RNA–Protein interactions for RNA: ENST00000548251.5

LETMD1-214, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-214ENST00000548251 CDK11AQ9UQ88 783 aaPredicted RBP12.63□□□□□ -0.39
LETMD1-214ENST00000548251 FMN1Q68DA7 1419 aa12.62□□□□□ -0.39
LETMD1-214ENST00000548251 CDC42BPBQ9Y5S2 1711 aa12.62□□□□□ -0.39
LETMD1-214ENST00000548251 SPAG9O60271 1321 aaKnown RBP12.62□□□□□ -0.39
LETMD1-214ENST00000548251 HNRNPMP52272 730 aaKnown RBP eCLIP12.61□□□□□ -0.39
LETMD1-214ENST00000548251 ZRANB1Q9UGI0 708 aa12.61□□□□□ -0.39
LETMD1-214ENST00000548251 CASKIN1Q8WXD9 1431 aa12.6□□□□□ -0.39
LETMD1-214ENST00000548251 XIRP1Q702N8 1843 aaKnown RBP12.6□□□□□ -0.39
LETMD1-214ENST00000548251 DEPDC5O75140 1603 aa12.59□□□□□ -0.39
LETMD1-214ENST00000548251 JCADQ9P266 1359 aa12.59□□□□□ -0.39
LETMD1-214ENST00000548251 IQGAP1P46940 1657 aa12.59□□□□□ -0.39
LETMD1-214ENST00000548251 MEX3CQ5U5Q3 659 aaKnown RBP12.59□□□□□ -0.39
LETMD1-214ENST00000548251 RBM33Q96EV2 1170 aaKnown RBP12.59□□□□□ -0.39
LETMD1-214ENST00000548251 SETBP1Q9Y6X0 1596 aa12.59□□□□□ -0.39
LETMD1-214ENST00000548251 ITSN2Q9NZM3 1697 aa12.58□□□□□ -0.4
LETMD1-214ENST00000548251 SYNMO15061 1565 aa12.58□□□□□ -0.4
LETMD1-214ENST00000548251 SAMD9LQ8IVG5 1584 aa12.58□□□□□ -0.4
LETMD1-214ENST00000548251 ZNF777Q9ULD5 760 aaPredicted RBP12.58□□□□□ -0.4
LETMD1-214ENST00000548251 TROQ12816 1431 aaPredicted RBP12.57□□□□□ -0.4
LETMD1-214ENST00000548251 LRP6O75581 1613 aa12.57□□□□□ -0.4
LETMD1-214ENST00000548251 A2MP01023 1474 aa12.57□□□□□ -0.4
LETMD1-214ENST00000548251 ROBO1Q9Y6N7 1651 aa12.57□□□□□ -0.4
LETMD1-214ENST00000548251 CDC42BPAQ5VT25 1732 aa12.57□□□□□ -0.4
LETMD1-214ENST00000548251 MIA2Q96PC5 1412 aa12.56□□□□□ -0.4
LETMD1-214ENST00000548251 FYCO1Q9BQS8 1478 aa12.56□□□□□ -0.4
LETMD1-214ENST00000548251 FAM135AQ9P2D6 1515 aa12.56□□□□□ -0.4
LETMD1-214ENST00000548251 UGGT1Q9NYU2 1555 aa12.56□□□□□ -0.4
LETMD1-214ENST00000548251 NUTM2BA6NNL0 878 aaPredicted RBP12.54□□□□□ -0.4
LETMD1-214ENST00000548251 NUTM2EB1AL46 878 aaPredicted RBP12.54□□□□□ -0.4
LETMD1-214ENST00000548251 NUTM2DQ5VT03 806 aaPredicted RBP12.54□□□□□ -0.4
LETMD1-214ENST00000548251 NUTM2AQ8IVF1 878 aaPredicted RBP12.54□□□□□ -0.4
LETMD1-214ENST00000548251 PLXNC1O60486 1568 aa12.54□□□□□ -0.4
LETMD1-214ENST00000548251 TMEM94Q12767 1356 aa12.54□□□□□ -0.4
LETMD1-214ENST00000548251 LTKP29376 864 aa12.53□□□□□ -0.4
LETMD1-214ENST00000548251 SLAIN2Q9P270 581 aa12.53□□□□□ -0.4
LETMD1-214ENST00000548251 CDK12Q9NYV4 1490 aaPredicted RBP12.53□□□□□ -0.4
LETMD1-214ENST00000548251 SPATA31A6Q5VVP1 1343 aa12.52□□□□□ -0.41
LETMD1-214ENST00000548251 PREX2Q70Z35 1606 aa12.51□□□□□ -0.41
LETMD1-214ENST00000548251 PROSER2Q86WR7 435 aaPredicted RBP12.5□□□□□ -0.41
LETMD1-214ENST00000548251 PZPP20742 1482 aa12.5□□□□□ -0.41
LETMD1-214ENST00000548251 CCDC18Q5T9S5 1454 aa12.5□□□□□ -0.41
LETMD1-214ENST00000548251 NLRP1Q9C000 1473 aa12.5□□□□□ -0.41
LETMD1-214ENST00000548251 ZC3H13Q5T200 1668 aaKnown RBP12.5□□□□□ -0.41
LETMD1-214ENST00000548251 PHLPP1O60346 1717 aa12.49□□□□□ -0.41
LETMD1-214ENST00000548251 ATP7AQ04656 1500 aa12.49□□□□□ -0.41
LETMD1-214ENST00000548251 WASHC2CQ9Y4E1 1318 aa12.49□□□□□ -0.41
LETMD1-214ENST00000548251 TXNDC2Q86VQ3 553 aa12.49□□□□□ -0.41
LETMD1-214ENST00000548251 KDM5DQ9BY66 1539 aa12.48□□□□□ -0.41
LETMD1-214ENST00000548251 RGS12O14924 1447 aa12.48□□□□□ -0.41
LETMD1-214ENST00000548251 AFF2P51816 1311 aa12.48□□□□□ -0.41
LETMD1-214ENST00000548251 KIF3BO15066 747 aa12.48□□□□□ -0.41
LETMD1-214ENST00000548251 FOXD1Q16676 465 aa12.48□□□□□ -0.41
LETMD1-214ENST00000548251 QTRT2Q9H974 415 aaKnown RBP12.48□□□□□ -0.41
LETMD1-214ENST00000548251 IFFO2Q5TF58 517 aa12.47□□□□□ -0.41
LETMD1-214ENST00000548251 SYCP2Q9BX26 1530 aa12.47□□□□□ -0.41
LETMD1-214ENST00000548251 RBM6P78332 1123 aaKnown RBP12.46□□□□□ -0.41
LETMD1-214ENST00000548251 TIAM1Q13009 1591 aa12.45□□□□□ -0.42
LETMD1-214ENST00000548251 KCNA6P17658 529 aa12.45□□□□□ -0.42
LETMD1-214ENST00000548251 VPS8Q8N3P4 1428 aa12.45□□□□□ -0.42
LETMD1-214ENST00000548251 SCAF11Q99590 1463 aaKnown RBP12.43□□□□□ -0.42
LETMD1-214ENST00000548251 COL16A1Q07092 1604 aaPredicted RBP12.43□□□□□ -0.42
LETMD1-214ENST00000548251 INO80Q9ULG1 1556 aaPredicted RBP12.43□□□□□ -0.42
LETMD1-214ENST00000548251 DHX29Q7Z478 1369 aaKnown RBP12.43□□□□□ -0.42
LETMD1-214ENST00000548251 MAP3K1Q13233 1512 aa12.42□□□□□ -0.42
LETMD1-214ENST00000548251 FGD6Q6ZV73 1430 aa12.42□□□□□ -0.42
LETMD1-214ENST00000548251 EHBP1L1Q8N3D4 1523 aa12.42□□□□□ -0.42
LETMD1-214ENST00000548251 GPATCH8Q9UKJ3 1502 aaKnown RBP12.42□□□□□ -0.42
LETMD1-214ENST00000548251 LRRC9Q6ZRR7 1453 aa12.41□□□□□ -0.42
LETMD1-214ENST00000548251 ATAD2Q6PL18 1390 aa12.41□□□□□ -0.42
LETMD1-214ENST00000548251 KANK4Q5T7N3 995 aaPredicted RBP12.4□□□□□ -0.42
LETMD1-214ENST00000548251 SLC26A8Q96RN1 970 aa12.4□□□□□ -0.42
LETMD1-214ENST00000548251 KIAA1107Q9UPP5 1409 aa12.39□□□□□ -0.43
LETMD1-214ENST00000548251 MSH6P52701 1360 aa12.39□□□□□ -0.43
LETMD1-214ENST00000548251 MTUS2Q5JR59 1369 aa12.39□□□□□ -0.43
LETMD1-214ENST00000548251 ZNF644Q9H582 1327 aaPredicted RBP12.38□□□□□ -0.43
LETMD1-214ENST00000548251 CFDP1Q9UEE9 299 aaPredicted RBP12.38□□□□□ -0.43
LETMD1-214ENST00000548251 EID1Q9Y6B2 187 aa12.38□□□□□ -0.43
LETMD1-214ENST00000548251 NCOA2Q15596 1464 aa12.38□□□□□ -0.43
LETMD1-214ENST00000548251 ADGBQ8N7X0 1667 aa12.38□□□□□ -0.43
LETMD1-214ENST00000548251 C8orf37Q96NL8 207 aa12.37□□□□□ -0.43
LETMD1-214ENST00000548251 ARHGAP23Q9P227 1491 aa12.36□□□□□ -0.43
LETMD1-214ENST00000548251 YY1P25490 414 aa12.35□□□□□ -0.43
LETMD1-214ENST00000548251 CCDC125Q86Z20 511 aa12.35□□□□□ -0.43
LETMD1-214ENST00000548251 NGLY1Q96IV0 654 aa12.35□□□□□ -0.43
LETMD1-214ENST00000548251 PRDM15P57071 1507 aaPredicted RBP12.35□□□□□ -0.43
LETMD1-214ENST00000548251 EP400Q96L91 3159 aa12.34□□□□□ -0.43
LETMD1-214ENST00000548251 UBR1Q8IWV7 1749 aa12.34□□□□□ -0.43
LETMD1-214ENST00000548251 CFAP65Q6ZU64 1925 aaKnown RBP12.33□□□□□ -0.44
LETMD1-214ENST00000548251 SLIT1O75093 1534 aa12.33□□□□□ -0.44
LETMD1-214ENST00000548251 SHPRHQ149N8 1683 aa12.33□□□□□ -0.44
LETMD1-214ENST00000548251 CCNB3Q8WWL7 1395 aa12.32□□□□□ -0.44
LETMD1-214ENST00000548251 PLEKHH2Q8IVE3 1493 aa12.32□□□□□ -0.44
LETMD1-214ENST00000548251 DEFB132Q7Z7B7 95 aa12.31□□□□□ -0.44
LETMD1-214ENST00000548251 ERVK-7P63135 1459 aa12.31□□□□□ -0.44
LETMD1-214ENST00000548251 RTEL1-TNFRSF6BF6WH68 1400 aa12.3□□□□□ -0.44
LETMD1-214ENST00000548251 CAMSAP2Q08AD1 1489 aa12.29□□□□□ -0.44
LETMD1-214ENST00000548251 MBD5Q9P267 1494 aa12.29□□□□□ -0.44
LETMD1-214ENST00000548251 PSDA5PKW4 1024 aaPredicted RBP12.29□□□□□ -0.44
LETMD1-214ENST00000548251 BRINP3Q76B58 766 aa12.29□□□□□ -0.44
LETMD1-214ENST00000548251 LRP5O75197 1615 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms