RNA–Protein interactions for RNA: ENST00000550770.1

PRIM1-206, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-206ENST00000550770 CFDP1Q9UEE9 299 aaPredicted RBP17.68■□□□□ 0.42
PRIM1-206ENST00000550770 LRRC9Q6ZRR7 1453 aa17.68■□□□□ 0.42
PRIM1-206ENST00000550770 MAP3K1Q13233 1512 aa17.67■□□□□ 0.42
PRIM1-206ENST00000550770 KIAA1107Q9UPP5 1409 aa17.67■□□□□ 0.42
PRIM1-206ENST00000550770 PTPRMP28827 1452 aa17.67■□□□□ 0.42
PRIM1-206ENST00000550770 PLEKHH2Q8IVE3 1493 aa17.66■□□□□ 0.42
PRIM1-206ENST00000550770 REREQ9P2R6 1566 aa17.66■□□□□ 0.42
PRIM1-206ENST00000550770 KIDINS220Q9ULH0 1771 aa17.64■□□□□ 0.41
PRIM1-206ENST00000550770 HNRNPMP52272 730 aaKnown RBP eCLIP17.63■□□□□ 0.41
PRIM1-206ENST00000550770 RIMS1Q86UR5 1692 aaKnown RBP17.62■□□□□ 0.41
PRIM1-206ENST00000550770 ZNF644Q9H582 1327 aaPredicted RBP17.62■□□□□ 0.41
PRIM1-206ENST00000550770 KANK4Q5T7N3 995 aaPredicted RBP17.61■□□□□ 0.41
PRIM1-206ENST00000550770 MYT1LQ9UL68 1186 aa17.61■□□□□ 0.41
PRIM1-206ENST00000550770 MBD5Q9P267 1494 aa17.61■□□□□ 0.41
PRIM1-206ENST00000550770 INO80Q9ULG1 1556 aaPredicted RBP17.61■□□□□ 0.41
PRIM1-206ENST00000550770 PRKAR2AP13861 404 aaKnown RBP17.6■□□□□ 0.41
PRIM1-206ENST00000550770 ATP7AQ04656 1500 aa17.59■□□□□ 0.41
PRIM1-206ENST00000550770 MLECQ14165 292 aa17.59■□□□□ 0.41
PRIM1-206ENST00000550770 AGLP35573 1532 aa17.58■□□□□ 0.41
PRIM1-206ENST00000550770 CAMSAP2Q08AD1 1489 aa17.58■□□□□ 0.41
PRIM1-206ENST00000550770 SPAG9O60271 1321 aaKnown RBP17.58■□□□□ 0.4
PRIM1-206ENST00000550770 FER1L4A9Z1Z3 1794 aa17.58■□□□□ 0.4
PRIM1-206ENST00000550770 PLXNC1O60486 1568 aa17.53■□□□□ 0.4
PRIM1-206ENST00000550770 CCDC141Q6ZP82 1450 aa17.53■□□□□ 0.4
PRIM1-206ENST00000550770 MYOM3Q5VTT5 1437 aa17.52■□□□□ 0.4
PRIM1-206ENST00000550770 ARHGEF5Q12774 1597 aa17.51■□□□□ 0.39
PRIM1-206ENST00000550770 RTEL1-TNFRSF6BF6WH68 1400 aa17.5■□□□□ 0.39
PRIM1-206ENST00000550770 A2MP01023 1474 aa17.5■□□□□ 0.39
PRIM1-206ENST00000550770 MIA2Q96PC5 1412 aa17.49■□□□□ 0.39
PRIM1-206ENST00000550770 ADGBQ8N7X0 1667 aa17.48■□□□□ 0.39
PRIM1-206ENST00000550770 CHADLQ6NUI6 762 aa17.48■□□□□ 0.39
PRIM1-206ENST00000550770 LMTK3Q96Q04 1460 aa17.47■□□□□ 0.39
PRIM1-206ENST00000550770 RSPH4AQ5TD94 716 aa17.45■□□□□ 0.38
PRIM1-206ENST00000550770 CEBPAP49715 358 aaPredicted RBP17.43■□□□□ 0.38
PRIM1-206ENST00000550770 MAST1Q9Y2H9 1570 aa17.42■□□□□ 0.38
PRIM1-206ENST00000550770 C3P01024 1663 aa17.42■□□□□ 0.38
PRIM1-206ENST00000550770 DHX29Q7Z478 1369 aaKnown RBP17.41■□□□□ 0.38
PRIM1-206ENST00000550770 CNTLNQ9NXG0 1405 aa17.41■□□□□ 0.38
PRIM1-206ENST00000550770 PTPN23Q9H3S7 1636 aa17.41■□□□□ 0.38
PRIM1-206ENST00000550770 FGD6Q6ZV73 1430 aa17.4■□□□□ 0.38
PRIM1-206ENST00000550770 MROH2AA6NES4 1674 aa17.39■□□□□ 0.37
PRIM1-206ENST00000550770 TCOF1Q13428 1488 aaKnown RBP17.39■□□□□ 0.37
PRIM1-206ENST00000550770 TSPY4P0CV99 314 aa17.38■□□□□ 0.37
PRIM1-206ENST00000550770 TSPY10P0CW01 314 aa17.38■□□□□ 0.37
PRIM1-206ENST00000550770 ESF1Q9H501 851 aaKnown RBP17.38■□□□□ 0.37
PRIM1-206ENST00000550770 PREX1Q8TCU6 1659 aa17.38■□□□□ 0.37
PRIM1-206ENST00000550770 CREBZFQ9NS37 354 aa17.37■□□□□ 0.37
PRIM1-206ENST00000550770 CROCC2H7BZ55 1655 aa17.36■□□□□ 0.37
PRIM1-206ENST00000550770 CLTCQ00610 1675 aaKnown RBP17.36■□□□□ 0.37
PRIM1-206ENST00000550770 SHANK2Q9UPX8 1470 aa17.36■□□□□ 0.37
PRIM1-206ENST00000550770 GGT6Q6P531 493 aa17.35■□□□□ 0.37
PRIM1-206ENST00000550770 FBXO3Q9UK99 471 aa17.35■□□□□ 0.37
PRIM1-206ENST00000550770 ABCC5O15440 1437 aa17.35■□□□□ 0.37
PRIM1-206ENST00000550770 HAX1O00165 279 aa17.34■□□□□ 0.37
PRIM1-206ENST00000550770 DNMT1P26358 1616 aaKnown RBP17.34■□□□□ 0.37
PRIM1-206ENST00000550770 HSPA2P54652 639 aa17.34■□□□□ 0.37
PRIM1-206ENST00000550770 DAPK1P53355 1430 aa17.33■□□□□ 0.36
PRIM1-206ENST00000550770 ZMYM3Q14202 1370 aa17.33■□□□□ 0.36
PRIM1-206ENST00000550770 UHRF1BP1Q6BDS2 1440 aa17.32■□□□□ 0.36
PRIM1-206ENST00000550770 KIF3BO15066 747 aa17.32■□□□□ 0.36
PRIM1-206ENST00000550770 FARP1Q9Y4F1 1045 aaPredicted RBP17.32■□□□□ 0.36
PRIM1-206ENST00000550770 FAM135AQ9P2D6 1515 aa17.31■□□□□ 0.36
PRIM1-206ENST00000550770 NPATQ14207 1427 aa17.3■□□□□ 0.36
PRIM1-206ENST00000550770 RNF17Q9BXT8 1623 aaKnown RBP17.3■□□□□ 0.36
PRIM1-206ENST00000550770 EIF2AK4Q9P2K8 1649 aaKnown RBP17.3■□□□□ 0.36
PRIM1-206ENST00000550770 KDM5DQ9BY66 1539 aa17.3■□□□□ 0.36
PRIM1-206ENST00000550770 PLEKHG5O94827 1062 aa17.29■□□□□ 0.36
PRIM1-206ENST00000550770 PTPRKQ15262 1439 aa17.29■□□□□ 0.36
PRIM1-206ENST00000550770 DUOX2Q9NRD8 1548 aa17.28■□□□□ 0.36
PRIM1-206ENST00000550770 SETD1BQ9UPS6 1966 aaKnown RBP17.27■□□□□ 0.36
PRIM1-206ENST00000550770 KIF15Q9NS87 1388 aa17.27■□□□□ 0.35
PRIM1-206ENST00000550770 MROH1Q8NDA8 1641 aa17.26■□□□□ 0.35
PRIM1-206ENST00000550770 MIER1Q8N108 512 aa17.25■□□□□ 0.35
PRIM1-206ENST00000550770 MYO3AQ8NEV4 1616 aa17.25■□□□□ 0.35
PRIM1-206ENST00000550770 ERBINQ96RT1 1412 aa17.24■□□□□ 0.35
PRIM1-206ENST00000550770 PZPP20742 1482 aa17.23■□□□□ 0.35
PRIM1-206ENST00000550770 WASHC2CQ9Y4E1 1318 aa17.22■□□□□ 0.35
PRIM1-206ENST00000550770 ABCC3O15438 1527 aa17.22■□□□□ 0.35
PRIM1-206ENST00000550770 FAM50AQ14320 339 aaKnown RBP17.22■□□□□ 0.35
PRIM1-206ENST00000550770 ADGRL2O95490 1459 aa17.22■□□□□ 0.35
PRIM1-206ENST00000550770 ZNF142P52746 1687 aaPredicted RBP17.22■□□□□ 0.35
PRIM1-206ENST00000550770 ZC3H13Q5T200 1668 aaKnown RBP17.22■□□□□ 0.35
PRIM1-206ENST00000550770 ANKRD30AQ9BXX3 1397 aa17.21■□□□□ 0.35
PRIM1-206ENST00000550770 PLCD3Q8N3E9 789 aa17.21■□□□□ 0.35
PRIM1-206ENST00000550770 RRP7BPQ9NSQ0 103 aa17.21■□□□□ 0.35
PRIM1-206ENST00000550770 PRDM15P57071 1507 aaPredicted RBP17.21■□□□□ 0.34
PRIM1-206ENST00000550770 NCOA1Q15788 1441 aa17.21■□□□□ 0.34
PRIM1-206ENST00000550770 STRCQ7RTU9 1775 aa17.2■□□□□ 0.34
PRIM1-206ENST00000550770 CHIC2Q9UKJ5 165 aa17.2■□□□□ 0.34
PRIM1-206ENST00000550770 CEP170BQ9Y4F5 1589 aaPredicted RBP17.19■□□□□ 0.34
PRIM1-206ENST00000550770 DEPDC5O75140 1603 aa17.19■□□□□ 0.34
PRIM1-206ENST00000550770 PPARGC1BQ86YN6 1023 aaKnown RBP17.19■□□□□ 0.34
PRIM1-206ENST00000550770 C19orf67A6NJJ6 358 aa17.17■□□□□ 0.34
PRIM1-206ENST00000550770 CEP152O94986 1710 aa17.17■□□□□ 0.34
PRIM1-206ENST00000550770 FBXO31Q5XUX0 539 aaPredicted RBP17.17■□□□□ 0.34
PRIM1-206ENST00000550770 CAMSAP1Q5T5Y3 1602 aa17.16■□□□□ 0.34
PRIM1-206ENST00000550770 TNRQ92752 1358 aa17.15■□□□□ 0.34
PRIM1-206ENST00000550770 A2ML1A8K2U0 1454 aa17.14■□□□□ 0.33
PRIM1-206ENST00000550770 SPATA31D1Q6ZQQ2 1576 aa17.13■□□□□ 0.33
PRIM1-206ENST00000550770 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms