RNA–Protein interactions for RNA: ENST00000549525.1

COX6A1-202, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

Gene COX6A1, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-202ENST00000549525 DDX12PQ92771 950 aa11.28□□□□□ -0.6
COX6A1-202ENST00000549525 PCDHGA10Q9Y5H3 936 aa11.28□□□□□ -0.6
COX6A1-202ENST00000549525 SEMA3EO15041 775 aa11.27□□□□□ -0.61
COX6A1-202ENST00000549525 PSDA5PKW4 1024 aaPredicted RBP11.26□□□□□ -0.61
COX6A1-202ENST00000549525 MLLT3P42568 568 aaPredicted RBP11.26□□□□□ -0.61
COX6A1-202ENST00000549525 PPP4R3BQ5MIZ7 849 aa11.25□□□□□ -0.61
COX6A1-202ENST00000549525 PHF14O94880 888 aa11.24□□□□□ -0.61
COX6A1-202ENST00000549525 PRIM1P49642 420 aaKnown RBP11.24□□□□□ -0.61
COX6A1-202ENST00000549525 POTEEQ6S8J3 1075 aa11.24□□□□□ -0.61
COX6A1-202ENST00000549525 ZNF687Q8N1G0 1237 aa11.24□□□□□ -0.61
COX6A1-202ENST00000549525 PCDH10Q9P2E7 1040 aa11.23□□□□□ -0.61
COX6A1-202ENST00000549525 CCDC88BA6NC98 1476 aa11.23□□□□□ -0.61
COX6A1-202ENST00000549525 GRXCR2A6NFK2 248 aa11.22□□□□□ -0.61
COX6A1-202ENST00000549525 CDAN1Q8IWY9 1227 aa11.22□□□□□ -0.61
COX6A1-202ENST00000549525 CADPSQ9ULU8 1353 aa11.21□□□□□ -0.61
COX6A1-202ENST00000549525 NBR1Q14596 966 aa11.21□□□□□ -0.61
COX6A1-202ENST00000549525 ZDHHC16Q969W1 377 aa11.21□□□□□ -0.61
COX6A1-202ENST00000549525 ADAM33Q9BZ11 813 aa11.21□□□□□ -0.61
COX6A1-202ENST00000549525 TESPA1A2RU30 521 aaPredicted RBP11.2□□□□□ -0.62
COX6A1-202ENST00000549525 OSBPP22059 807 aa11.2□□□□□ -0.62
COX6A1-202ENST00000549525 TYW1BQ6NUM6 668 aa11.2□□□□□ -0.62
COX6A1-202ENST00000549525 EPAS1Q99814 870 aa11.19□□□□□ -0.62
COX6A1-202ENST00000549525 KRTAP3-3Q9BYR6 98 aa11.19□□□□□ -0.62
COX6A1-202ENST00000549525 KRTAP3-2Q9BYR7 98 aa11.19□□□□□ -0.62
COX6A1-202ENST00000549525 AXIN2Q9Y2T1 843 aa11.19□□□□□ -0.62
COX6A1-202ENST00000549525 FBXW7Q969H0 707 aa11.18□□□□□ -0.62
COX6A1-202ENST00000549525 BCL2L12Q9HB09 334 aa11.18□□□□□ -0.62
COX6A1-202ENST00000549525 LAMC3Q9Y6N6 1575 aa11.17□□□□□ -0.62
COX6A1-202ENST00000549525 RBM33Q96EV2 1170 aaKnown RBP11.17□□□□□ -0.62
COX6A1-202ENST00000549525 PDS5BQ9NTI5 1447 aa11.17□□□□□ -0.62
COX6A1-202ENST00000549525 EN1Q05925 392 aaPredicted RBP11.16□□□□□ -0.62
COX6A1-202ENST00000549525 CFTRP13569 1480 aa11.16□□□□□ -0.62
COX6A1-202ENST00000549525 PSEN2P49810 448 aa11.15□□□□□ -0.62
COX6A1-202ENST00000549525 KCNK17Q96T54 332 aa11.15□□□□□ -0.62
COX6A1-202ENST00000549525 PBX2P40425 430 aa11.14□□□□□ -0.63
COX6A1-202ENST00000549525 TSR1Q2NL82 804 aaKnown RBP11.14□□□□□ -0.63
COX6A1-202ENST00000549525 ARHGAP33O14559 1287 aa11.13□□□□□ -0.63
COX6A1-202ENST00000549525 C6orf132Q5T0Z8 1188 aa11.12□□□□□ -0.63
COX6A1-202ENST00000549525 DMRTA1Q5VZB9 504 aa11.12□□□□□ -0.63
COX6A1-202ENST00000549525 MAP3K7O43318 606 aa11.11□□□□□ -0.63
COX6A1-202ENST00000549525 PTPREP23469 700 aa11.11□□□□□ -0.63
COX6A1-202ENST00000549525 COL9A1P20849 921 aa11.1□□□□□ -0.63
COX6A1-202ENST00000549525 LSM11P83369 360 aaKnown RBP eCLIP11.09□□□□□ -0.63
COX6A1-202ENST00000549525 CDHR5Q9HBB8 845 aa11.09□□□□□ -0.63
COX6A1-202ENST00000549525 RBM26Q5T8P6 1007 aaKnown RBP11.08□□□□□ -0.64
COX6A1-202ENST00000549525 ERCC6Q03468 1493 aa11.07□□□□□ -0.64
COX6A1-202ENST00000549525 NESP48681 1621 aa11.06□□□□□ -0.64
COX6A1-202ENST00000549525 PPP1R3GB7ZBB8 358 aa11.06□□□□□ -0.64
COX6A1-202ENST00000549525 SMYD5Q6GMV2 418 aa11.05□□□□□ -0.64
COX6A1-202ENST00000549525 FANCD2Q9BXW9 1451 aa11.05□□□□□ -0.64
COX6A1-202ENST00000549525 ANKRD13DQ6ZTN6 518 aa11.04□□□□□ -0.64
COX6A1-202ENST00000549525 ZBED2Q9BTP6 218 aa11.04□□□□□ -0.64
COX6A1-202ENST00000549525 NPDC1Q9NQX5 325 aaPredicted RBP11.04□□□□□ -0.64
COX6A1-202ENST00000549525 KCNH8Q96L42 1107 aa11.03□□□□□ -0.64
COX6A1-202ENST00000549525 CEP164Q9UPV0 1460 aa11.03□□□□□ -0.64
COX6A1-202ENST00000549525 PRDM2Q13029 1718 aa11.01□□□□□ -0.65
COX6A1-202ENST00000549525 PROX2Q3B8N5 592 aa11.01□□□□□ -0.65
COX6A1-202ENST00000549525 ADGRD1Q6QNK2 874 aa11.01□□□□□ -0.65
COX6A1-202ENST00000549525 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.01□□□□□ -0.65
COX6A1-202ENST00000549525 SLC4A5Q9BY07 1137 aa11.01□□□□□ -0.65
COX6A1-202ENST00000549525 VPS9D1Q9Y2B5 631 aa11.01□□□□□ -0.65
COX6A1-202ENST00000549525 ABCC8Q09428 1581 aa11.01□□□□□ -0.65
COX6A1-202ENST00000549525 PTGDRQ13258 359 aa11□□□□□ -0.65
COX6A1-202ENST00000549525 NUTM2FA1L443 756 aa10.99□□□□□ -0.65
COX6A1-202ENST00000549525 TK2O00142 265 aa10.99□□□□□ -0.65
COX6A1-202ENST00000549525 GPR37O15354 613 aa10.99□□□□□ -0.65
COX6A1-202ENST00000549525 BCANQ96GW7 911 aa10.99□□□□□ -0.65
COX6A1-202ENST00000549525 HRO43593 1189 aa10.97□□□□□ -0.65
COX6A1-202ENST00000549525 LMOD2Q6P5Q4 547 aa10.96□□□□□ -0.65
COX6A1-202ENST00000549525 CERKQ8TCT0 537 aa10.96□□□□□ -0.65
COX6A1-202ENST00000549525 FAM198AQ9UFP1 575 aa10.96□□□□□ -0.65
COX6A1-202ENST00000549525 MRC2Q9UBG0 1479 aa10.95□□□□□ -0.66
COX6A1-202ENST00000549525 TULP1O00294 542 aaPredicted RBP10.95□□□□□ -0.66
COX6A1-202ENST00000549525 PRSS12P56730 875 aa10.95□□□□□ -0.66
COX6A1-202ENST00000549525 SPNS2Q8IVW8 549 aa10.95□□□□□ -0.66
COX6A1-202ENST00000549525 CDCA7LQ96GN5 454 aa10.95□□□□□ -0.66
COX6A1-202ENST00000549525 TSKSQ9UJT2 592 aa10.95□□□□□ -0.66
COX6A1-202ENST00000549525 TRIM6-TRIM34B2RNG4 842 aa10.94□□□□□ -0.66
COX6A1-202ENST00000549525 GPIHBP1Q8IV16 184 aa10.94□□□□□ -0.66
COX6A1-202ENST00000549525 FCHSD2O94868 740 aa10.93□□□□□ -0.66
COX6A1-202ENST00000549525 TTC13Q8NBP0 860 aa10.93□□□□□ -0.66
COX6A1-202ENST00000549525 KIF21AQ7Z4S6 1674 aa10.92□□□□□ -0.66
COX6A1-202ENST00000549525 BHMG1C9JSJ3 638 aaPredicted RBP10.92□□□□□ -0.66
COX6A1-202ENST00000549525 C3orf80F5H4A9 247 aa10.92□□□□□ -0.66
COX6A1-202ENST00000549525 PADI6Q6TGC4 694 aa10.92□□□□□ -0.66
COX6A1-202ENST00000549525 KIAA1468Q9P260 1216 aa10.92□□□□□ -0.66
COX6A1-202ENST00000549525 WRNQ14191 1432 aaPredicted RBP eCLIP10.92□□□□□ -0.66
COX6A1-202ENST00000549525 RBM27Q9P2N5 1060 aaKnown RBP10.91□□□□□ -0.66
COX6A1-202ENST00000549525 RABGEF1Q9UJ41 708 aa10.91□□□□□ -0.66
COX6A1-202ENST00000549525 ONECUT3O60422 494 aaPredicted RBP10.9□□□□□ -0.66
COX6A1-202ENST00000549525 FECHP22830 423 aa10.89□□□□□ -0.67
COX6A1-202ENST00000549525 HIC1Q14526 733 aa10.88□□□□□ -0.67
COX6A1-202ENST00000549525 DNMBPQ6XZF7 1577 aa10.88□□□□□ -0.67
COX6A1-202ENST00000549525 WDR62O43379 1518 aa10.88□□□□□ -0.67
COX6A1-202ENST00000549525 CUX2O14529 1486 aa10.87□□□□□ -0.67
COX6A1-202ENST00000549525 URB2Q14146 1524 aaKnown RBP10.86□□□□□ -0.67
COX6A1-202ENST00000549525 TOPBP1Q92547 1522 aa10.86□□□□□ -0.67
COX6A1-202ENST00000549525 GNPATO15228 680 aa10.86□□□□□ -0.67
COX6A1-202ENST00000549525 PACS2Q86VP3 889 aa10.85□□□□□ -0.67
COX6A1-202ENST00000549525 SEPT9Q9UHD8 586 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms