RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 KIF3BO15066 747 aa29.36■■■□□ 2.29
PRDM4-205ENST00000550376 CCDC144AA2RUR9 1427 aa29.35■■■□□ 2.29
PRDM4-205ENST00000550376 RTEL1-TNFRSF6BF6WH68 1400 aa29.32■■■□□ 2.28
PRDM4-205ENST00000550376 POLR3GLQ9BT43 218 aa29.32■■■□□ 2.28
PRDM4-205ENST00000550376 SPATA31E1Q6ZUB1 1445 aa29.32■■■□□ 2.28
PRDM4-205ENST00000550376 ATP7AQ04656 1500 aa29.29■■■□□ 2.28
PRDM4-205ENST00000550376 CARD11Q9BXL7 1154 aa29.29■■■□□ 2.28
PRDM4-205ENST00000550376 IQGAP3Q86VI3 1631 aa29.28■■■□□ 2.28
PRDM4-205ENST00000550376 USP47Q96K76 1375 aa29.27■■■□□ 2.28
PRDM4-205ENST00000550376 CCDC7Q96M83 1385 aa29.27■■■□□ 2.28
PRDM4-205ENST00000550376 KIF7Q2M1P5 1343 aa29.26■■■□□ 2.28
PRDM4-205ENST00000550376 RAPGEF3O95398 923 aa29.26■■■□□ 2.27
PRDM4-205ENST00000550376 MAGI2Q86UL8 1455 aa29.24■■■□□ 2.27
PRDM4-205ENST00000550376 CNGB1Q14028 1251 aaPredicted RBP29.22■■■□□ 2.27
PRDM4-205ENST00000550376 NBPF1Q3BBV0 1214 aa29.21■■■□□ 2.27
PRDM4-205ENST00000550376 UHRF1BP1Q6BDS2 1440 aa29.21■■■□□ 2.27
PRDM4-205ENST00000550376 INO80Q9ULG1 1556 aaPredicted RBP29.2■■■□□ 2.27
PRDM4-205ENST00000550376 DHX29Q7Z478 1369 aaKnown RBP29.2■■■□□ 2.26
PRDM4-205ENST00000550376 ST20-MTHFSA0A0A6YYL1 179 aa29.17■■■□□ 2.26
PRDM4-205ENST00000550376 ROCK2O75116 1388 aaKnown RBP29.15■■■□□ 2.26
PRDM4-205ENST00000550376 A2MP01023 1474 aa29.14■■■□□ 2.26
PRDM4-205ENST00000550376 ZNF518AQ6AHZ1 1483 aa29.14■■■□□ 2.26
PRDM4-205ENST00000550376 RALGAPBQ86X10 1494 aa29.14■■■□□ 2.26
PRDM4-205ENST00000550376 CCER2I3L3R5 266 aa29.13■■■□□ 2.25
PRDM4-205ENST00000550376 GGT6Q6P531 493 aa29.13■■■□□ 2.25
PRDM4-205ENST00000550376 KIDINS220Q9ULH0 1771 aa29.13■■■□□ 2.25
PRDM4-205ENST00000550376 CNTLNQ9NXG0 1405 aa29.12■■■□□ 2.25
PRDM4-205ENST00000550376 KANK1Q14678 1352 aa29.11■■■□□ 2.25
PRDM4-205ENST00000550376 E9PCH4 1651 aa29.1■■■□□ 2.25
PRDM4-205ENST00000550376 PRAG1Q86YV5 1406 aa29.1■■■□□ 2.25
PRDM4-205ENST00000550376 BCORL1Q5H9F3 1711 aa29.1■■■□□ 2.25
PRDM4-205ENST00000550376 RIMBP3CA6NJZ7 1639 aa29.1■■■□□ 2.25
PRDM4-205ENST00000550376 RIMBP3BA6NNM3 1639 aa29.1■■■□□ 2.25
PRDM4-205ENST00000550376 RIMBP3Q9UFD9 1639 aa29.1■■■□□ 2.25
PRDM4-205ENST00000550376 POGZQ7Z3K3 1410 aa29.1■■■□□ 2.25
PRDM4-205ENST00000550376 KDM5CP41229 1560 aa29.09■■■□□ 2.25
PRDM4-205ENST00000550376 FAM69CQ0P6D2 419 aa29.08■■■□□ 2.25
PRDM4-205ENST00000550376 CCDC184Q52MB2 194 aa29.08■■■□□ 2.25
PRDM4-205ENST00000550376 ATP10AO60312 1499 aa29.07■■■□□ 2.24
PRDM4-205ENST00000550376 DEPDC5O75140 1603 aa29.03■■■□□ 2.24
PRDM4-205ENST00000550376 PRKRIP1Q9H875 184 aaPredicted RBP29.01■■■□□ 2.23
PRDM4-205ENST00000550376 MROH1Q8NDA8 1641 aa29■■■□□ 2.23
PRDM4-205ENST00000550376 UGGT1Q9NYU2 1555 aa28.98■■■□□ 2.23
PRDM4-205ENST00000550376 PTPRTO14522 1441 aa28.97■■■□□ 2.23
PRDM4-205ENST00000550376 VWDEQ8N2E2 1590 aa28.96■■■□□ 2.23
PRDM4-205ENST00000550376 MLH3Q9UHC1 1453 aa28.96■■■□□ 2.23
PRDM4-205ENST00000550376 CFAP74Q9C0B2 1584 aa28.95■■■□□ 2.22
PRDM4-205ENST00000550376 TRPM1Q7Z4N2 1603 aa28.94■■■□□ 2.22
PRDM4-205ENST00000550376 TET3O43151 1660 aa28.94■■■□□ 2.22
PRDM4-205ENST00000550376 NEO1Q92859 1461 aa28.94■■■□□ 2.22
PRDM4-205ENST00000550376 PRDM15P57071 1507 aaPredicted RBP28.94■■■□□ 2.22
PRDM4-205ENST00000550376 FRMPD1Q5SYB0 1578 aa28.94■■■□□ 2.22
PRDM4-205ENST00000550376 CLTCL1P53675 1640 aa28.94■■■□□ 2.22
PRDM4-205ENST00000550376 TRPM2O94759 1503 aa28.94■■■□□ 2.22
PRDM4-205ENST00000550376 CHGAP10645 457 aaKnown RBP28.92■■■□□ 2.22
PRDM4-205ENST00000550376 WASHC2CQ9Y4E1 1318 aa28.92■■■□□ 2.22
PRDM4-205ENST00000550376 HECW2Q9P2P5 1572 aa28.92■■■□□ 2.22
PRDM4-205ENST00000550376 SPHKAPQ2M3C7 1700 aa28.91■■■□□ 2.22
PRDM4-205ENST00000550376 EIF2AK4Q9P2K8 1649 aaKnown RBP28.91■■■□□ 2.22
PRDM4-205ENST00000550376 CFAP65Q6ZU64 1925 aaKnown RBP28.9■■■□□ 2.22
PRDM4-205ENST00000550376 ABCA6Q8N139 1617 aa28.9■■■□□ 2.22
PRDM4-205ENST00000550376 YEATS2Q9ULM3 1422 aa28.89■■■□□ 2.22
PRDM4-205ENST00000550376 POLR1AO95602 1720 aaPredicted RBP28.87■■■□□ 2.21
PRDM4-205ENST00000550376 MAP3K4Q9Y6R4 1608 aa28.87■■■□□ 2.21
PRDM4-205ENST00000550376 FAM9BQ8IZU0 186 aa28.86■■■□□ 2.21
PRDM4-205ENST00000550376 MRS2Q9HD23 443 aa28.86■■■□□ 2.21
PRDM4-205ENST00000550376 GPRASP1Q5JY77 1395 aa28.85■■■□□ 2.21
PRDM4-205ENST00000550376 PPRC1Q5VV67 1664 aaKnown RBP28.85■■■□□ 2.21
PRDM4-205ENST00000550376 CEP152O94986 1710 aa28.85■■■□□ 2.21
PRDM4-205ENST00000550376 HNRNPUQ00839 825 aaKnown RBP eCLIP28.83■■■□□ 2.21
PRDM4-205ENST00000550376 TESK2Q96S53 571 aa28.83■■■□□ 2.21
PRDM4-205ENST00000550376 TSPOAP1O95153 1857 aa28.83■■■□□ 2.21
PRDM4-205ENST00000550376 EFCAB6Q5THR3 1501 aa28.83■■■□□ 2.21
PRDM4-205ENST00000550376 ARID4BQ4LE39 1312 aaPredicted RBP28.82■■■□□ 2.2
PRDM4-205ENST00000550376 NPATQ14207 1427 aa28.81■■■□□ 2.2
PRDM4-205ENST00000550376 ADGRF5Q8IZF2 1346 aa28.81■■■□□ 2.2
PRDM4-205ENST00000550376 DISP3Q9P2K9 1392 aa28.8■■■□□ 2.2
PRDM4-205ENST00000550376 CFAP70Q5T0N1 1121 aa28.79■■■□□ 2.2
PRDM4-205ENST00000550376 SENP3Q9H4L4 574 aaPredicted RBP28.78■■■□□ 2.2
PRDM4-205ENST00000550376 DIP2CQ9Y2E4 1556 aa28.77■■■□□ 2.2
PRDM4-205ENST00000550376 RNF17Q9BXT8 1623 aaKnown RBP28.76■■■□□ 2.2
PRDM4-205ENST00000550376 DIP2BQ9P265 1576 aa28.76■■■□□ 2.2
PRDM4-205ENST00000550376 NUTM2DQ5VT03 806 aaPredicted RBP28.76■■■□□ 2.2
PRDM4-205ENST00000550376 RICTORQ6R327 1708 aa28.76■■■□□ 2.19
PRDM4-205ENST00000550376 GLI2P10070 1586 aa28.75■■■□□ 2.19
PRDM4-205ENST00000550376 MADDQ8WXG6 1647 aa28.75■■■□□ 2.19
PRDM4-205ENST00000550376 LMTK2Q8IWU2 1503 aa28.73■■■□□ 2.19
PRDM4-205ENST00000550376 SENP3-EIF4A1A0A087X0R7 540 aa28.72■■■□□ 2.19
PRDM4-205ENST00000550376 ABCC3O15438 1527 aa28.71■■■□□ 2.19
PRDM4-205ENST00000550376 TMF1P82094 1093 aa28.68■■■□□ 2.18
PRDM4-205ENST00000550376 NOS1P29475 1434 aa28.65■■■□□ 2.18
PRDM4-205ENST00000550376 MLECQ14165 292 aa28.65■■■□□ 2.18
PRDM4-205ENST00000550376 MROH2AA6NES4 1674 aa28.65■■■□□ 2.18
PRDM4-205ENST00000550376 PANK3Q9H999 370 aa28.64■■■□□ 2.18
PRDM4-205ENST00000550376 STAC3Q96MF2 364 aa28.63■■■□□ 2.17
PRDM4-205ENST00000550376 COL17A1Q9UMD9 1497 aaPredicted RBP28.63■■■□□ 2.17
PRDM4-205ENST00000550376 FBXO31Q5XUX0 539 aaPredicted RBP28.63■■■□□ 2.17
PRDM4-205ENST00000550376 KIF1BO60333 1816 aa28.63■■■□□ 2.17
PRDM4-205ENST00000550376 SUPT16HQ9Y5B9 1047 aaKnown RBP28.62■■■□□ 2.17
PRDM4-205ENST00000550376 LAMC1P11047 1609 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms