RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 ZBED2Q9BTP6 218 aa10.23□□□□□ -0.77
DEPDC4-205ENST00000548313 E2F4Q16254 413 aa10.22□□□□□ -0.77
DEPDC4-205ENST00000548313 WNT2BQ93097 391 aa10.22□□□□□ -0.77
DEPDC4-205ENST00000548313 ZDHHC16Q969W1 377 aa10.21□□□□□ -0.77
DEPDC4-205ENST00000548313 NBPF3Q9H094 633 aa10.21□□□□□ -0.77
DEPDC4-205ENST00000548313 EVI5O60447 810 aa10.2□□□□□ -0.78
DEPDC4-205ENST00000548313 CAMK2BQ13554 666 aa10.18□□□□□ -0.78
DEPDC4-205ENST00000548313 A0A0G2JS52 829 aa10.16□□□□□ -0.78
DEPDC4-205ENST00000548313 ADAM33Q9BZ11 813 aa10.16□□□□□ -0.78
DEPDC4-205ENST00000548313 MAP3K9P80192 1104 aa10.15□□□□□ -0.78
DEPDC4-205ENST00000548313 ARHGEF1Q92888 912 aaKnown RBP10.15□□□□□ -0.78
DEPDC4-205ENST00000548313 IRX2Q9BZI1 471 aaPredicted RBP10.15□□□□□ -0.78
DEPDC4-205ENST00000548313 KCNV2Q8TDN2 545 aa10.14□□□□□ -0.79
DEPDC4-205ENST00000548313 ARIH1Q9Y4X5 557 aaPredicted RBP10.14□□□□□ -0.79
DEPDC4-205ENST00000548313 BCANQ96GW7 911 aa10.13□□□□□ -0.79
DEPDC4-205ENST00000548313 PPP1R3GB7ZBB8 358 aa10.12□□□□□ -0.79
DEPDC4-205ENST00000548313 RABGEF1Q9UJ41 708 aa10.11□□□□□ -0.79
DEPDC4-205ENST00000548313 ANKK1Q8NFD2 765 aa10.1□□□□□ -0.79
DEPDC4-205ENST00000548313 NBR1Q14596 966 aa10.08□□□□□ -0.8
DEPDC4-205ENST00000548313 FBXW7Q969H0 707 aa10.08□□□□□ -0.8
DEPDC4-205ENST00000548313 EMILIN3Q9NT22 766 aa10.07□□□□□ -0.8
DEPDC4-205ENST00000548313 PCDHGA10Q9Y5H3 936 aa10.07□□□□□ -0.8
DEPDC4-205ENST00000548313 TYW1BQ6NUM6 668 aa10.06□□□□□ -0.8
DEPDC4-205ENST00000548313 LAPTM4BQ86VI4 370 aa10.06□□□□□ -0.8
DEPDC4-205ENST00000548313 ITGBL1O95965 494 aaPredicted RBP10.05□□□□□ -0.8
DEPDC4-205ENST00000548313 NYAP1Q6ZVC0 841 aa10.05□□□□□ -0.8
DEPDC4-205ENST00000548313 PHF14O94880 888 aa10.04□□□□□ -0.8
DEPDC4-205ENST00000548313 PROX2Q3B8N5 592 aa10.04□□□□□ -0.8
DEPDC4-205ENST00000548313 SPDYE16A6NNV3 312 aaPredicted RBP10.03□□□□□ -0.8
DEPDC4-205ENST00000548313 ONECUT3O60422 494 aaPredicted RBP10.03□□□□□ -0.8
DEPDC4-205ENST00000548313 DPYSL4O14531 572 aa10.02□□□□□ -0.81
DEPDC4-205ENST00000548313 COL9A1P20849 921 aa10.02□□□□□ -0.81
DEPDC4-205ENST00000548313 SOWAHBA6NEL2 793 aa10.01□□□□□ -0.81
DEPDC4-205ENST00000548313 BCAMP50895 628 aa10□□□□□ -0.81
DEPDC4-205ENST00000548313 KIAA1468Q9P260 1216 aa10□□□□□ -0.81
DEPDC4-205ENST00000548313 PDIA6Q15084 440 aa9.99□□□□□ -0.81
DEPDC4-205ENST00000548313 ZFRQ96KR1 1074 aaKnown RBP9.99□□□□□ -0.81
DEPDC4-205ENST00000548313 EPAS1Q99814 870 aa9.99□□□□□ -0.81
DEPDC4-205ENST00000548313 KCNC4Q03721 635 aa9.96□□□□□ -0.82
DEPDC4-205ENST00000548313 C6orf132Q5T0Z8 1188 aa9.96□□□□□ -0.82
DEPDC4-205ENST00000548313 TESPA1A2RU30 521 aaPredicted RBP9.94□□□□□ -0.82
DEPDC4-205ENST00000548313 SEMA3EO15041 775 aa9.94□□□□□ -0.82
DEPDC4-205ENST00000548313 SMYD5Q6GMV2 418 aa9.94□□□□□ -0.82
DEPDC4-205ENST00000548313 WBP1LQ9NX94 342 aa9.94□□□□□ -0.82
DEPDC4-205ENST00000548313 TRIM6-TRIM34B2RNG4 842 aa9.93□□□□□ -0.82
DEPDC4-205ENST00000548313 TULP1O00294 542 aaPredicted RBP9.93□□□□□ -0.82
DEPDC4-205ENST00000548313 FAM98CQ17RN3 349 aaKnown RBP9.93□□□□□ -0.82
DEPDC4-205ENST00000548313 Q6ZNB5 142 aa9.91□□□□□ -0.82
DEPDC4-205ENST00000548313 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.91□□□□□ -0.82
DEPDC4-205ENST00000548313 SEPT9Q9UHD8 586 aaPredicted RBP9.91□□□□□ -0.82
DEPDC4-205ENST00000548313 TSR3Q9UJK0 312 aaKnown RBP9.91□□□□□ -0.82
DEPDC4-205ENST00000548313 LRCH3Q96II8 777 aa9.9□□□□□ -0.82
DEPDC4-205ENST00000548313 LAPTM4AQ15012 233 aa9.88□□□□□ -0.83
DEPDC4-205ENST00000548313 HPS5Q9UPZ3 1129 aa9.88□□□□□ -0.83
DEPDC4-205ENST00000548313 PACS2Q86VP3 889 aa9.87□□□□□ -0.83
DEPDC4-205ENST00000548313 RBM33Q96EV2 1170 aaKnown RBP9.87□□□□□ -0.83
DEPDC4-205ENST00000548313 MLLT3P42568 568 aaPredicted RBP9.85□□□□□ -0.83
DEPDC4-205ENST00000548313 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.85□□□□□ -0.83
DEPDC4-205ENST00000548313 DDX12PQ92771 950 aa9.84□□□□□ -0.83
DEPDC4-205ENST00000548313 GRXCR2A6NFK2 248 aa9.83□□□□□ -0.84
DEPDC4-205ENST00000548313 PPP4CP60510 307 aa9.82□□□□□ -0.84
DEPDC4-205ENST00000548313 MAP3K7O43318 606 aa9.81□□□□□ -0.84
DEPDC4-205ENST00000548313 EN1Q05925 392 aaPredicted RBP9.81□□□□□ -0.84
DEPDC4-205ENST00000548313 LMOD2Q6P5Q4 547 aa9.8□□□□□ -0.84
DEPDC4-205ENST00000548313 OSBPP22059 807 aa9.79□□□□□ -0.84
DEPDC4-205ENST00000548313 TSKSQ9UJT2 592 aa9.79□□□□□ -0.84
DEPDC4-205ENST00000548313 GFRA3O60609 400 aa9.77□□□□□ -0.85
DEPDC4-205ENST00000548313 TSR1Q2NL82 804 aaKnown RBP9.77□□□□□ -0.85
DEPDC4-205ENST00000548313 CERKQ8TCT0 537 aa9.77□□□□□ -0.85
DEPDC4-205ENST00000548313 TJAP1Q5JTD0 557 aa9.76□□□□□ -0.85
DEPDC4-205ENST00000548313 RBM26Q5T8P6 1007 aaKnown RBP9.75□□□□□ -0.85
DEPDC4-205ENST00000548313 TRAF7Q6Q0C0 670 aa9.75□□□□□ -0.85
DEPDC4-205ENST00000548313 CDCA7LQ96GN5 454 aa9.75□□□□□ -0.85
DEPDC4-205ENST00000548313 PRSS12P56730 875 aa9.74□□□□□ -0.85
DEPDC4-205ENST00000548313 SAMD7Q7Z3H4 446 aa9.74□□□□□ -0.85
DEPDC4-205ENST00000548313 IL21Q9HBE4 155 aa9.73□□□□□ -0.85
DEPDC4-205ENST00000548313 PRKD2Q9BZL6 878 aa9.72□□□□□ -0.85
DEPDC4-205ENST00000548313 NBPF26B4DH59 902 aa9.71□□□□□ -0.86
DEPDC4-205ENST00000548313 HDGFP51858 240 aaKnown RBP9.71□□□□□ -0.86
DEPDC4-205ENST00000548313 TATDN2Q93075 761 aa9.71□□□□□ -0.86
DEPDC4-205ENST00000548313 MTRQ99707 1265 aa9.71□□□□□ -0.86
DEPDC4-205ENST00000548313 V9GY48 417 aaPredicted RBP9.71□□□□□ -0.86
DEPDC4-205ENST00000548313 NUTM2FA1L443 756 aa9.7□□□□□ -0.86
DEPDC4-205ENST00000548313 SMAPO00193 183 aa9.7□□□□□ -0.86
DEPDC4-205ENST00000548313 NRG2O14511 850 aaPredicted RBP9.7□□□□□ -0.86
DEPDC4-205ENST00000548313 PRIM1P49642 420 aaKnown RBP9.7□□□□□ -0.86
DEPDC4-205ENST00000548313 GPIHBP1Q8IV16 184 aa9.7□□□□□ -0.86
DEPDC4-205ENST00000548313 PPP1R18Q6NYC8 613 aa9.69□□□□□ -0.86
DEPDC4-205ENST00000548313 TPRNQ4KMQ1 711 aa9.68□□□□□ -0.86
DEPDC4-205ENST00000548313 ZC3H15Q8WU90 426 aaKnown RBP9.68□□□□□ -0.86
DEPDC4-205ENST00000548313 PNMA3Q9UL41 463 aa9.68□□□□□ -0.86
DEPDC4-205ENST00000548313 NECTIN2Q92692 538 aa9.67□□□□□ -0.86
DEPDC4-205ENST00000548313 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.67□□□□□ -0.86
DEPDC4-205ENST00000548313 FAM198AQ9UFP1 575 aa9.67□□□□□ -0.86
DEPDC4-205ENST00000548313 LCE2BO14633 110 aa9.66□□□□□ -0.86
DEPDC4-205ENST00000548313 FCHSD2O94868 740 aa9.66□□□□□ -0.86
DEPDC4-205ENST00000548313 PTGDRQ13258 359 aa9.65□□□□□ -0.86
DEPDC4-205ENST00000548313 RBM27Q9P2N5 1060 aaKnown RBP9.65□□□□□ -0.86
DEPDC4-205ENST00000548313 HIC1Q14526 733 aa9.64□□□□□ -0.87
DEPDC4-205ENST00000548313 RNF40O75150 1001 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms