RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 GCC2Q8IWJ2 1684 aa25.93■■□□□ 1.74
BRF1-217ENST00000550375 ESF1Q9H501 851 aaKnown RBP25.91■■□□□ 1.74
BRF1-217ENST00000550375 NAIPQ13075 1403 aa25.9■■□□□ 1.74
BRF1-217ENST00000550375 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.89■■□□□ 1.74
BRF1-217ENST00000550375 HFM1A2PYH4 1435 aa25.89■■□□□ 1.73
BRF1-217ENST00000550375 CLTCQ00610 1675 aaKnown RBP25.88■■□□□ 1.73
BRF1-217ENST00000550375 MROH1Q8NDA8 1641 aa25.88■■□□□ 1.73
BRF1-217ENST00000550375 DEPDC5O75140 1603 aa25.86■■□□□ 1.73
BRF1-217ENST00000550375 PLPPR3Q6T4P5 718 aa25.85■■□□□ 1.73
BRF1-217ENST00000550375 PPP6R1Q9UPN7 881 aa25.83■■□□□ 1.73
BRF1-217ENST00000550375 PRDM15P57071 1507 aaPredicted RBP25.83■■□□□ 1.73
BRF1-217ENST00000550375 WASHC2CQ9Y4E1 1318 aa25.83■■□□□ 1.73
BRF1-217ENST00000550375 CEP152O94986 1710 aa25.82■■□□□ 1.72
BRF1-217ENST00000550375 PTPRMP28827 1452 aa25.82■■□□□ 1.72
BRF1-217ENST00000550375 KDM5DQ9BY66 1539 aa25.82■■□□□ 1.72
BRF1-217ENST00000550375 TRIM26Q12899 539 aaPredicted RBP25.82■■□□□ 1.72
BRF1-217ENST00000550375 ILDR1Q86SU0 546 aaPredicted RBP25.81■■□□□ 1.72
BRF1-217ENST00000550375 KANK1Q14678 1352 aa25.8■■□□□ 1.72
BRF1-217ENST00000550375 CNTLNQ9NXG0 1405 aa25.8■■□□□ 1.72
BRF1-217ENST00000550375 UNC13BO14795 1591 aa25.8■■□□□ 1.72
BRF1-217ENST00000550375 MROH2AA6NES4 1674 aa25.79■■□□□ 1.72
BRF1-217ENST00000550375 ABCC3O15438 1527 aa25.79■■□□□ 1.72
BRF1-217ENST00000550375 ZC3H13Q5T200 1668 aaKnown RBP25.78■■□□□ 1.72
BRF1-217ENST00000550375 CEBPAP49715 358 aaPredicted RBP25.78■■□□□ 1.72
BRF1-217ENST00000550375 C3P01024 1663 aa25.78■■□□□ 1.72
BRF1-217ENST00000550375 FAM135AQ9P2D6 1515 aa25.77■■□□□ 1.72
BRF1-217ENST00000550375 SETD5Q9C0A6 1442 aa25.77■■□□□ 1.72
BRF1-217ENST00000550375 ZMYM3Q14202 1370 aa25.75■■□□□ 1.71
BRF1-217ENST00000550375 VWDEQ8N2E2 1590 aa25.75■■□□□ 1.71
BRF1-217ENST00000550375 CAMSAP1Q5T5Y3 1602 aa25.73■■□□□ 1.71
BRF1-217ENST00000550375 NUP155O75694 1391 aa25.73■■□□□ 1.71
BRF1-217ENST00000550375 TRIM52Q96A61 297 aa25.71■■□□□ 1.71
BRF1-217ENST00000550375 CFAP65Q6ZU64 1925 aaKnown RBP25.7■■□□□ 1.71
BRF1-217ENST00000550375 IQGAP3Q86VI3 1631 aa25.7■■□□□ 1.7
BRF1-217ENST00000550375 RAB3GAP2Q9H2M9 1393 aa25.69■■□□□ 1.7
BRF1-217ENST00000550375 LMTK2Q8IWU2 1503 aa25.68■■□□□ 1.7
BRF1-217ENST00000550375 TET3O43151 1660 aa25.66■■□□□ 1.7
BRF1-217ENST00000550375 PZPP20742 1482 aa25.64■■□□□ 1.7
BRF1-217ENST00000550375 FBXO31Q5XUX0 539 aaPredicted RBP25.64■■□□□ 1.69
BRF1-217ENST00000550375 EFCAB6Q5THR3 1501 aa25.63■■□□□ 1.69
BRF1-217ENST00000550375 NPATQ14207 1427 aa25.6■■□□□ 1.69
BRF1-217ENST00000550375 ARHGAP31Q2M1Z3 1444 aa25.6■■□□□ 1.69
BRF1-217ENST00000550375 E9PCH4 1651 aa25.59■■□□□ 1.69
BRF1-217ENST00000550375 PREX1Q8TCU6 1659 aa25.59■■□□□ 1.69
BRF1-217ENST00000550375 SETD1BQ9UPS6 1966 aaKnown RBP25.58■■□□□ 1.69
BRF1-217ENST00000550375 SLC4A1APQ9BWU0 796 aaKnown RBP25.56■■□□□ 1.68
BRF1-217ENST00000550375 PCGF6Q9BYE7 350 aa25.56■■□□□ 1.68
BRF1-217ENST00000550375 ERVK-7P63135 1459 aa25.55■■□□□ 1.68
BRF1-217ENST00000550375 ACIN1Q9UKV3 1341 aaKnown RBP25.55■■□□□ 1.68
BRF1-217ENST00000550375 HRCP23327 699 aa25.54■■□□□ 1.68
BRF1-217ENST00000550375 SPATA31D1Q6ZQQ2 1576 aa25.54■■□□□ 1.68
BRF1-217ENST00000550375 TNRQ92752 1358 aa25.53■■□□□ 1.68
BRF1-217ENST00000550375 RPRD2Q5VT52 1461 aaKnown RBP25.52■■□□□ 1.68
BRF1-217ENST00000550375 PKD2Q13563 968 aa25.52■■□□□ 1.68
BRF1-217ENST00000550375 MPHOSPH9Q99550 1183 aa25.52■■□□□ 1.68
BRF1-217ENST00000550375 MYO3AQ8NEV4 1616 aa25.5■■□□□ 1.67
BRF1-217ENST00000550375 UHRF1BP1Q6BDS2 1440 aa25.48■■□□□ 1.67
BRF1-217ENST00000550375 SYNMO15061 1565 aa25.47■■□□□ 1.67
BRF1-217ENST00000550375 FOXD1Q16676 465 aa25.46■■□□□ 1.67
BRF1-217ENST00000550375 NOS1P29475 1434 aa25.46■■□□□ 1.67
BRF1-217ENST00000550375 SPHKAPQ2M3C7 1700 aa25.45■■□□□ 1.67
BRF1-217ENST00000550375 LMTK3Q96Q04 1460 aa25.43■■□□□ 1.66
BRF1-217ENST00000550375 CEP170BQ9Y4F5 1589 aaPredicted RBP25.42■■□□□ 1.66
BRF1-217ENST00000550375 ZNF142P52746 1687 aaPredicted RBP25.41■■□□□ 1.66
BRF1-217ENST00000550375 NLRP1Q9C000 1473 aa25.41■■□□□ 1.66
BRF1-217ENST00000550375 UGGT1Q9NYU2 1555 aa25.39■■□□□ 1.66
BRF1-217ENST00000550375 A2ML1A8K2U0 1454 aa25.39■■□□□ 1.66
BRF1-217ENST00000550375 PTPRTO14522 1441 aa25.38■■□□□ 1.65
BRF1-217ENST00000550375 HSPA2P54652 639 aa25.38■■□□□ 1.65
BRF1-217ENST00000550375 IDI1Q13907 227 aa25.38■■□□□ 1.65
BRF1-217ENST00000550375 PIK3C2BO00750 1634 aa25.38■■□□□ 1.65
BRF1-217ENST00000550375 PLA2R1Q13018 1463 aa25.35■■□□□ 1.65
BRF1-217ENST00000550375 SLC52A1Q9NWF4 448 aa25.35■■□□□ 1.65
BRF1-217ENST00000550375 TRPM2O94759 1503 aa25.35■■□□□ 1.65
BRF1-217ENST00000550375 STAG3Q9UJ98 1225 aa25.33■■□□□ 1.65
BRF1-217ENST00000550375 UBR1Q8IWV7 1749 aa25.33■■□□□ 1.65
BRF1-217ENST00000550375 CLTCL1P53675 1640 aa25.33■■□□□ 1.64
BRF1-217ENST00000550375 MYO5BQ9ULV0 1848 aa25.31■■□□□ 1.64
BRF1-217ENST00000550375 CHGAP10645 457 aaKnown RBP25.31■■□□□ 1.64
BRF1-217ENST00000550375 ADGRB3O60242 1522 aa25.28■■□□□ 1.64
BRF1-217ENST00000550375 THEMISQ8N1K5 641 aaPredicted RBP25.28■■□□□ 1.64
BRF1-217ENST00000550375 KIF1BO60333 1816 aa25.27■■□□□ 1.64
BRF1-217ENST00000550375 TMEM131LA2VDJ0 1609 aa25.26■■□□□ 1.63
BRF1-217ENST00000550375 FBXO41Q8TF61 875 aa25.26■■□□□ 1.63
BRF1-217ENST00000550375 KDM5AP29375 1690 aaKnown RBP25.25■■□□□ 1.63
BRF1-217ENST00000550375 CCDC144AA2RUR9 1427 aa25.25■■□□□ 1.63
BRF1-217ENST00000550375 DHX57Q6P158 1386 aaKnown RBP25.24■■□□□ 1.63
BRF1-217ENST00000550375 ANKRD30BQ9BXX2 1392 aa25.24■■□□□ 1.63
BRF1-217ENST00000550375 STRCQ7RTU9 1775 aa25.2■■□□□ 1.62
BRF1-217ENST00000550375 NCKAP5LQ9HCH0 1330 aa25.18■■□□□ 1.62
BRF1-217ENST00000550375 ZNF326Q5BKZ1 582 aaKnown RBP25.18■■□□□ 1.62
BRF1-217ENST00000550375 TMEM2Q9UHN6 1383 aa25.17■■□□□ 1.62
BRF1-217ENST00000550375 POLR1AO95602 1720 aaPredicted RBP25.17■■□□□ 1.62
BRF1-217ENST00000550375 SLIT1O75093 1534 aa25.16■■□□□ 1.62
BRF1-217ENST00000550375 ARHGAP23Q9P227 1491 aa25.15■■□□□ 1.62
BRF1-217ENST00000550375 ANKLE2Q86XL3 938 aa25.15■■□□□ 1.62
BRF1-217ENST00000550375 TXNDC2Q86VQ3 553 aa25.13■■□□□ 1.61
BRF1-217ENST00000550375 RIMS2Q9UQ26 1411 aa25.12■■□□□ 1.61
BRF1-217ENST00000550375 LTKP29376 864 aa25.12■■□□□ 1.61
BRF1-217ENST00000550375 RGL3Q3MIN7 710 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms