RNA–Protein interactions for RNA: ENST00000546155.5

LTBP4-206, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 1,285 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-206ENST00000546155 PREX1Q8TCU6 1659 aa30.92■■■□□ 2.54
LTBP4-206ENST00000546155 PTPRKQ15262 1439 aa30.91■■■□□ 2.54
LTBP4-206ENST00000546155 MROH2AA6NES4 1674 aa30.91■■■□□ 2.54
LTBP4-206ENST00000546155 ANKRD30AQ9BXX3 1397 aa30.91■■■□□ 2.54
LTBP4-206ENST00000546155 NPATQ14207 1427 aa30.9■■■□□ 2.54
LTBP4-206ENST00000546155 DUOX2Q9NRD8 1548 aa30.9■■■□□ 2.54
LTBP4-206ENST00000546155 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.89■■■□□ 2.54
LTBP4-206ENST00000546155 CROCC2H7BZ55 1655 aa30.88■■■□□ 2.53
LTBP4-206ENST00000546155 ITGAEP38570 1179 aa30.87■■■□□ 2.53
LTBP4-206ENST00000546155 KDM5DQ9BY66 1539 aa30.87■■■□□ 2.53
LTBP4-206ENST00000546155 SETD1BQ9UPS6 1966 aaKnown RBP30.84■■■□□ 2.53
LTBP4-206ENST00000546155 NCOA1Q15788 1441 aa30.83■■■□□ 2.53
LTBP4-206ENST00000546155 ERBINQ96RT1 1412 aa30.81■■■□□ 2.52
LTBP4-206ENST00000546155 RNF17Q9BXT8 1623 aaKnown RBP30.78■■■□□ 2.52
LTBP4-206ENST00000546155 EIF2AK4Q9P2K8 1649 aaKnown RBP30.78■■■□□ 2.52
LTBP4-206ENST00000546155 TNRQ92752 1358 aa30.78■■■□□ 2.52
LTBP4-206ENST00000546155 ABCC3O15438 1527 aa30.77■■■□□ 2.52
LTBP4-206ENST00000546155 PZPP20742 1482 aa30.76■■■□□ 2.52
LTBP4-206ENST00000546155 FAM135AQ9P2D6 1515 aa30.75■■■□□ 2.51
LTBP4-206ENST00000546155 MROH1Q8NDA8 1641 aa30.74■■■□□ 2.51
LTBP4-206ENST00000546155 ADGRL2O95490 1459 aa30.74■■■□□ 2.51
LTBP4-206ENST00000546155 NCKAP5LQ9HCH0 1330 aa30.71■■■□□ 2.51
LTBP4-206ENST00000546155 KANK1Q14678 1352 aa30.7■■■□□ 2.51
LTBP4-206ENST00000546155 DMRT2Q9Y5R5 561 aa30.7■■■□□ 2.51
LTBP4-206ENST00000546155 MYO3AQ8NEV4 1616 aa30.69■■■□□ 2.5
LTBP4-206ENST00000546155 ANKRD50Q9ULJ7 1429 aa30.67■■■□□ 2.5
LTBP4-206ENST00000546155 CAMSAP1Q5T5Y3 1602 aa30.67■■■□□ 2.5
LTBP4-206ENST00000546155 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.66■■■□□ 2.5
LTBP4-206ENST00000546155 CEP170BQ9Y4F5 1589 aaPredicted RBP30.66■■■□□ 2.5
LTBP4-206ENST00000546155 RRBP1Q9P2E9 1410 aaKnown RBP30.65■■■□□ 2.5
LTBP4-206ENST00000546155 A2ML1A8K2U0 1454 aa30.65■■■□□ 2.5
LTBP4-206ENST00000546155 ILDR1Q86SU0 546 aaPredicted RBP30.64■■■□□ 2.5
LTBP4-206ENST00000546155 CEP152O94986 1710 aa30.64■■■□□ 2.5
LTBP4-206ENST00000546155 STRCQ7RTU9 1775 aa30.64■■■□□ 2.49
LTBP4-206ENST00000546155 PRDM15P57071 1507 aaPredicted RBP30.63■■■□□ 2.49
LTBP4-206ENST00000546155 ZC3H13Q5T200 1668 aaKnown RBP30.62■■■□□ 2.49
LTBP4-206ENST00000546155 ERVK-7P63135 1459 aa30.6■■■□□ 2.49
LTBP4-206ENST00000546155 ROCK1Q13464 1354 aa30.6■■■□□ 2.49
LTBP4-206ENST00000546155 ZNF142P52746 1687 aaPredicted RBP30.57■■■□□ 2.48
LTBP4-206ENST00000546155 PTPRTO14522 1441 aa30.56■■■□□ 2.48
LTBP4-206ENST00000546155 DEPDC5O75140 1603 aa30.56■■■□□ 2.48
LTBP4-206ENST00000546155 PKD2Q13563 968 aa30.56■■■□□ 2.48
LTBP4-206ENST00000546155 THEMISQ8N1K5 641 aaPredicted RBP30.55■■■□□ 2.48
LTBP4-206ENST00000546155 SPATA31D1Q6ZQQ2 1576 aa30.54■■■□□ 2.48
LTBP4-206ENST00000546155 NLRP1Q9C000 1473 aa30.54■■■□□ 2.48
LTBP4-206ENST00000546155 ARHGAP31Q2M1Z3 1444 aa30.54■■■□□ 2.48
LTBP4-206ENST00000546155 PLA2R1Q13018 1463 aa30.52■■■□□ 2.48
LTBP4-206ENST00000546155 CERKQ8TCT0 537 aa30.5■■■□□ 2.47
LTBP4-206ENST00000546155 VWDEQ8N2E2 1590 aa30.49■■■□□ 2.47
LTBP4-206ENST00000546155 UGGT1Q9NYU2 1555 aa30.49■■■□□ 2.47
LTBP4-206ENST00000546155 LMTK2Q8IWU2 1503 aa30.48■■■□□ 2.47
LTBP4-206ENST00000546155 CFAP65Q6ZU64 1925 aaKnown RBP30.48■■■□□ 2.47
LTBP4-206ENST00000546155 ANKLE2Q86XL3 938 aa30.47■■■□□ 2.47
LTBP4-206ENST00000546155 STAG3Q9UJ98 1225 aa30.44■■■□□ 2.46
LTBP4-206ENST00000546155 FBXO41Q8TF61 875 aa30.43■■■□□ 2.46
LTBP4-206ENST00000546155 NUP155O75694 1391 aa30.42■■■□□ 2.46
LTBP4-206ENST00000546155 IDI1Q13907 227 aa30.41■■■□□ 2.46
LTBP4-206ENST00000546155 ZNF335Q9H4Z2 1342 aaPredicted RBP30.41■■■□□ 2.46
LTBP4-206ENST00000546155 EFCAB6Q5THR3 1501 aa30.4■■■□□ 2.46
LTBP4-206ENST00000546155 UNC13BO14795 1591 aa30.36■■■□□ 2.45
LTBP4-206ENST00000546155 NOS1P29475 1434 aa30.35■■■□□ 2.45
LTBP4-206ENST00000546155 NAIPQ13075 1403 aa30.33■■■□□ 2.45
LTBP4-206ENST00000546155 TXNDC2Q86VQ3 553 aa30.33■■■□□ 2.45
LTBP4-206ENST00000546155 NPHP4O75161 1426 aaPredicted RBP30.31■■■□□ 2.44
LTBP4-206ENST00000546155 LTKP29376 864 aa30.31■■■□□ 2.44
LTBP4-206ENST00000546155 SYNMO15061 1565 aa30.31■■■□□ 2.44
LTBP4-206ENST00000546155 NEURL4Q96JN8 1562 aa30.3■■■□□ 2.44
LTBP4-206ENST00000546155 SLC52A1Q9NWF4 448 aa30.3■■■□□ 2.44
LTBP4-206ENST00000546155 TET3O43151 1660 aa30.29■■■□□ 2.44
LTBP4-206ENST00000546155 RPRD2Q5VT52 1461 aaKnown RBP30.28■■■□□ 2.44
LTBP4-206ENST00000546155 TRIM52Q96A61 297 aa30.28■■■□□ 2.44
LTBP4-206ENST00000546155 PIK3C2BO00750 1634 aa30.28■■■□□ 2.44
LTBP4-206ENST00000546155 LTBP4Q8N2S1 1624 aa30.28■■■□□ 2.44
LTBP4-206ENST00000546155 CHGAP10645 457 aaKnown RBP30.27■■■□□ 2.44
LTBP4-206ENST00000546155 EID1Q9Y6B2 187 aa30.27■■■□□ 2.44
LTBP4-206ENST00000546155 UBR1Q8IWV7 1749 aa30.27■■■□□ 2.44
LTBP4-206ENST00000546155 SENP3Q9H4L4 574 aaPredicted RBP30.24■■■□□ 2.43
LTBP4-206ENST00000546155 IQGAP3Q86VI3 1631 aa30.24■■■□□ 2.43
LTBP4-206ENST00000546155 TMEM2Q9UHN6 1383 aa30.24■■■□□ 2.43
LTBP4-206ENST00000546155 POLR1AO95602 1720 aaPredicted RBP30.24■■■□□ 2.43
LTBP4-206ENST00000546155 HFM1A2PYH4 1435 aa30.22■■■□□ 2.43
LTBP4-206ENST00000546155 MED14O60244 1454 aa30.22■■■□□ 2.43
LTBP4-206ENST00000546155 SCAF11Q99590 1463 aaKnown RBP30.22■■■□□ 2.43
LTBP4-206ENST00000546155 ARHGAP23Q9P227 1491 aa30.21■■■□□ 2.43
LTBP4-206ENST00000546155 GCC2Q8IWJ2 1684 aa30.2■■■□□ 2.42
LTBP4-206ENST00000546155 SLIT1O75093 1534 aa30.19■■■□□ 2.42
LTBP4-206ENST00000546155 E9PCH4 1651 aa30.18■■■□□ 2.42
LTBP4-206ENST00000546155 ADGRB3O60242 1522 aa30.16■■■□□ 2.42
LTBP4-206ENST00000546155 BCANQ96GW7 911 aa30.15■■■□□ 2.42
LTBP4-206ENST00000546155 IQGAP1P46940 1657 aa30.13■■■□□ 2.41
LTBP4-206ENST00000546155 NUTM2DQ5VT03 806 aaPredicted RBP30.12■■■□□ 2.41
LTBP4-206ENST00000546155 PPP1R15AO75807 674 aaPredicted RBP30.1■■■□□ 2.41
LTBP4-206ENST00000546155 SLC26A8Q96RN1 970 aa30.1■■■□□ 2.41
LTBP4-206ENST00000546155 SLC4A1APQ9BWU0 796 aaKnown RBP30.1■■■□□ 2.41
LTBP4-206ENST00000546155 RIMS2Q9UQ26 1411 aa30.07■■■□□ 2.4
LTBP4-206ENST00000546155 UBAP1LF5GYI3 381 aa30.07■■■□□ 2.4
LTBP4-206ENST00000546155 HDGFP51858 240 aaKnown RBP30.04■■■□□ 2.4
LTBP4-206ENST00000546155 KDM5AP29375 1690 aaKnown RBP30.04■■■□□ 2.4
LTBP4-206ENST00000546155 FOXD1Q16676 465 aa30.03■■■□□ 2.4
LTBP4-206ENST00000546155 IQSEC2Q5JU85 1478 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms