RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	CPS1	P31327	1500 aa		10.39	□□□□□ -0.75
RACGAP1-223	ENST00000551260	AGL	P35573	1532 aa		10.39	□□□□□ -0.75
RACGAP1-223	ENST00000551260	POTEH	Q6S545	545 aa		10.39	□□□□□ -0.75
RACGAP1-223	ENST00000551260	FAM9A	Q8IZU1	332 aa	Predicted RBP	10.39	□□□□□ -0.75
RACGAP1-223	ENST00000551260	ESF1	Q9H501	851 aa	Known RBP	10.39	□□□□□ -0.75
RACGAP1-223	ENST00000551260	PLCH2	O75038	1416 aa		10.39	□□□□□ -0.75
RACGAP1-223	ENST00000551260	PKD2	Q13563	968 aa		10.38	□□□□□ -0.75
RACGAP1-223	ENST00000551260	MYT1L	Q9UL68	1186 aa		10.38	□□□□□ -0.75
RACGAP1-223	ENST00000551260	NEURL4	Q96JN8	1562 aa		10.38	□□□□□ -0.75
RACGAP1-223	ENST00000551260	KIDINS220	Q9ULH0	1771 aa		10.37	□□□□□ -0.75
RACGAP1-223	ENST00000551260	FXR2	P51116	673 aa	Known RBP eCLIP	10.37	□□□□□ -0.75
RACGAP1-223	ENST00000551260	AFAP1	Q8N556	730 aa		10.37	□□□□□ -0.75
RACGAP1-223	ENST00000551260	CDC42BPB	Q9Y5S2	1711 aa		10.37	□□□□□ -0.75
RACGAP1-223	ENST00000551260	CDK13	Q14004	1512 aa	Known RBP	10.37	□□□□□ -0.75
RACGAP1-223	ENST00000551260	ZNF518A	Q6AHZ1	1483 aa		10.36	□□□□□ -0.75
RACGAP1-223	ENST00000551260	SHANK2	Q9UPX8	1470 aa		10.36	□□□□□ -0.75
RACGAP1-223	ENST00000551260	NPAT	Q14207	1427 aa		10.36	□□□□□ -0.75
RACGAP1-223	ENST00000551260	PIP4P2	Q8N4L2	257 aa		10.36	□□□□□ -0.75
RACGAP1-223	ENST00000551260	DNMT1	P26358	1616 aa	Known RBP	10.36	□□□□□ -0.75
RACGAP1-223	ENST00000551260	KIF14	Q15058	1648 aa		10.36	□□□□□ -0.75
RACGAP1-223	ENST00000551260	VWDE	Q8N2E2	1590 aa		10.35	□□□□□ -0.75
RACGAP1-223	ENST00000551260	XIRP1	Q702N8	1843 aa	Known RBP	10.35	□□□□□ -0.75
RACGAP1-223	ENST00000551260	ITSN2	Q9NZM3	1697 aa		10.34	□□□□□ -0.75
RACGAP1-223	ENST00000551260	PTPRK	Q15262	1439 aa		10.34	□□□□□ -0.75
RACGAP1-223	ENST00000551260	CNTLN	Q9NXG0	1405 aa		10.34	□□□□□ -0.75
RACGAP1-223	ENST00000551260	ZMYM3	Q14202	1370 aa		10.33	□□□□□ -0.76
RACGAP1-223	ENST00000551260	PRX	Q9BXM0	1461 aa		10.33	□□□□□ -0.76
RACGAP1-223	ENST00000551260	RNF17	Q9BXT8	1623 aa	Known RBP	10.33	□□□□□ -0.76
RACGAP1-223	ENST00000551260	RANGAP1	P46060	587 aa	Predicted RBP	10.32	□□□□□ -0.76
RACGAP1-223	ENST00000551260	ARHGAP5	Q13017	1502 aa		10.32	□□□□□ -0.76
RACGAP1-223	ENST00000551260	EFCAB2	Q5VUJ9	269 aa		10.31	□□□□□ -0.76
RACGAP1-223	ENST00000551260	MLH3	Q9UHC1	1453 aa		10.3	□□□□□ -0.76
RACGAP1-223	ENST00000551260	PRR29	P0C7W0	189 aa		10.3	□□□□□ -0.76
RACGAP1-223	ENST00000551260	STAG3	Q9UJ98	1225 aa		10.3	□□□□□ -0.76
RACGAP1-223	ENST00000551260	SRCAP	Q6ZRS2	3230 aa		10.29	□□□□□ -0.76
RACGAP1-223	ENST00000551260	LRRIQ1	Q96JM4	1722 aa		10.28	□□□□□ -0.76
RACGAP1-223	ENST00000551260	UPF1	Q92900	1129 aa	Known RBP eCLIP	10.28	□□□□□ -0.76
RACGAP1-223	ENST00000551260	A2ML1	A8K2U0	1454 aa		10.27	□□□□□ -0.77
RACGAP1-223	ENST00000551260	IQGAP1	P46940	1657 aa		10.27	□□□□□ -0.77
RACGAP1-223	ENST00000551260	LRRC7	Q96NW7	1537 aa		10.27	□□□□□ -0.77
RACGAP1-223	ENST00000551260	ABCC1	P33527	1531 aa		10.26	□□□□□ -0.77
RACGAP1-223	ENST00000551260	SYNM	O15061	1565 aa		10.26	□□□□□ -0.77
RACGAP1-223	ENST00000551260	PREX2	Q70Z35	1606 aa		10.25	□□□□□ -0.77
RACGAP1-223	ENST00000551260	PRKAR2A	P13861	404 aa	Known RBP	10.24	□□□□□ -0.77
RACGAP1-223	ENST00000551260	CDC42BPA	Q5VT25	1732 aa		10.24	□□□□□ -0.77
RACGAP1-223	ENST00000551260	DEPDC5	O75140	1603 aa		10.22	□□□□□ -0.77
RACGAP1-223	ENST00000551260	ROBO1	Q9Y6N7	1651 aa		10.22	□□□□□ -0.77
RACGAP1-223	ENST00000551260	CHADL	Q6NUI6	762 aa		10.22	□□□□□ -0.77
RACGAP1-223	ENST00000551260	SAMD9L	Q8IVG5	1584 aa		10.22	□□□□□ -0.77
RACGAP1-223	ENST00000551260	ZC3H13	Q5T200	1668 aa	Known RBP	10.22	□□□□□ -0.77
RACGAP1-223	ENST00000551260	PLXNC1	O60486	1568 aa		10.2	□□□□□ -0.78
RACGAP1-223	ENST00000551260	NPHP4	O75161	1426 aa	Predicted RBP	10.2	□□□□□ -0.78
RACGAP1-223	ENST00000551260	CFAP65	Q6ZU64	1925 aa	Known RBP	10.2	□□□□□ -0.78
RACGAP1-223	ENST00000551260	TRIM52	Q96A61	297 aa		10.2	□□□□□ -0.78
RACGAP1-223	ENST00000551260	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
RACGAP1-223	ENST00000551260	PHLPP1	O60346	1717 aa		10.19	□□□□□ -0.78
RACGAP1-223	ENST00000551260	CREBZF	Q9NS37	354 aa		10.18	□□□□□ -0.78
RACGAP1-223	ENST00000551260	MED14	O60244	1454 aa		10.17	□□□□□ -0.78
RACGAP1-223	ENST00000551260	GGT6	Q6P531	493 aa		10.17	□□□□□ -0.78
RACGAP1-223	ENST00000551260	ATP1B4	Q9UN42	357 aa	Predicted RBP	10.17	□□□□□ -0.78
RACGAP1-223	ENST00000551260	ADGB	Q8N7X0	1667 aa		10.16	□□□□□ -0.78
RACGAP1-223	ENST00000551260	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.16	□□□□□ -0.78
RACGAP1-223	ENST00000551260	ANKLE2	Q86XL3	938 aa		10.16	□□□□□ -0.78
RACGAP1-223	ENST00000551260	INO80	Q9ULG1	1556 aa	Predicted RBP	10.16	□□□□□ -0.78
RACGAP1-223	ENST00000551260	ATP7A	Q04656	1500 aa		10.16	□□□□□ -0.78
RACGAP1-223	ENST00000551260	TRO	Q12816	1431 aa	Predicted RBP	10.15	□□□□□ -0.79
RACGAP1-223	ENST00000551260	TNR	Q92752	1358 aa		10.14	□□□□□ -0.79
RACGAP1-223	ENST00000551260	UGGT1	Q9NYU2	1555 aa		10.14	□□□□□ -0.79
RACGAP1-223	ENST00000551260	SYCP2	Q9BX26	1530 aa		10.14	□□□□□ -0.79
RACGAP1-223	ENST00000551260	A2M	P01023	1474 aa		10.13	□□□□□ -0.79
RACGAP1-223	ENST00000551260	FAM135B	Q49AJ0	1406 aa		10.13	□□□□□ -0.79
RACGAP1-223	ENST00000551260	SETBP1	Q9Y6X0	1596 aa		10.13	□□□□□ -0.79
RACGAP1-223	ENST00000551260	LRP6	O75581	1613 aa		10.12	□□□□□ -0.79
RACGAP1-223	ENST00000551260	SPAG9	O60271	1321 aa	Known RBP	10.1	□□□□□ -0.79
RACGAP1-223	ENST00000551260	FARP1	Q9Y4F1	1045 aa	Predicted RBP	10.1	□□□□□ -0.79
RACGAP1-223	ENST00000551260	UBR1	Q8IWV7	1749 aa		10.1	□□□□□ -0.79
RACGAP1-223	ENST00000551260	CLIP1	P30622	1438 aa		10.09	□□□□□ -0.79
RACGAP1-223	ENST00000551260	FAM135A	Q9P2D6	1515 aa		10.09	□□□□□ -0.79
RACGAP1-223	ENST00000551260	COL16A1	Q07092	1604 aa	Predicted RBP	10.09	□□□□□ -0.79
RACGAP1-223	ENST00000551260	MNX1	P50219	401 aa	Predicted RBP	10.09	□□□□□ -0.79
RACGAP1-223	ENST00000551260	PZP	P20742	1482 aa		10.09	□□□□□ -0.79
RACGAP1-223	ENST00000551260	HNRNPM	P52272	730 aa	Known RBP eCLIP	10.08	□□□□□ -0.8	9e-9	■■□□□ 14.1
RACGAP1-223	ENST00000551260	THEMIS	Q8N1K5	641 aa	Predicted RBP	10.08	□□□□□ -0.8
RACGAP1-223	ENST00000551260	FBXO3	Q9UK99	471 aa		10.08	□□□□□ -0.8
RACGAP1-223	ENST00000551260	ZNF777	Q9ULD5	760 aa	Predicted RBP	10.08	□□□□□ -0.8
RACGAP1-223	ENST00000551260	CDK11A	Q9UQ88	783 aa	Predicted RBP	10.08	□□□□□ -0.8
RACGAP1-223	ENST00000551260	NLRP1	Q9C000	1473 aa		10.06	□□□□□ -0.8
RACGAP1-223	ENST00000551260	RBM33	Q96EV2	1170 aa	Known RBP	10.06	□□□□□ -0.8
RACGAP1-223	ENST00000551260	MAP3K1	Q13233	1512 aa		10.06	□□□□□ -0.8
RACGAP1-223	ENST00000551260	SHPRH	Q149N8	1683 aa		10.06	□□□□□ -0.8
RACGAP1-223	ENST00000551260	JCAD	Q9P266	1359 aa		10.05	□□□□□ -0.8
RACGAP1-223	ENST00000551260	RXRB	P28702	533 aa		10.05	□□□□□ -0.8
RACGAP1-223	ENST00000551260	KDM5D	Q9BY66	1539 aa		10.05	□□□□□ -0.8
RACGAP1-223	ENST00000551260	MIA2	Q96PC5	1412 aa		10.05	□□□□□ -0.8
RACGAP1-223	ENST00000551260	HAX1	O00165	279 aa		10.04	□□□□□ -0.8
RACGAP1-223	ENST00000551260	MEX3C	Q5U5Q3	659 aa	Known RBP	10.04	□□□□□ -0.8
RACGAP1-223	ENST00000551260	ZNF772	Q68DY9	489 aa	Predicted RBP	10.04	□□□□□ -0.8
RACGAP1-223	ENST00000551260	MIER1	Q8N108	512 aa		10.04	□□□□□ -0.8
RACGAP1-223	ENST00000551260	CDK12	Q9NYV4	1490 aa	Predicted RBP	10.04	□□□□□ -0.8
RACGAP1-223	ENST00000551260	EVX2	Q03828	476 aa		10.03	□□□□□ -0.8

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