RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-223ENST00000551260 AEBP2Q6ZN18 517 aaPredicted RBP19.37■□□□□ 0.69
RACGAP1-223ENST00000551260 CHIC1Q5VXU3 224 aa18.71■□□□□ 0.59
RACGAP1-223ENST00000551260 PHF23Q9BUL5 403 aaPredicted RBP16.48■□□□□ 0.23
RACGAP1-223ENST00000551260 SENP3Q9H4L4 574 aaPredicted RBP16.39■□□□□ 0.21
RACGAP1-223ENST00000551260 NISCHQ9Y2I1 1504 aa15.74■□□□□ 0.11
RACGAP1-223ENST00000551260 FOXD1Q16676 465 aa15.28■□□□□ 0.04
RACGAP1-223ENST00000551260 ABCC9O60706 1549 aa15.12■□□□□ 0.01
RACGAP1-223ENST00000551260 PLPPR3Q6T4P5 718 aa15.09■□□□□ 0.01
RACGAP1-223ENST00000551260 DNAJC5BQ9UF47 199 aa14.79□□□□□ -0.04
RACGAP1-223ENST00000551260 PPP6R1Q9UPN7 881 aa14.6□□□□□ -0.07
RACGAP1-223ENST00000551260 ADRA2BP18089 450 aa14.54□□□□□ -0.08
RACGAP1-223ENST00000551260 CCDC180Q9P1Z9 1646 aa14.48□□□□□ -0.09
RACGAP1-223ENST00000551260 PIAS4Q8N2W9 510 aaPredicted RBP14.33□□□□□ -0.12
RACGAP1-223ENST00000551260 MSH5O43196 834 aa14.1□□□□□ -0.15
RACGAP1-223ENST00000551260 RB1CC1Q8TDY2 1594 aa14.05□□□□□ -0.16
RACGAP1-223ENST00000551260 UNC13AQ9UPW8 1703 aa13.99□□□□□ -0.17
RACGAP1-223ENST00000551260 DNAJC5Q9H3Z4 198 aa13.98□□□□□ -0.17
RACGAP1-223ENST00000551260 PABPN1Q86U42 306 aaKnown RBP eCLIP13.95□□□□□ -0.18
RACGAP1-223ENST00000551260 NACADO15069 1562 aa13.76□□□□□ -0.21
RACGAP1-223ENST00000551260 BICRAQ9NZM4 1560 aa13.75□□□□□ -0.21
RACGAP1-223ENST00000551260 CC2D2AQ9P2K1 1620 aa13.65□□□□□ -0.22
RACGAP1-223ENST00000551260 CECR2Q9BXF3 1484 aa13.64□□□□□ -0.23
RACGAP1-223ENST00000551260 DCAF8L2P0C7V8 631 aa13.58□□□□□ -0.24
RACGAP1-223ENST00000551260 EIF4G1Q04637 1599 aaKnown RBP13.42□□□□□ -0.26
RACGAP1-223ENST00000551260 SHROOM4Q9ULL8 1493 aa13.29□□□□□ -0.28
RACGAP1-223ENST00000551260 PPP4R3CPQ6ZMV5 832 aa13.29□□□□□ -0.28
RACGAP1-223ENST00000551260 MYO15BQ96JP2 1530 aa13.28□□□□□ -0.28
RACGAP1-223ENST00000551260 MAPK8IP2Q13387 824 aaPredicted RBP13.26□□□□□ -0.29
RACGAP1-223ENST00000551260 SCAF1Q9H7N4 1312 aaKnown RBP13.24□□□□□ -0.29
RACGAP1-223ENST00000551260 CUX2O14529 1486 aa13.22□□□□□ -0.29
RACGAP1-223ENST00000551260 SCRIBQ14160 1630 aa13.2□□□□□ -0.3
RACGAP1-223ENST00000551260 POTEDQ86YR6 584 aa13.19□□□□□ -0.3
RACGAP1-223ENST00000551260 TRIM41Q8WV44 630 aa13.16□□□□□ -0.3
RACGAP1-223ENST00000551260 DMRT2Q9Y5R5 561 aa13.08□□□□□ -0.32
RACGAP1-223ENST00000551260 ERCC6Q03468 1493 aa13.04□□□□□ -0.32
RACGAP1-223ENST00000551260 CNKSR2Q8WXI2 1034 aa12.94□□□□□ -0.34
RACGAP1-223ENST00000551260 ZCCHC6Q5VYS8 1495 aaKnown RBP12.9□□□□□ -0.34
RACGAP1-223ENST00000551260 DCAF1Q9Y4B6 1507 aa12.89□□□□□ -0.35
RACGAP1-223ENST00000551260 THOC2Q8NI27 1593 aaKnown RBP12.85□□□□□ -0.35
RACGAP1-223ENST00000551260 NCBP3Q53F19 620 aaKnown RBP12.84□□□□□ -0.35
RACGAP1-223ENST00000551260 NESP48681 1621 aa12.84□□□□□ -0.35
RACGAP1-223ENST00000551260 KCNA4P22459 653 aa12.81□□□□□ -0.36
RACGAP1-223ENST00000551260 HOXD11P31277 338 aaPredicted RBP12.76□□□□□ -0.37
RACGAP1-223ENST00000551260 RNF216Q9NWF9 866 aaPredicted RBP12.74□□□□□ -0.37
RACGAP1-223ENST00000551260 KIF21AQ7Z4S6 1674 aa12.73□□□□□ -0.37
RACGAP1-223ENST00000551260 NPM3O75607 178 aaKnown RBP12.72□□□□□ -0.37
RACGAP1-223ENST00000551260 SMARCA2P51531 1590 aa12.71□□□□□ -0.37
RACGAP1-223ENST00000551260 NCAPD3P42695 1498 aa12.68□□□□□ -0.38
RACGAP1-223ENST00000551260 BAZ1AQ9NRL2 1556 aaPredicted RBP12.64□□□□□ -0.39
RACGAP1-223ENST00000551260 ATAD2BQ9ULI0 1458 aa12.59□□□□□ -0.39
RACGAP1-223ENST00000551260 HMGXB3Q12766 1538 aa12.57□□□□□ -0.4
RACGAP1-223ENST00000551260 LAMC3Q9Y6N6 1575 aa12.56□□□□□ -0.4
RACGAP1-223ENST00000551260 RIMBP3CA6NJZ7 1639 aa12.55□□□□□ -0.4
RACGAP1-223ENST00000551260 RIMBP3BA6NNM3 1639 aa12.55□□□□□ -0.4
RACGAP1-223ENST00000551260 RIMBP3Q9UFD9 1639 aa12.55□□□□□ -0.4
RACGAP1-223ENST00000551260 SMARCA4P51532 1647 aa12.48□□□□□ -0.41
RACGAP1-223ENST00000551260 DCAF8L1A6NGE4 600 aa12.47□□□□□ -0.41
RACGAP1-223ENST00000551260 OSCARQ8IYS5 282 aa12.47□□□□□ -0.41
RACGAP1-223ENST00000551260 WDR62O43379 1518 aa12.44□□□□□ -0.42
RACGAP1-223ENST00000551260 BAZ1BQ9UIG0 1483 aaKnown RBP12.44□□□□□ -0.42
RACGAP1-223ENST00000551260 PDS5BQ9NTI5 1447 aa12.44□□□□□ -0.42
RACGAP1-223ENST00000551260 MRC2Q9UBG0 1479 aa12.43□□□□□ -0.42
RACGAP1-223ENST00000551260 ARHGEF11O15085 1522 aa12.37□□□□□ -0.43
RACGAP1-223ENST00000551260 TRHP20396 242 aaPredicted RBP12.36□□□□□ -0.43
RACGAP1-223ENST00000551260 PEG3Q9GZU2 1588 aa12.3□□□□□ -0.44
RACGAP1-223ENST00000551260 CYB5RLQ6IPT4 315 aa12.28□□□□□ -0.44
RACGAP1-223ENST00000551260 CADPSQ9ULU8 1353 aa12.26□□□□□ -0.45
RACGAP1-223ENST00000551260 CEP164Q9UPV0 1460 aa12.24□□□□□ -0.45
RACGAP1-223ENST00000551260 ARAP1Q96P48 1450 aa12.21□□□□□ -0.45
RACGAP1-223ENST00000551260 CHD1O14646 1710 aa12.2□□□□□ -0.46
RACGAP1-223ENST00000551260 FANCD2Q9BXW9 1451 aa12.18□□□□□ -0.46
RACGAP1-223ENST00000551260 MROH2BQ7Z745 1585 aa12.18□□□□□ -0.46
RACGAP1-223ENST00000551260 URB2Q14146 1524 aaKnown RBP12.16□□□□□ -0.46
RACGAP1-223ENST00000551260 ZNF608Q9ULD9 1512 aaPredicted RBP12.13□□□□□ -0.47
RACGAP1-223ENST00000551260 SLC4A1APQ9BWU0 796 aaKnown RBP12.13□□□□□ -0.47
RACGAP1-223ENST00000551260 ILDR1Q86SU0 546 aaPredicted RBP12.12□□□□□ -0.47
RACGAP1-223ENST00000551260 RNF39Q9H2S5 420 aa12.11□□□□□ -0.47
RACGAP1-223ENST00000551260 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.1□□□□□ -0.475e-9■□□□□ 10.1
RACGAP1-223ENST00000551260 SLC4A2P04920 1241 aa12.08□□□□□ -0.48
RACGAP1-223ENST00000551260 WIZO95785 1651 aa12.07□□□□□ -0.48
RACGAP1-223ENST00000551260 EIF4G3O43432 1585 aaKnown RBP12.06□□□□□ -0.48
RACGAP1-223ENST00000551260 PRDM2Q13029 1718 aa12.05□□□□□ -0.48
RACGAP1-223ENST00000551260 CFTRP13569 1480 aa12□□□□□ -0.49
RACGAP1-223ENST00000551260 RSF1Q96T23 1441 aaPredicted RBP11.99□□□□□ -0.49
RACGAP1-223ENST00000551260 IFT140Q96RY7 1462 aa11.99□□□□□ -0.49
RACGAP1-223ENST00000551260 U3KPZ7 1027 aaPredicted RBP11.94□□□□□ -0.5
RACGAP1-223ENST00000551260 FBLN2P98095 1184 aa11.93□□□□□ -0.5
RACGAP1-223ENST00000551260 C1QBPQ07021 282 aaKnown RBP11.93□□□□□ -0.5
RACGAP1-223ENST00000551260 AQRO60306 1485 aaKnown RBP eCLIP11.91□□□□□ -0.5
RACGAP1-223ENST00000551260 CLASP1Q7Z460 1538 aa11.91□□□□□ -0.5
RACGAP1-223ENST00000551260 KIF13AQ9H1H9 1805 aa11.9□□□□□ -0.5
RACGAP1-223ENST00000551260 TOPBP1Q92547 1522 aa11.89□□□□□ -0.51
RACGAP1-223ENST00000551260 TARBP1Q13395 1621 aaKnown RBP11.89□□□□□ -0.51
RACGAP1-223ENST00000551260 CACNB1Q02641 598 aaPredicted RBP11.88□□□□□ -0.51
RACGAP1-223ENST00000551260 ZBTB22O15209 634 aa11.82□□□□□ -0.52
RACGAP1-223ENST00000551260 SYNJ1O43426 1573 aa11.8□□□□□ -0.52
RACGAP1-223ENST00000551260 FOXD4L1Q9NU39 408 aa11.8□□□□□ -0.52
RACGAP1-223ENST00000551260 DNMBPQ6XZF7 1577 aa11.79□□□□□ -0.52
RACGAP1-223ENST00000551260 GAPVD1Q14C86 1478 aa11.79□□□□□ -0.52
RACGAP1-223ENST00000551260 KDM4FA0A1W2PPD8 638 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms