RNA–Protein interactions for RNA: ENST00000546079.5

CLPTM1-203, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-203ENST00000546079 ARID4BQ4LE39 1312 aaPredicted RBP21.94■■□□□ 1.1
CLPTM1-203ENST00000546079 CLASP1Q7Z460 1538 aa21.93■■□□□ 1.1
CLPTM1-203ENST00000546079 ADGRL2O95490 1459 aa21.93■■□□□ 1.1
CLPTM1-203ENST00000546079 LRPPRCP42704 1394 aaKnown RBP21.93■■□□□ 1.1
CLPTM1-203ENST00000546079 NFKBIBQ15653 356 aa21.92■■□□□ 1.1
CLPTM1-203ENST00000546079 TMC1Q8TDI8 760 aa21.92■■□□□ 1.1
CLPTM1-203ENST00000546079 RCAN3Q9UKA8 241 aa21.9■■□□□ 1.1
CLPTM1-203ENST00000546079 ZNF777Q9ULD5 760 aaPredicted RBP21.9■■□□□ 1.1
CLPTM1-203ENST00000546079 FOXD1Q16676 465 aa21.89■■□□□ 1.1
CLPTM1-203ENST00000546079 EIF5BO60841 1220 aaKnown RBP21.89■■□□□ 1.09
CLPTM1-203ENST00000546079 FRAT1Q92837 279 aaPredicted RBP21.88■■□□□ 1.09
CLPTM1-203ENST00000546079 RSPH6AQ9H0K4 717 aa21.88■■□□□ 1.09
CLPTM1-203ENST00000546079 ABCC2Q92887 1545 aa21.87■■□□□ 1.09
CLPTM1-203ENST00000546079 SHANK2Q9UPX8 1470 aa21.85■■□□□ 1.09
CLPTM1-203ENST00000546079 CDC42BPBQ9Y5S2 1711 aa21.85■■□□□ 1.09
CLPTM1-203ENST00000546079 ROCK2O75116 1388 aaKnown RBP21.85■■□□□ 1.09
CLPTM1-203ENST00000546079 PREX2Q70Z35 1606 aa21.84■■□□□ 1.09
CLPTM1-203ENST00000546079 PDE3BQ13370 1112 aa21.84■■□□□ 1.09
CLPTM1-203ENST00000546079 BRD4O60885 1362 aaPredicted RBP21.84■■□□□ 1.09
CLPTM1-203ENST00000546079 FAM43AQ8N2R8 423 aa21.83■■□□□ 1.08
CLPTM1-203ENST00000546079 SENP3-EIF4A1A0A087X0R7 540 aa21.82■■□□□ 1.08
CLPTM1-203ENST00000546079 CNGB1Q14028 1251 aaPredicted RBP21.81■■□□□ 1.08
CLPTM1-203ENST00000546079 KTN1Q86UP2 1357 aaKnown RBP21.81■■□□□ 1.08
CLPTM1-203ENST00000546079 PZPP20742 1482 aa21.81■■□□□ 1.08
CLPTM1-203ENST00000546079 ANKRD30AQ9BXX3 1397 aa21.81■■□□□ 1.08
CLPTM1-203ENST00000546079 ARHGEF5Q12774 1597 aa21.81■■□□□ 1.08
CLPTM1-203ENST00000546079 USP47Q96K76 1375 aa21.8■■□□□ 1.08
CLPTM1-203ENST00000546079 SAMD9LQ8IVG5 1584 aa21.8■■□□□ 1.08
CLPTM1-203ENST00000546079 BCORL1Q5H9F3 1711 aa21.79■■□□□ 1.08
CLPTM1-203ENST00000546079 C9orf84Q5VXU9 1444 aa21.79■■□□□ 1.08
CLPTM1-203ENST00000546079 KIF15Q9NS87 1388 aa21.79■■□□□ 1.08
CLPTM1-203ENST00000546079 TTC37Q6PGP7 1564 aa21.79■■□□□ 1.08
CLPTM1-203ENST00000546079 MBD5Q9P267 1494 aa21.79■■□□□ 1.08
CLPTM1-203ENST00000546079 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.77■■□□□ 1.08
CLPTM1-203ENST00000546079 MYBBP1AQ9BQG0 1328 aaKnown RBP21.77■■□□□ 1.08
CLPTM1-203ENST00000546079 DAXXQ9UER7 740 aaPredicted RBP21.77■■□□□ 1.07
CLPTM1-203ENST00000546079 RALBP1Q15311 655 aa21.76■■□□□ 1.07
CLPTM1-203ENST00000546079 ANKRD50Q9ULJ7 1429 aa21.76■■□□□ 1.07
CLPTM1-203ENST00000546079 POLR3GLQ9BT43 218 aa21.75■■□□□ 1.07
CLPTM1-203ENST00000546079 SLC4A1APQ9BWU0 796 aaKnown RBP21.75■■□□□ 1.07
CLPTM1-203ENST00000546079 UHRF1BP1LA0JNW5 1464 aa21.75■■□□□ 1.07
CLPTM1-203ENST00000546079 ZCCHC11Q5TAX3 1644 aaKnown RBP21.73■■□□□ 1.07
CLPTM1-203ENST00000546079 HNRNPMP52272 730 aaKnown RBP eCLIP21.72■■□□□ 1.073e-10■■■■■ 34.9
CLPTM1-203ENST00000546079 SLC4A3P48751 1232 aa21.71■■□□□ 1.07
CLPTM1-203ENST00000546079 CCDC141Q6ZP82 1450 aa21.71■■□□□ 1.07
CLPTM1-203ENST00000546079 MYO5CQ9NQX4 1742 aa21.71■■□□□ 1.07
CLPTM1-203ENST00000546079 KDM5CP41229 1560 aa21.7■■□□□ 1.06
CLPTM1-203ENST00000546079 TSPY4P0CV99 314 aa21.68■■□□□ 1.06
CLPTM1-203ENST00000546079 TSPY10P0CW01 314 aa21.68■■□□□ 1.06
CLPTM1-203ENST00000546079 ARHGAP5Q13017 1502 aa21.68■■□□□ 1.06
CLPTM1-203ENST00000546079 SYCP2Q9BX26 1530 aa21.68■■□□□ 1.06
CLPTM1-203ENST00000546079 KIAA1107Q9UPP5 1409 aa21.67■■□□□ 1.06
CLPTM1-203ENST00000546079 KDM5DQ9BY66 1539 aa21.67■■□□□ 1.06
CLPTM1-203ENST00000546079 DCAF11Q8TEB1 546 aa21.67■■□□□ 1.06
CLPTM1-203ENST00000546079 FRAT2O75474 233 aaPredicted RBP21.66■■□□□ 1.06
CLPTM1-203ENST00000546079 CRBNQ96SW2 442 aa21.66■■□□□ 1.06
CLPTM1-203ENST00000546079 KDM2BQ8NHM5 1336 aa21.65■■□□□ 1.06
CLPTM1-203ENST00000546079 SKAP1Q86WV1 359 aa21.65■■□□□ 1.06
CLPTM1-203ENST00000546079 MAST1Q9Y2H9 1570 aa21.65■■□□□ 1.06
CLPTM1-203ENST00000546079 FAM161AQ3B820 660 aa21.64■■□□□ 1.06
CLPTM1-203ENST00000546079 RSPH4AQ5TD94 716 aa21.64■■□□□ 1.05
CLPTM1-203ENST00000546079 NLRP13Q86W25 1043 aa21.63■■□□□ 1.05
CLPTM1-203ENST00000546079 PLIN1O60240 522 aa21.62■■□□□ 1.05
CLPTM1-203ENST00000546079 CDCA7LQ96GN5 454 aa21.62■■□□□ 1.05
CLPTM1-203ENST00000546079 INSRP06213 1382 aa21.62■■□□□ 1.05
CLPTM1-203ENST00000546079 CENPQQ7L2Z9 268 aaPredicted RBP21.61■■□□□ 1.05
CLPTM1-203ENST00000546079 UHRF1BP1Q6BDS2 1440 aa21.61■■□□□ 1.05
CLPTM1-203ENST00000546079 C8orf34Q49A92 452 aa21.61■■□□□ 1.05
CLPTM1-203ENST00000546079 PKD2Q13563 968 aa21.6■■□□□ 1.05
CLPTM1-203ENST00000546079 NUP155O75694 1391 aa21.6■■□□□ 1.05
CLPTM1-203ENST00000546079 PLEKHH2Q8IVE3 1493 aa21.59■■□□□ 1.05
CLPTM1-203ENST00000546079 PLCH2O75038 1416 aa21.59■■□□□ 1.05
CLPTM1-203ENST00000546079 RALGAPBQ86X10 1494 aa21.59■■□□□ 1.05
CLPTM1-203ENST00000546079 ZNF326Q5BKZ1 582 aaKnown RBP21.58■■□□□ 1.04
CLPTM1-203ENST00000546079 ARHGEF12Q9NZN5 1544 aa21.58■■□□□ 1.04
CLPTM1-203ENST00000546079 ZMYM4Q5VZL5 1548 aa21.57■■□□□ 1.04
CLPTM1-203ENST00000546079 PARD3Q8TEW0 1356 aa21.57■■□□□ 1.04
CLPTM1-203ENST00000546079 PLXNC1O60486 1568 aa21.56■■□□□ 1.04
CLPTM1-203ENST00000546079 PKNOX2Q96KN3 472 aa21.56■■□□□ 1.04
CLPTM1-203ENST00000546079 GLIPR1L2Q4G1C9 344 aa21.55■■□□□ 1.04
CLPTM1-203ENST00000546079 CARD11Q9BXL7 1154 aa21.54■■□□□ 1.04
CLPTM1-203ENST00000546079 E9PCH4 1651 aa21.53■■□□□ 1.04
CLPTM1-203ENST00000546079 ABCC1P33527 1531 aa21.53■■□□□ 1.04
CLPTM1-203ENST00000546079 UNC13BO14795 1591 aa21.52■■□□□ 1.04
CLPTM1-203ENST00000546079 BLMP54132 1417 aaPredicted RBP21.52■■□□□ 1.03
CLPTM1-203ENST00000546079 FAM135AQ9P2D6 1515 aa21.51■■□□□ 1.03
CLPTM1-203ENST00000546079 ST20-MTHFSA0A0A6YYL1 179 aa21.51■■□□□ 1.03
CLPTM1-203ENST00000546079 ARAP3Q8WWN8 1544 aa21.5■■□□□ 1.03
CLPTM1-203ENST00000546079 C20orf194Q5TEA3 1177 aa21.5■■□□□ 1.03
CLPTM1-203ENST00000546079 L1TD1Q5T7N2 865 aaKnown RBP21.49■■□□□ 1.03
CLPTM1-203ENST00000546079 RRAGDQ9NQL2 400 aaPredicted RBP21.49■■□□□ 1.03
CLPTM1-203ENST00000546079 WDR7Q9Y4E6 1490 aa21.48■■□□□ 1.03
CLPTM1-203ENST00000546079 EFCAB2Q5VUJ9 269 aa21.47■■□□□ 1.03
CLPTM1-203ENST00000546079 POGKQ9P215 609 aa21.45■■□□□ 1.02
CLPTM1-203ENST00000546079 DUOX2Q9NRD8 1548 aa21.45■■□□□ 1.02
CLPTM1-203ENST00000546079 PER1O15534 1290 aaPredicted RBP21.44■■□□□ 1.02
CLPTM1-203ENST00000546079 TRAPPC8Q9Y2L5 1435 aa21.44■■□□□ 1.02
CLPTM1-203ENST00000546079 IQGAP3Q86VI3 1631 aa21.43■■□□□ 1.02
CLPTM1-203ENST00000546079 ABCA9Q8IUA7 1624 aa21.42■■□□□ 1.02
CLPTM1-203ENST00000546079 MAGI2Q86UL8 1455 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms