCLIP22.9■■□□□ 1.26
SNRPF-203ENST00000551316 ANKLE2Q86XL3 938 aa22.89■■□□□ 1.25
SNRPF-203ENST00000551316 KDM5DQ9BY66 1539 aa22.88■■□□□ 1.25
SNRPF-203ENST00000551316 ZNF777Q9ULD5 760 aaPredicted RBP22.88■■□□□ 1.25
SNRPF-203ENST00000551316 GPATCH8Q9UKJ3 1502 aaKnown RBP22.87■■□□□ 1.25
SNRPF-203ENST00000551316 FAM135AQ9P2D6 1515 aa22.85■■□□□ 1.25
SNRPF-203ENST00000551316 NLRP1Q9C000 1473 aa22.85■■□□□ 1.25
SNRPF-203ENST00000551316 UBR1Q8IWV7 1749 aa22.82■■□□□ 1.24
SNRPF-203ENST00000551316 FAM135BQ49AJ0 1406 aa22.82■■□□□ 1.24
SNRPF-203ENST00000551316 PHLPP1O60346 1717 aa22.81■■□□□ 1.24
SNRPF-203ENST00000551316 LRP6O75581 1613 aa22.81■■□□□ 1.24
SNRPF-203ENST00000551316 MAP3K1Q13233 1512 aa22.8■■□□□ 1.24
SNRPF-203ENST00000551316 MIA2Q96PC5 1412 aa22.8■■□□□ 1.24
SNRPF-203ENST00000551316 EEA1Q15075 1411 aa22.78■■□□□ 1.24
SNRPF-203ENST00000551316 KIAA1107Q9UPP5 1409 aa22.78■■□□□ 1.24
SNRPF-203ENST00000551316 CCDC18Q5T9S5 1454 aa22.78■■□□□ 1.24
SNRPF-203ENST00000551316 THEMISQ8N1K5 641 aaPredicted RBP22.75■■□□□ 1.23
SNRPF-203ENST00000551316 EHMT2Q96KQ7 1210 aa22.74■■□□□ 1.23
SNRPF-203ENST00000551316 COL16A1Q07092 1604 aaPredicted RBP22.74■■□□□ 1.23
SNRPF-203ENST00000551316 TRIM52Q96A61 297 aa22.72■■□□□ 1.23
SNRPF-203ENST00000551316 PLEKHH2Q8IVE3 1493 aa22.72■■□□□ 1.23
SNRPF-203ENST00000551316 CASKIN1Q8WXD9 1431 aa22.7■■□□□ 1.22
SNRPF-203ENST00000551316 NCOA2Q15596 1464 aa22.7■■□□□ 1.22
SNRPF-203ENST00000551316 SCAF11Q99590 1463 aaKnown RBP22.7■■□□□ 1.22
SNRPF-203ENST00000551316 MBD5Q9P267 1494 aa22.69■■□□□ 1.22
SNRPF-203ENST00000551316 DHX29Q7Z478 1369 aaKnown RBP22.68■■□□□ 1.22
SNRPF-203ENST00000551316 CFAP65Q6ZU64 1925 aaKnown RBP22.68■■□□□ 1.22
SNRPF-203ENST00000551316 TIAM1Q13009 1591 aa22.66■■□□□ 1.22
SNRPF-203ENST00000551316 ERVK-7P63135 1459 aa22.66■■□□□ 1.22
SNRPF-203ENST00000551316 CEP152O94986 1710 aa22.65■■□□□ 1.22
SNRPF-203ENST00000551316 TMEM94Q12767 1356 aa22.65■■□□□ 1.22
SNRPF-203ENST00000551316 ZNF644Q9H582 1327 aaPredicted RBP22.65■■□□□ 1.22
SNRPF-203ENST00000551316 ARHGAP23Q9P227 1491 aa22.65■■□□□ 1.22
SNRPF-203ENST00000551316 ABCC3O15438 1527 aa22.64■■□□□ 1.21
SNRPF-203ENST00000551316 SLIT1O75093 1534 aa22.63■■□□□ 1.21
SNRPF-203ENST00000551316 KIF3BO15066 747 aa22.63■■□□□ 1.21
SNRPF-203ENST00000551316 RBM33Q96EV2 1170 aaKnown RBP22.63■■□□□ 1.21
SNRPF-203ENST00000551316 LTKP29376 864 aa22.62■■□□□ 1.21
SNRPF-203ENST00000551316 JCADQ9P266 1359 aa22.61■■□□□ 1.21
SNRPF-203ENST00000551316 MROH1Q8NDA8 1641 aa22.6■■□□□ 1.21
SNRPF-203ENST00000551316 LRRC9Q6ZRR7 1453 aa22.6■■□□□ 1.21
SNRPF-203ENST00000551316 RTEL1-TNFRSF6BF6WH68 1400 aa22.6■■□□□ 1.21
SNRPF-203ENST00000551316 SHPRHQ149N8 1683 aa22.6■■□□□ 1.21
SNRPF-203ENST00000551316 WASHC2CQ9Y4E1 1318 aa22.59■■□□□ 1.21
SNRPF-203ENST00000551316 SETBP1Q9Y6X0 1596 aa22.59■■□□□ 1.21
SNRPF-203ENST00000551316 CFDP1Q9UEE9 299 aaPredicted RBP22.58■■□□□ 1.21
SNRPF-203ENST00000551316 FYCO1Q9BQS8 1478 aa22.58■■□□□ 1.2
SNRPF-203ENST00000551316 NWD1Q149M9 1564 aa22.57■■□□□ 1.2
SNRPF-203ENST00000551316 PIK3C2BO00750 1634 aa22.55■■□□□ 1.2
SNRPF-203ENST00000551316 CDK12Q9NYV4 1490 aaPredicted RBP22.54■■□□□ 1.2
SNRPF-203ENST00000551316 CCNB3Q8WWL7 1395 aa22.54■■□□□ 1.2
SNRPF-203ENST00000551316 RGS12O14924 1447 aa22.54■■□□□ 1.2
SNRPF-203ENST00000551316 PRDM15P57071 1507 aaPredicted RBP22.53■■□□□ 1.2
SNRPF-203ENST00000551316 UBTFP17480 764 aaKnown RBP22.53■■□□□ 1.2
SNRPF-203ENST00000551316 KDM5AP29375 1690 aaKnown RBP22.52■■□□□ 1.2
SNRPF-203ENST00000551316 DIP2AQ14689 1571 aa22.5■■□□□ 1.19
SNRPF-203ENST00000551316 TET3O43151 1660 aa22.49■■□□□ 1.19
SNRPF-203ENST00000551316 EP400Q96L91 3159 aa22.48■■□□□ 1.19
SNRPF-203ENST00000551316 CCDC141Q6ZP82 1450 aa22.48■■□□□ 1.19
SNRPF-203ENST00000551316 CAMSAP2Q08AD1 1489 aa22.47■■□□□ 1.19
SNRPF-203ENST00000551316 AHDC1Q5TGY3 1603 aaPredicted RBP22.46■■□□□ 1.19
SNRPF-203ENST00000551316 ZNF772Q68DY9 489 aaPredicted RBP22.46■■□□□ 1.19
SNRPF-203ENST00000551316 TXNDC2Q86VQ3 553 aa22.46■■□□□ 1.19
SNRPF-203ENST00000551316 NKTRP30414 1462 aaKnown RBP22.46■■□□□ 1.19
SNRPF-203ENST00000551316 FGD6Q6ZV73 1430 aa22.44■■□□□ 1.18
SNRPF-203ENST00000551316 RXRBP28702 533 aa22.43■■□□□ 1.18
SNRPF-203ENST00000551316 MEX3CQ5U5Q3 659 aaKnown RBP22.43■■□□□ 1.18
SNRPF-203ENST00000551316 EIF2AK4Q9P2K8 1649 aaKnown RBP22.42■■□□□ 1.18
SNRPF-203ENST00000551316 MAST1Q9Y2H9 1570 aa22.42■■□□□ 1.18
SNRPF-203ENST00000551316 SPATA31A6Q5VVP1 1343 aa22.41■■□□□ 1.18
SNRPF-203ENST00000551316 PROSER2Q86WR7 435 aaPredicted RBP22.39■■□□□ 1.17
SNRPF-203ENST00000551316 CHD2O14647 1828 aaKnown RBP22.38■■□□□ 1.17
SNRPF-203ENST00000551316 KCNA6P17658 529 aa22.38■■□□□ 1.17
SNRPF-203ENST00000551316 SLAIN2Q9P270 581 aa22.38■■□□□ 1.17
SNRPF-203ENST00000551316 MSH6P52701 1360 aa22.38■■□□□ 1.17
SNRPF-203ENST00000551316 TMEM2Q9UHN6 1383 aa22.38■■□□□ 1.17
SNRPF-203ENST00000551316 SLC26A8Q96RN1 970 aa22.36■■□□□ 1.17
SNRPF-203ENST00000551316 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.35■■□□□ 1.17
SNRPF-203ENST00000551316 ARHGEF5Q12774 1597 aa22.35■■□□□ 1.17
SNRPF-203ENST00000551316 EHBP1L1Q8N3D4 1523 aa22.35■■□□□ 1.17
SNRPF-203ENST00000551316 AFF2P51816 1311 aa22.34■■□□□ 1.17
SNRPF-203ENST00000551316 EFCAB6Q5THR3 1501 aa22.33■■□□□ 1.17
SNRPF-203ENST00000551316 MTUS2Q5JR59 1369 aa22.32■■□□□ 1.16
SNRPF-203ENST00000551316 MYO5BQ9ULV0 1848 aa22.3■■□□□ 1.16
SNRPF-203ENST00000551316 NUTM2BA6NNL0 878 aaPredicted RBP22.28■■□□□ 1.16
SNRPF-203ENST00000551316 NUTM2EB1AL46 878 aaPredicted RBP22.28■■□□□ 1.16
SNRPF-203ENST00000551316 NUTM2AQ8IVF1 878 aaPredicted RBP22.28■■□□□ 1.16
SNRPF-203ENST00000551316 EID1Q9Y6B2 187 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms