RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 CROCC2H7BZ55 1655 aa20.87■□□□□ 0.93
TROAP-213ENST00000550709 FER1L4A9Z1Z3 1794 aa20.86■□□□□ 0.93
TROAP-213ENST00000550709 ADGRL2O95490 1459 aa20.86■□□□□ 0.93
TROAP-213ENST00000550709 ZMYM3Q14202 1370 aa20.85■□□□□ 0.93
TROAP-213ENST00000550709 ERBINQ96RT1 1412 aa20.84■□□□□ 0.93
TROAP-213ENST00000550709 ROCK1Q13464 1354 aa20.82■□□□□ 0.92
TROAP-213ENST00000550709 ANKRD50Q9ULJ7 1429 aa20.81■□□□□ 0.92
TROAP-213ENST00000550709 FBXO31Q5XUX0 539 aaPredicted RBP20.77■□□□□ 0.92
TROAP-213ENST00000550709 KANK1Q14678 1352 aa20.75■□□□□ 0.91
TROAP-213ENST00000550709 KDM5DQ9BY66 1539 aa20.75■□□□□ 0.91
TROAP-213ENST00000550709 HSPA2P54652 639 aa20.75■□□□□ 0.91
TROAP-213ENST00000550709 EIF2AK4Q9P2K8 1649 aaKnown RBP20.75■□□□□ 0.91
TROAP-213ENST00000550709 CLTCQ00610 1675 aaKnown RBP20.74■□□□□ 0.91
TROAP-213ENST00000550709 RNF17Q9BXT8 1623 aaKnown RBP20.73■□□□□ 0.91
TROAP-213ENST00000550709 ABCC3O15438 1527 aa20.72■□□□□ 0.91
TROAP-213ENST00000550709 C3P01024 1663 aa20.71■□□□□ 0.91
TROAP-213ENST00000550709 MROH1Q8NDA8 1641 aa20.71■□□□□ 0.91
TROAP-213ENST00000550709 NPATQ14207 1427 aa20.7■□□□□ 0.9
TROAP-213ENST00000550709 UHRF1BP1Q6BDS2 1440 aa20.7■□□□□ 0.9
TROAP-213ENST00000550709 LMTK3Q96Q04 1460 aa20.69■□□□□ 0.9
TROAP-213ENST00000550709 FAM135AQ9P2D6 1515 aa20.68■□□□□ 0.9
TROAP-213ENST00000550709 PZPP20742 1482 aa20.68■□□□□ 0.9
TROAP-213ENST00000550709 MROH2AA6NES4 1674 aa20.67■□□□□ 0.9
TROAP-213ENST00000550709 TNRQ92752 1358 aa20.67■□□□□ 0.9
TROAP-213ENST00000550709 NAIPQ13075 1403 aa20.67■□□□□ 0.9
TROAP-213ENST00000550709 PRDM15P57071 1507 aaPredicted RBP20.67■□□□□ 0.9
TROAP-213ENST00000550709 NUP155O75694 1391 aa20.65■□□□□ 0.9
TROAP-213ENST00000550709 HFM1A2PYH4 1435 aa20.62■□□□□ 0.89
TROAP-213ENST00000550709 TRIM52Q96A61 297 aa20.62■□□□□ 0.89
TROAP-213ENST00000550709 DEPDC5O75140 1603 aa20.61■□□□□ 0.89
TROAP-213ENST00000550709 ARHGAP31Q2M1Z3 1444 aa20.6■□□□□ 0.89
TROAP-213ENST00000550709 VWDEQ8N2E2 1590 aa20.59■□□□□ 0.89
TROAP-213ENST00000550709 CEP152O94986 1710 aa20.58■□□□□ 0.89
TROAP-213ENST00000550709 ZC3H13Q5T200 1668 aaKnown RBP20.58■□□□□ 0.89
TROAP-213ENST00000550709 ERVK-7P63135 1459 aa20.58■□□□□ 0.89
TROAP-213ENST00000550709 SETD1BQ9UPS6 1966 aaKnown RBP20.58■□□□□ 0.89
TROAP-213ENST00000550709 LMTK2Q8IWU2 1503 aa20.58■□□□□ 0.88
TROAP-213ENST00000550709 PREX1Q8TCU6 1659 aa20.57■□□□□ 0.88
TROAP-213ENST00000550709 CAMSAP1Q5T5Y3 1602 aa20.56■□□□□ 0.88
TROAP-213ENST00000550709 UNC13BO14795 1591 aa20.54■□□□□ 0.88
TROAP-213ENST00000550709 A2ML1A8K2U0 1454 aa20.53■□□□□ 0.88
TROAP-213ENST00000550709 SPATA31D1Q6ZQQ2 1576 aa20.52■□□□□ 0.88
TROAP-213ENST00000550709 EFCAB6Q5THR3 1501 aa20.52■□□□□ 0.87
TROAP-213ENST00000550709 NCKAP5LQ9HCH0 1330 aa20.51■□□□□ 0.87
TROAP-213ENST00000550709 CEP170BQ9Y4F5 1589 aaPredicted RBP20.51■□□□□ 0.87
TROAP-213ENST00000550709 NLRP1Q9C000 1473 aa20.5■□□□□ 0.87
TROAP-213ENST00000550709 MYO3AQ8NEV4 1616 aa20.5■□□□□ 0.87
TROAP-213ENST00000550709 IDI1Q13907 227 aa20.5■□□□□ 0.87
TROAP-213ENST00000550709 THEMISQ8N1K5 641 aaPredicted RBP20.5■□□□□ 0.87
TROAP-213ENST00000550709 STAG3Q9UJ98 1225 aa20.5■□□□□ 0.87
TROAP-213ENST00000550709 SETD5Q9C0A6 1442 aa20.5■□□□□ 0.87
TROAP-213ENST00000550709 SLC4A1APQ9BWU0 796 aaKnown RBP20.49■□□□□ 0.87
TROAP-213ENST00000550709 NOS1P29475 1434 aa20.48■□□□□ 0.87
TROAP-213ENST00000550709 GCC2Q8IWJ2 1684 aa20.48■□□□□ 0.87
TROAP-213ENST00000550709 PKD2Q13563 968 aa20.47■□□□□ 0.87
TROAP-213ENST00000550709 RPRD2Q5VT52 1461 aaKnown RBP20.46■□□□□ 0.87
TROAP-213ENST00000550709 SLC52A1Q9NWF4 448 aa20.46■□□□□ 0.87
TROAP-213ENST00000550709 CFAP65Q6ZU64 1925 aaKnown RBP20.46■□□□□ 0.87
TROAP-213ENST00000550709 IQGAP3Q86VI3 1631 aa20.45■□□□□ 0.87
TROAP-213ENST00000550709 TET3O43151 1660 aa20.45■□□□□ 0.86
TROAP-213ENST00000550709 RAB3GAP2Q9H2M9 1393 aa20.45■□□□□ 0.86
TROAP-213ENST00000550709 UGGT1Q9NYU2 1555 aa20.44■□□□□ 0.86
TROAP-213ENST00000550709 CHGAP10645 457 aaKnown RBP20.44■□□□□ 0.86
TROAP-213ENST00000550709 DMRT2Q9Y5R5 561 aa20.44■□□□□ 0.86
TROAP-213ENST00000550709 ANKLE2Q86XL3 938 aa20.43■□□□□ 0.86
TROAP-213ENST00000550709 FOXD1Q16676 465 aa20.42■□□□□ 0.86
TROAP-213ENST00000550709 MPHOSPH9Q99550 1183 aa20.41■□□□□ 0.86
TROAP-213ENST00000550709 SYNMO15061 1565 aa20.41■□□□□ 0.86
TROAP-213ENST00000550709 ZNF142P52746 1687 aaPredicted RBP20.41■□□□□ 0.86
TROAP-213ENST00000550709 PLA2R1Q13018 1463 aa20.39■□□□□ 0.85
TROAP-213ENST00000550709 E9PCH4 1651 aa20.38■□□□□ 0.85
TROAP-213ENST00000550709 TXNDC2Q86VQ3 553 aa20.37■□□□□ 0.85
TROAP-213ENST00000550709 ACIN1Q9UKV3 1341 aaKnown RBP20.35■□□□□ 0.85
TROAP-213ENST00000550709 LTKP29376 864 aa20.35■□□□□ 0.85
TROAP-213ENST00000550709 EID1Q9Y6B2 187 aa20.35■□□□□ 0.85
TROAP-213ENST00000550709 PTPRTO14522 1441 aa20.35■□□□□ 0.85
TROAP-213ENST00000550709 STRCQ7RTU9 1775 aa20.34■□□□□ 0.85
TROAP-213ENST00000550709 TMEM2Q9UHN6 1383 aa20.34■□□□□ 0.85
TROAP-213ENST00000550709 TRIM26Q12899 539 aaPredicted RBP20.33■□□□□ 0.85
TROAP-213ENST00000550709 SENP3Q9H4L4 574 aaPredicted RBP20.33■□□□□ 0.85
TROAP-213ENST00000550709 PIK3C2BO00750 1634 aa20.33■□□□□ 0.84
TROAP-213ENST00000550709 HRCP23327 699 aa20.31■□□□□ 0.84
TROAP-213ENST00000550709 NUTM2DQ5VT03 806 aaPredicted RBP20.3■□□□□ 0.84
TROAP-213ENST00000550709 NPHP4O75161 1426 aaPredicted RBP20.29■□□□□ 0.84
TROAP-213ENST00000550709 ADGRB3O60242 1522 aa20.29■□□□□ 0.84
TROAP-213ENST00000550709 ZNF326Q5BKZ1 582 aaKnown RBP20.29■□□□□ 0.84
TROAP-213ENST00000550709 UBR1Q8IWV7 1749 aa20.29■□□□□ 0.84
TROAP-213ENST00000550709 PPP1R15AO75807 674 aaPredicted RBP20.28■□□□□ 0.84
TROAP-213ENST00000550709 BCANQ96GW7 911 aa20.28■□□□□ 0.84
TROAP-213ENST00000550709 SCAF11Q99590 1463 aaKnown RBP20.28■□□□□ 0.84
TROAP-213ENST00000550709 ARHGAP23Q9P227 1491 aa20.28■□□□□ 0.84
TROAP-213ENST00000550709 SLIT1O75093 1534 aa20.27■□□□□ 0.83
TROAP-213ENST00000550709 ZNF335Q9H4Z2 1342 aaPredicted RBP20.27■□□□□ 0.83
TROAP-213ENST00000550709 HDGFP51858 240 aaKnown RBP20.26■□□□□ 0.83
TROAP-213ENST00000550709 RIMS2Q9UQ26 1411 aa20.26■□□□□ 0.83
TROAP-213ENST00000550709 TRPM2O94759 1503 aa20.24■□□□□ 0.83
TROAP-213ENST00000550709 NEURL4Q96JN8 1562 aa20.24■□□□□ 0.83
TROAP-213ENST00000550709 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.23■□□□□ 0.83
TROAP-213ENST00000550709 MED14O60244 1454 aa20.23■□□□□ 0.83
TROAP-213ENST00000550709 SLC26A8Q96RN1 970 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms