RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 ABCA6Q8N139 1617 aa17.98■□□□□ 0.47
RAB5B-204ENST00000548068 DNAJC5Q9H3Z4 198 aa17.97■□□□□ 0.47
RAB5B-204ENST00000548068 BCORL1Q5H9F3 1711 aa17.97■□□□□ 0.47
RAB5B-204ENST00000548068 A2MP01023 1474 aa17.96■□□□□ 0.47
RAB5B-204ENST00000548068 DIP2CQ9Y2E4 1556 aa17.95■□□□□ 0.46
RAB5B-204ENST00000548068 RNF17Q9BXT8 1623 aaKnown RBP17.94■□□□□ 0.46
RAB5B-204ENST00000548068 PRDM15P57071 1507 aaPredicted RBP17.93■□□□□ 0.46
RAB5B-204ENST00000548068 KANK1Q14678 1352 aa17.92■□□□□ 0.46
RAB5B-204ENST00000548068 ANKRD30BQ9BXX2 1392 aa17.92■□□□□ 0.46
RAB5B-204ENST00000548068 TONSLQ96HA7 1378 aa17.91■□□□□ 0.46
RAB5B-204ENST00000548068 RAPGEF3O95398 923 aa17.91■□□□□ 0.46
RAB5B-204ENST00000548068 NEUROD1Q13562 356 aa17.91■□□□□ 0.46
RAB5B-204ENST00000548068 PKD2Q13563 968 aa17.91■□□□□ 0.46
RAB5B-204ENST00000548068 SIN3AQ96ST3 1273 aa17.91■□□□□ 0.46
RAB5B-204ENST00000548068 VWDEQ8N2E2 1590 aa17.9■□□□□ 0.46
RAB5B-204ENST00000548068 TET3O43151 1660 aa17.9■□□□□ 0.46
RAB5B-204ENST00000548068 RPRD2Q5VT52 1461 aaKnown RBP17.88■□□□□ 0.45
RAB5B-204ENST00000548068 REREQ9P2R6 1566 aa17.87■□□□□ 0.45
RAB5B-204ENST00000548068 MROH1Q8NDA8 1641 aa17.87■□□□□ 0.45
RAB5B-204ENST00000548068 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.87■□□□□ 0.45
RAB5B-204ENST00000548068 KIF3BO15066 747 aa17.86■□□□□ 0.45
RAB5B-204ENST00000548068 FOXD1Q16676 465 aa17.85■□□□□ 0.45
RAB5B-204ENST00000548068 ARHGEF40Q8TER5 1519 aa17.84■□□□□ 0.45
RAB5B-204ENST00000548068 LMTK2Q8IWU2 1503 aa17.83■□□□□ 0.45
RAB5B-204ENST00000548068 ATP10AO60312 1499 aa17.83■□□□□ 0.45
RAB5B-204ENST00000548068 E9PCH4 1651 aa17.83■□□□□ 0.44
RAB5B-204ENST00000548068 ZC3H13Q5T200 1668 aaKnown RBP17.83■□□□□ 0.44
RAB5B-204ENST00000548068 YEATS2Q9ULM3 1422 aa17.82■□□□□ 0.44
RAB5B-204ENST00000548068 CEP152O94986 1710 aa17.81■□□□□ 0.44
RAB5B-204ENST00000548068 EFCAB6Q5THR3 1501 aa17.8■□□□□ 0.44
RAB5B-204ENST00000548068 SPHKAPQ2M3C7 1700 aa17.8■□□□□ 0.44
RAB5B-204ENST00000548068 AGLP35573 1532 aa17.79■□□□□ 0.44
RAB5B-204ENST00000548068 CCDC144AA2RUR9 1427 aa17.78■□□□□ 0.44
RAB5B-204ENST00000548068 PPP1R15AO75807 674 aaPredicted RBP17.77■□□□□ 0.44
RAB5B-204ENST00000548068 TRHP20396 242 aaPredicted RBP17.77■□□□□ 0.44
RAB5B-204ENST00000548068 TRPM2O94759 1503 aa17.77■□□□□ 0.43
RAB5B-204ENST00000548068 COL17A1Q9UMD9 1497 aaPredicted RBP17.76■□□□□ 0.43
RAB5B-204ENST00000548068 ABCC3O15438 1527 aa17.75■□□□□ 0.43
RAB5B-204ENST00000548068 CAMSAP1Q5T5Y3 1602 aa17.75■□□□□ 0.43
RAB5B-204ENST00000548068 PTPRTO14522 1441 aa17.72■□□□□ 0.43
RAB5B-204ENST00000548068 PLA2R1Q13018 1463 aa17.72■□□□□ 0.43
RAB5B-204ENST00000548068 GGT6Q6P531 493 aa17.71■□□□□ 0.43
RAB5B-204ENST00000548068 ZNF316A6NFI3 1004 aaPredicted RBP17.7■□□□□ 0.42
RAB5B-204ENST00000548068 L3MBTL2Q969R5 705 aa17.7■□□□□ 0.42
RAB5B-204ENST00000548068 PPP6R1Q9UPN7 881 aa17.69■□□□□ 0.42
RAB5B-204ENST00000548068 WASHC2CQ9Y4E1 1318 aa17.69■□□□□ 0.42
RAB5B-204ENST00000548068 NEURL4Q96JN8 1562 aa17.68■□□□□ 0.42
RAB5B-204ENST00000548068 ARHGAP31Q2M1Z3 1444 aa17.67■□□□□ 0.42
RAB5B-204ENST00000548068 CLTCL1P53675 1640 aa17.67■□□□□ 0.42
RAB5B-204ENST00000548068 KIF1BO60333 1816 aa17.65■□□□□ 0.42
RAB5B-204ENST00000548068 CNTLNQ9NXG0 1405 aa17.65■□□□□ 0.42
RAB5B-204ENST00000548068 NPATQ14207 1427 aa17.64■□□□□ 0.42
RAB5B-204ENST00000548068 SIGLEC1Q9BZZ2 1709 aa17.64■□□□□ 0.41
RAB5B-204ENST00000548068 PHF23Q9BUL5 403 aaPredicted RBP17.64■□□□□ 0.41
RAB5B-204ENST00000548068 UHRF1BP1Q6BDS2 1440 aa17.63■□□□□ 0.41
RAB5B-204ENST00000548068 CLTCQ00610 1675 aaKnown RBP17.61■□□□□ 0.41
RAB5B-204ENST00000548068 SPATA31E1Q6ZUB1 1445 aa17.6■□□□□ 0.41
RAB5B-204ENST00000548068 PREX1Q8TCU6 1659 aa17.6■□□□□ 0.41
RAB5B-204ENST00000548068 NOS1P29475 1434 aa17.59■□□□□ 0.41
RAB5B-204ENST00000548068 STAC3Q96MF2 364 aa17.58■□□□□ 0.4
RAB5B-204ENST00000548068 PIK3C2BO00750 1634 aa17.58■□□□□ 0.4
RAB5B-204ENST00000548068 CFAP65Q6ZU64 1925 aaKnown RBP17.57■□□□□ 0.4
RAB5B-204ENST00000548068 RALGAPBQ86X10 1494 aa17.56■□□□□ 0.4
RAB5B-204ENST00000548068 MROH2AA6NES4 1674 aa17.56■□□□□ 0.4
RAB5B-204ENST00000548068 SYNMO15061 1565 aa17.56■□□□□ 0.4
RAB5B-204ENST00000548068 DCAF11Q8TEB1 546 aa17.55■□□□□ 0.4
RAB5B-204ENST00000548068 ADGRB3O60242 1522 aa17.55■□□□□ 0.4
RAB5B-204ENST00000548068 UGGT1Q9NYU2 1555 aa17.54■□□□□ 0.4
RAB5B-204ENST00000548068 ESF1Q9H501 851 aaKnown RBP17.54■□□□□ 0.4
RAB5B-204ENST00000548068 TRPM1Q7Z4N2 1603 aa17.54■□□□□ 0.4
RAB5B-204ENST00000548068 ARID4BQ4LE39 1312 aaPredicted RBP17.53■□□□□ 0.4
RAB5B-204ENST00000548068 IFT172Q9UG01 1749 aa17.53■□□□□ 0.4
RAB5B-204ENST00000548068 NBPF8Q3BBV2 869 aa17.53■□□□□ 0.4
RAB5B-204ENST00000548068 PRAG1Q86YV5 1406 aa17.53■□□□□ 0.4
RAB5B-204ENST00000548068 ERVK-7P63135 1459 aa17.52■□□□□ 0.4
RAB5B-204ENST00000548068 RGL3Q3MIN7 710 aa17.52■□□□□ 0.4
RAB5B-204ENST00000548068 LAMC1P11047 1609 aa17.51■□□□□ 0.39
RAB5B-204ENST00000548068 SPATA31D1Q6ZQQ2 1576 aa17.51■□□□□ 0.39
RAB5B-204ENST00000548068 MADDQ8WXG6 1647 aa17.5■□□□□ 0.39
RAB5B-204ENST00000548068 MYOM2P54296 1465 aa17.5■□□□□ 0.39
RAB5B-204ENST00000548068 ZNF326Q5BKZ1 582 aaKnown RBP17.5■□□□□ 0.39
RAB5B-204ENST00000548068 SLC52A1Q9NWF4 448 aa17.5■□□□□ 0.39
RAB5B-204ENST00000548068 KDM2AQ9Y2K7 1162 aa17.5■□□□□ 0.39
RAB5B-204ENST00000548068 EIF4G2P78344 907 aaKnown RBP eCLIP17.49■□□□□ 0.39
RAB5B-204ENST00000548068 MLECQ14165 292 aa17.49■□□□□ 0.39
RAB5B-204ENST00000548068 KIAA1210Q9ULL0 1709 aa17.48■□□□□ 0.39
RAB5B-204ENST00000548068 FER1L4A9Z1Z3 1794 aa17.48■□□□□ 0.39
RAB5B-204ENST00000548068 PPLO60437 1756 aa17.48■□□□□ 0.39
RAB5B-204ENST00000548068 DIEXFQ68CQ4 756 aaKnown RBP17.46■□□□□ 0.39
RAB5B-204ENST00000548068 RPGRIP1LQ68CZ1 1315 aa17.46■□□□□ 0.38
RAB5B-204ENST00000548068 ROCK2O75116 1388 aaKnown RBP17.44■□□□□ 0.38
RAB5B-204ENST00000548068 POLR1AO95602 1720 aaPredicted RBP17.44■□□□□ 0.38
RAB5B-204ENST00000548068 TMEM131LA2VDJ0 1609 aa17.43■□□□□ 0.38
RAB5B-204ENST00000548068 ZMYM3Q14202 1370 aa17.43■□□□□ 0.38
RAB5B-204ENST00000548068 GPRASP1Q5JY77 1395 aa17.43■□□□□ 0.38
RAB5B-204ENST00000548068 HSPA5P11021 654 aaKnown RBP17.43■□□□□ 0.38
RAB5B-204ENST00000548068 CHGAP10645 457 aaKnown RBP17.42■□□□□ 0.38
RAB5B-204ENST00000548068 USP47Q96K76 1375 aa17.41■□□□□ 0.38
RAB5B-204ENST00000548068 CARD11Q9BXL7 1154 aa17.41■□□□□ 0.38
RAB5B-204ENST00000548068 MYO5BQ9ULV0 1848 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 191.8 ms