RNA–Protein interactions for RNA: ENST00000548251.5

LETMD1-214, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-214ENST00000548251 NISCHQ9Y2I1 1504 aa19.46■□□□□ 0.71
LETMD1-214ENST00000548251 ABCC9O60706 1549 aa18.81■□□□□ 0.6
LETMD1-214ENST00000548251 DNAJC5BQ9UF47 199 aa18.64■□□□□ 0.57
LETMD1-214ENST00000548251 CCDC180Q9P1Z9 1646 aa17.7■□□□□ 0.42
LETMD1-214ENST00000548251 DNAJC5Q9H3Z4 198 aa17.7■□□□□ 0.42
LETMD1-214ENST00000548251 PABPN1Q86U42 306 aaKnown RBP eCLIP17.49■□□□□ 0.39
LETMD1-214ENST00000548251 RB1CC1Q8TDY2 1594 aa17.36■□□□□ 0.37
LETMD1-214ENST00000548251 DCAF8L2P0C7V8 631 aa17.03■□□□□ 0.32
LETMD1-214ENST00000548251 NACADO15069 1562 aa17.02■□□□□ 0.32
LETMD1-214ENST00000548251 CECR2Q9BXF3 1484 aa17■□□□□ 0.31
LETMD1-214ENST00000548251 UNC13AQ9UPW8 1703 aa16.98■□□□□ 0.31
LETMD1-214ENST00000548251 BICRAQ9NZM4 1560 aa16.98■□□□□ 0.31
LETMD1-214ENST00000548251 CC2D2AQ9P2K1 1620 aa16.88■□□□□ 0.29
LETMD1-214ENST00000548251 EIF4G1Q04637 1599 aaKnown RBP16.6■□□□□ 0.25
LETMD1-214ENST00000548251 TRIM41Q8WV44 630 aa16.56■□□□□ 0.24
LETMD1-214ENST00000548251 CUX2O14529 1486 aa16.48■□□□□ 0.23
LETMD1-214ENST00000548251 SHROOM4Q9ULL8 1493 aa16.48■□□□□ 0.23
LETMD1-214ENST00000548251 MYO15BQ96JP2 1530 aa16.46■□□□□ 0.23
LETMD1-214ENST00000548251 ERCC6Q03468 1493 aa16.24■□□□□ 0.19
LETMD1-214ENST00000548251 SCRIBQ14160 1630 aa16.22■□□□□ 0.19
LETMD1-214ENST00000548251 ZCCHC6Q5VYS8 1495 aaKnown RBP15.95■□□□□ 0.14
LETMD1-214ENST00000548251 NESP48681 1621 aa15.93■□□□□ 0.14
LETMD1-214ENST00000548251 DCAF1Q9Y4B6 1507 aa15.93■□□□□ 0.14
LETMD1-214ENST00000548251 NCAPD3P42695 1498 aa15.81■□□□□ 0.12
LETMD1-214ENST00000548251 THOC2Q8NI27 1593 aaKnown RBP15.79■□□□□ 0.12
LETMD1-214ENST00000548251 AEBP2Q6ZN18 517 aaPredicted RBP15.76■□□□□ 0.11
LETMD1-214ENST00000548251 OSCARQ8IYS5 282 aa15.73■□□□□ 0.11
LETMD1-214ENST00000548251 SMARCA2P51531 1590 aa15.67■□□□□ 0.1
LETMD1-214ENST00000548251 ATAD2BQ9ULI0 1458 aa15.64■□□□□ 0.09
LETMD1-214ENST00000548251 TRHP20396 242 aaPredicted RBP15.57■□□□□ 0.08
LETMD1-214ENST00000548251 BAZ1AQ9NRL2 1556 aaPredicted RBP15.56■□□□□ 0.08
LETMD1-214ENST00000548251 KIF21AQ7Z4S6 1674 aa15.56■□□□□ 0.08
LETMD1-214ENST00000548251 PDS5BQ9NTI5 1447 aa15.51■□□□□ 0.07
LETMD1-214ENST00000548251 LAMC3Q9Y6N6 1575 aa15.51■□□□□ 0.07
LETMD1-214ENST00000548251 RIMBP3CA6NJZ7 1639 aa15.5■□□□□ 0.07
LETMD1-214ENST00000548251 RIMBP3BA6NNM3 1639 aa15.5■□□□□ 0.07
LETMD1-214ENST00000548251 RIMBP3Q9UFD9 1639 aa15.5■□□□□ 0.07
LETMD1-214ENST00000548251 HMGXB3Q12766 1538 aa15.5■□□□□ 0.07
LETMD1-214ENST00000548251 CYB5RLQ6IPT4 315 aa15.47■□□□□ 0.07
LETMD1-214ENST00000548251 MRC2Q9UBG0 1479 aa15.42■□□□□ 0.06
LETMD1-214ENST00000548251 BAZ1BQ9UIG0 1483 aaKnown RBP15.4■□□□□ 0.06
LETMD1-214ENST00000548251 WDR62O43379 1518 aa15.38■□□□□ 0.05
LETMD1-214ENST00000548251 ARHGEF11O15085 1522 aa15.38■□□□□ 0.05
LETMD1-214ENST00000548251 SMARCA4P51532 1647 aa15.32■□□□□ 0.04
LETMD1-214ENST00000548251 CADPSQ9ULU8 1353 aa15.32■□□□□ 0.04
LETMD1-214ENST00000548251 ILDR1Q86SU0 546 aaPredicted RBP15.31■□□□□ 0.04
LETMD1-214ENST00000548251 ARAP1Q96P48 1450 aa15.19■□□□□ 0.02
LETMD1-214ENST00000548251 CEP164Q9UPV0 1460 aa15.16■□□□□ 0.02
LETMD1-214ENST00000548251 PEG3Q9GZU2 1588 aa15.15■□□□□ 0.02
LETMD1-214ENST00000548251 FANCD2Q9BXW9 1451 aa15.11■□□□□ 0.01
LETMD1-214ENST00000548251 URB2Q14146 1524 aaKnown RBP15.07■□□□□ 0
LETMD1-214ENST00000548251 ZNF608Q9ULD9 1512 aaPredicted RBP15.07■□□□□ 0
LETMD1-214ENST00000548251 MROH2BQ7Z745 1585 aa15.03■□□□□ -0
LETMD1-214ENST00000548251 FBLN2P98095 1184 aa14.97□□□□□ -0.01
LETMD1-214ENST00000548251 RSF1Q96T23 1441 aaPredicted RBP14.95□□□□□ -0.02
LETMD1-214ENST00000548251 CFTRP13569 1480 aa14.91□□□□□ -0.02
LETMD1-214ENST00000548251 IFT140Q96RY7 1462 aa14.91□□□□□ -0.02
LETMD1-214ENST00000548251 CHD1O14646 1710 aa14.88□□□□□ -0.03
LETMD1-214ENST00000548251 AQRO60306 1485 aaKnown RBP eCLIP14.84□□□□□ -0.039e-11■□□□□ 10.1
LETMD1-214ENST00000548251 KDM4FA0A1W2PPD8 638 aa14.83□□□□□ -0.04
LETMD1-214ENST00000548251 EIF4G3O43432 1585 aaKnown RBP14.81□□□□□ -0.04
LETMD1-214ENST00000548251 WIZO95785 1651 aa14.77□□□□□ -0.04
LETMD1-214ENST00000548251 TOPBP1Q92547 1522 aa14.71□□□□□ -0.05
LETMD1-214ENST00000548251 CLASP1Q7Z460 1538 aa14.7□□□□□ -0.06
LETMD1-214ENST00000548251 GAPVD1Q14C86 1478 aa14.68□□□□□ -0.06
LETMD1-214ENST00000548251 CHMP7Q8WUX9 453 aaPredicted RBP14.67□□□□□ -0.06
LETMD1-214ENST00000548251 TARBP1Q13395 1621 aaKnown RBP14.63□□□□□ -0.07
LETMD1-214ENST00000548251 TDRD9Q8NDG6 1382 aaKnown RBP14.63□□□□□ -0.07
LETMD1-214ENST00000548251 SNAPC4Q5SXM2 1469 aa14.57□□□□□ -0.08
LETMD1-214ENST00000548251 SYNJ1O43426 1573 aa14.57□□□□□ -0.08
LETMD1-214ENST00000548251 ABCC8Q09428 1581 aa14.56□□□□□ -0.08
LETMD1-214ENST00000548251 RAD54L2Q9Y4B4 1467 aa14.55□□□□□ -0.08
LETMD1-214ENST00000548251 FBXO41Q8TF61 875 aa14.54□□□□□ -0.08
LETMD1-214ENST00000548251 KIF13AQ9H1H9 1805 aa14.54□□□□□ -0.08
LETMD1-214ENST00000548251 DNMBPQ6XZF7 1577 aa14.52□□□□□ -0.08
LETMD1-214ENST00000548251 POLA1P09884 1462 aaPredicted RBP14.51□□□□□ -0.09
LETMD1-214ENST00000548251 FAM69CQ0P6D2 419 aa14.51□□□□□ -0.09
LETMD1-214ENST00000548251 PRDM2Q13029 1718 aa14.51□□□□□ -0.09
LETMD1-214ENST00000548251 ERCC6L2Q5T890 1561 aa14.51□□□□□ -0.09
LETMD1-214ENST00000548251 SOGA1O94964 1423 aa14.49□□□□□ -0.09
LETMD1-214ENST00000548251 TOP2AP11388 1531 aaKnown RBP14.46□□□□□ -0.1
LETMD1-214ENST00000548251 SYNJ2O15056 1496 aa14.44□□□□□ -0.1
LETMD1-214ENST00000548251 MAGI1Q96QZ7 1491 aaPredicted RBP14.44□□□□□ -0.1
LETMD1-214ENST00000548251 HECW2Q9P2P5 1572 aa14.43□□□□□ -0.1
LETMD1-214ENST00000548251 CCDC88BA6NC98 1476 aa14.41□□□□□ -0.1
LETMD1-214ENST00000548251 GRIN2BQ13224 1484 aa14.39□□□□□ -0.11
LETMD1-214ENST00000548251 LMTK3Q96Q04 1460 aa14.39□□□□□ -0.11
LETMD1-214ENST00000548251 ABCC10Q5T3U5 1492 aa14.38□□□□□ -0.11
LETMD1-214ENST00000548251 ILDR2Q71H61 639 aa14.37□□□□□ -0.11
LETMD1-214ENST00000548251 KDM6BO15054 1643 aa14.37□□□□□ -0.11
LETMD1-214ENST00000548251 SOCS7O14512 581 aa14.35□□□□□ -0.11
LETMD1-214ENST00000548251 ADGRL1O94910 1474 aa14.35□□□□□ -0.11
LETMD1-214ENST00000548251 CEP170Q5SW79 1584 aa14.32□□□□□ -0.12
LETMD1-214ENST00000548251 FGD5Q6ZNL6 1462 aa14.29□□□□□ -0.12
LETMD1-214ENST00000548251 WDR97A6NE52 1622 aa14.28□□□□□ -0.12
LETMD1-214ENST00000548251 NPM1P06748 294 aaKnown RBP eCLIP14.28□□□□□ -0.12
LETMD1-214ENST00000548251 TSPOAP1O95153 1857 aa14.26□□□□□ -0.13
LETMD1-214ENST00000548251 DIP2BQ9P265 1576 aa14.26□□□□□ -0.13
LETMD1-214ENST00000548251 GRIN2AQ12879 1464 aa14.2□□□□□ -0.14
LETMD1-214ENST00000548251 NUP160Q12769 1436 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms