RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 RSPH4AQ5TD94 716 aa32.06■■■□□ 2.72
FOXA1-202ENST00000545425 PRKRIP1Q9H875 184 aaPredicted RBP32.04■■■□□ 2.72
FOXA1-202ENST00000545425 POGZQ7Z3K3 1410 aa32.02■■■□□ 2.72
FOXA1-202ENST00000545425 RICTORQ6R327 1708 aa32.02■■■□□ 2.72
FOXA1-202ENST00000545425 HNRNPUQ00839 825 aaKnown RBP eCLIP32■■■□□ 2.71
FOXA1-202ENST00000545425 MAGI2Q86UL8 1455 aa32■■■□□ 2.71
FOXA1-202ENST00000545425 TSPY4P0CV99 314 aa32■■■□□ 2.71
FOXA1-202ENST00000545425 TSPY10P0CW01 314 aa32■■■□□ 2.71
FOXA1-202ENST00000545425 KIF7Q2M1P5 1343 aa31.99■■■□□ 2.71
FOXA1-202ENST00000545425 ZNF777Q9ULD5 760 aaPredicted RBP31.99■■■□□ 2.71
FOXA1-202ENST00000545425 ZMYM4Q5VZL5 1548 aa31.99■■■□□ 2.71
FOXA1-202ENST00000545425 RALGAPBQ86X10 1494 aa31.98■■■□□ 2.71
FOXA1-202ENST00000545425 PREX2Q70Z35 1606 aa31.98■■■□□ 2.71
FOXA1-202ENST00000545425 PKD2Q13563 968 aa31.98■■■□□ 2.71
FOXA1-202ENST00000545425 ROCK2O75116 1388 aaKnown RBP31.97■■■□□ 2.71
FOXA1-202ENST00000545425 CCDC141Q6ZP82 1450 aa31.95■■■□□ 2.71
FOXA1-202ENST00000545425 KDM5CP41229 1560 aa31.95■■■□□ 2.7
FOXA1-202ENST00000545425 C11orf95C9JLR9 678 aaPredicted RBP31.94■■■□□ 2.7
FOXA1-202ENST00000545425 MAST1Q9Y2H9 1570 aa31.94■■■□□ 2.7
FOXA1-202ENST00000545425 CDC42BPBQ9Y5S2 1711 aa31.93■■■□□ 2.7
FOXA1-202ENST00000545425 ZNF518AQ6AHZ1 1483 aa31.93■■■□□ 2.7
FOXA1-202ENST00000545425 ARHGEF40Q8TER5 1519 aa31.92■■■□□ 2.7
FOXA1-202ENST00000545425 NUP155O75694 1391 aa31.92■■■□□ 2.7
FOXA1-202ENST00000545425 USP47Q96K76 1375 aa31.91■■■□□ 2.7
FOXA1-202ENST00000545425 ZFYVE16Q7Z3T8 1539 aa31.9■■■□□ 2.7
FOXA1-202ENST00000545425 AFAP1Q8N556 730 aa31.9■■■□□ 2.7
FOXA1-202ENST00000545425 KIF15Q9NS87 1388 aa31.9■■■□□ 2.7
FOXA1-202ENST00000545425 ZBED9Q6R2W3 1325 aa31.88■■■□□ 2.69
FOXA1-202ENST00000545425 YEATS2Q9ULM3 1422 aa31.87■■■□□ 2.69
FOXA1-202ENST00000545425 PLEKHH2Q8IVE3 1493 aa31.86■■■□□ 2.69
FOXA1-202ENST00000545425 SAMD9LQ8IVG5 1584 aa31.86■■■□□ 2.69
FOXA1-202ENST00000545425 ABCC1P33527 1531 aa31.85■■■□□ 2.69
FOXA1-202ENST00000545425 BCANQ96GW7 911 aa31.83■■■□□ 2.69
FOXA1-202ENST00000545425 MRS2Q9HD23 443 aa31.83■■■□□ 2.69
FOXA1-202ENST00000545425 MYT1LQ9UL68 1186 aa31.82■■■□□ 2.68
FOXA1-202ENST00000545425 KTN1Q86UP2 1357 aaKnown RBP31.8■■■□□ 2.68
FOXA1-202ENST00000545425 TRAPPC8Q9Y2L5 1435 aa31.8■■■□□ 2.68
FOXA1-202ENST00000545425 UNC13BO14795 1591 aa31.8■■■□□ 2.68
FOXA1-202ENST00000545425 ATP10AO60312 1499 aa31.8■■■□□ 2.68
FOXA1-202ENST00000545425 DHX29Q7Z478 1369 aaKnown RBP31.79■■■□□ 2.68
FOXA1-202ENST00000545425 BCORL1Q5H9F3 1711 aa31.79■■■□□ 2.68
FOXA1-202ENST00000545425 PLXNC1O60486 1568 aa31.78■■■□□ 2.68
FOXA1-202ENST00000545425 MLH3Q9UHC1 1453 aa31.77■■■□□ 2.68
FOXA1-202ENST00000545425 FAM135AQ9P2D6 1515 aa31.76■■■□□ 2.68
FOXA1-202ENST00000545425 HNRNPMP52272 730 aaKnown RBP eCLIP31.74■■■□□ 2.67
FOXA1-202ENST00000545425 HECW2Q9P2P5 1572 aa31.72■■■□□ 2.67
FOXA1-202ENST00000545425 ADAMTSL3P82987 1691 aa31.71■■■□□ 2.67
FOXA1-202ENST00000545425 SYCP2Q9BX26 1530 aa31.69■■■□□ 2.66
FOXA1-202ENST00000545425 LAMC1P11047 1609 aa31.69■■■□□ 2.66
FOXA1-202ENST00000545425 CCDC184Q52MB2 194 aa31.67■■■□□ 2.66
FOXA1-202ENST00000545425 SPAG9O60271 1321 aaKnown RBP31.66■■■□□ 2.66
FOXA1-202ENST00000545425 IQGAP3Q86VI3 1631 aa31.66■■■□□ 2.66
FOXA1-202ENST00000545425 CARD11Q9BXL7 1154 aa31.65■■■□□ 2.66
FOXA1-202ENST00000545425 FAM9BQ8IZU0 186 aa31.64■■■□□ 2.66
FOXA1-202ENST00000545425 PTPRMP28827 1452 aa31.64■■■□□ 2.66
FOXA1-202ENST00000545425 PPP4R2Q9NY27 417 aa31.63■■■□□ 2.65
FOXA1-202ENST00000545425 MLECQ14165 292 aa31.63■■■□□ 2.65
FOXA1-202ENST00000545425 DUOX2Q9NRD8 1548 aa31.62■■■□□ 2.65
FOXA1-202ENST00000545425 DIP2CQ9Y2E4 1556 aa31.62■■■□□ 2.65
FOXA1-202ENST00000545425 CCDC144AA2RUR9 1427 aa31.62■■■□□ 2.65
FOXA1-202ENST00000545425 SMG6Q86US8 1419 aaKnown RBP31.61■■■□□ 2.65
FOXA1-202ENST00000545425 E9PCH4 1651 aa31.6■■■□□ 2.65
FOXA1-202ENST00000545425 REREQ9P2R6 1566 aa31.6■■■□□ 2.65
FOXA1-202ENST00000545425 TRPM1Q7Z4N2 1603 aa31.6■■■□□ 2.65
FOXA1-202ENST00000545425 ERBINQ96RT1 1412 aa31.59■■■□□ 2.65
FOXA1-202ENST00000545425 EIF2AK4Q9P2K8 1649 aaKnown RBP31.59■■■□□ 2.65
FOXA1-202ENST00000545425 SIGLEC1Q9BZZ2 1709 aa31.59■■■□□ 2.65
FOXA1-202ENST00000545425 ZNF326Q5BKZ1 582 aaKnown RBP31.59■■■□□ 2.65
FOXA1-202ENST00000545425 MADDQ8WXG6 1647 aa31.58■■■□□ 2.65
FOXA1-202ENST00000545425 GPRASP1Q5JY77 1395 aa31.57■■■□□ 2.65
FOXA1-202ENST00000545425 PRAG1Q86YV5 1406 aa31.57■■■□□ 2.64
FOXA1-202ENST00000545425 ABCA6Q8N139 1617 aa31.57■■■□□ 2.64
FOXA1-202ENST00000545425 KIDINS220Q9ULH0 1771 aa31.56■■■□□ 2.64
FOXA1-202ENST00000545425 RALBP1Q15311 655 aa31.55■■■□□ 2.64
FOXA1-202ENST00000545425 BRD4O60885 1362 aaPredicted RBP31.53■■■□□ 2.64
FOXA1-202ENST00000545425 AGLP35573 1532 aa31.52■■■□□ 2.64
FOXA1-202ENST00000545425 RBM19Q9Y4C8 960 aaKnown RBP31.52■■■□□ 2.64
FOXA1-202ENST00000545425 DCAF11Q8TEB1 546 aa31.52■■■□□ 2.64
FOXA1-202ENST00000545425 ATP7AQ04656 1500 aa31.51■■■□□ 2.64
FOXA1-202ENST00000545425 RTEL1-TNFRSF6BF6WH68 1400 aa31.48■■■□□ 2.63
FOXA1-202ENST00000545425 INO80Q9ULG1 1556 aaPredicted RBP31.47■■■□□ 2.63
FOXA1-202ENST00000545425 RIMS1Q86UR5 1692 aaKnown RBP31.47■■■□□ 2.63
FOXA1-202ENST00000545425 WASHC2CQ9Y4E1 1318 aa31.46■■■□□ 2.63
FOXA1-202ENST00000545425 MYBBP1AQ9BQG0 1328 aaKnown RBP31.46■■■□□ 2.63
FOXA1-202ENST00000545425 ANP32EQ9BTT0 268 aa31.45■■■□□ 2.63
FOXA1-202ENST00000545425 PLA2R1Q13018 1463 aa31.45■■■□□ 2.63
FOXA1-202ENST00000545425 PRDM15P57071 1507 aaPredicted RBP31.45■■■□□ 2.62
FOXA1-202ENST00000545425 ST20-MTHFSA0A0A6YYL1 179 aa31.45■■■□□ 2.62
FOXA1-202ENST00000545425 LRPPRCP42704 1394 aaKnown RBP31.44■■■□□ 2.62
FOXA1-202ENST00000545425 NUDCQ9Y266 331 aa31.44■■■□□ 2.62
FOXA1-202ENST00000545425 PNISRQ8TF01 805 aaKnown RBP31.43■■■□□ 2.62
FOXA1-202ENST00000545425 INSRP06213 1382 aa31.43■■■□□ 2.62
FOXA1-202ENST00000545425 A2MP01023 1474 aa31.42■■■□□ 2.62
FOXA1-202ENST00000545425 ESF1Q9H501 851 aaKnown RBP31.42■■■□□ 2.62
FOXA1-202ENST00000545425 RNF123Q5XPI4 1314 aa31.42■■■□□ 2.62
FOXA1-202ENST00000545425 TMC1Q8TDI8 760 aa31.4■■■□□ 2.62
FOXA1-202ENST00000545425 STAC3Q96MF2 364 aa31.4■■■□□ 2.62
FOXA1-202ENST00000545425 FER1L4A9Z1Z3 1794 aa31.4■■■□□ 2.62
FOXA1-202ENST00000545425 KDM2AQ9Y2K7 1162 aa31.4■■■□□ 2.62
FOXA1-202ENST00000545425 PLPPR3Q6T4P5 718 aa31.38■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms