RNA–Protein interactions for RNA: ENST00000544496.5

PCMT1-211, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 2 BASIC

Gene PCMT1, Length 1,628 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-211ENST00000544496 DNAJC5Q9H3Z4 198 aa33.82■■■■□ 3.01
PCMT1-211ENST00000544496 TSPOAP1O95153 1857 aa33.82■■■■□ 3
PCMT1-211ENST00000544496 IQGAP3Q86VI3 1631 aa33.81■■■■□ 3
PCMT1-211ENST00000544496 A2MP01023 1474 aa33.8■■■■□ 3
PCMT1-211ENST00000544496 FOXD1Q16676 465 aa33.79■■■■□ 3
PCMT1-211ENST00000544496 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.79■■■■□ 33e-9■■■■■ 29.8
PCMT1-211ENST00000544496 DEPDC5O75140 1603 aa33.75■■■□□ 2.99
PCMT1-211ENST00000544496 KANK1Q14678 1352 aa33.75■■■□□ 2.99
PCMT1-211ENST00000544496 ZMYM4Q5VZL5 1548 aa33.74■■■□□ 2.99
PCMT1-211ENST00000544496 RPRD2Q5VT52 1461 aaKnown RBP33.73■■■□□ 2.99
PCMT1-211ENST00000544496 KIF3BO15066 747 aa33.72■■■□□ 2.99
PCMT1-211ENST00000544496 FRMPD1Q5SYB0 1578 aa33.7■■■□□ 2.99
PCMT1-211ENST00000544496 ABCA6Q8N139 1617 aa33.69■■■□□ 2.98
PCMT1-211ENST00000544496 PPP1R15AO75807 674 aaPredicted RBP33.68■■■□□ 2.98
PCMT1-211ENST00000544496 PRDM15P57071 1507 aaPredicted RBP33.66■■■□□ 2.98
PCMT1-211ENST00000544496 DIP2CQ9Y2E4 1556 aa33.66■■■□□ 2.98
PCMT1-211ENST00000544496 BCORL1Q5H9F3 1711 aa33.64■■■□□ 2.98
PCMT1-211ENST00000544496 VWDEQ8N2E2 1590 aa33.63■■■□□ 2.97
PCMT1-211ENST00000544496 RNF17Q9BXT8 1623 aaKnown RBP33.62■■■□□ 2.97
PCMT1-211ENST00000544496 YEATS2Q9ULM3 1422 aa33.57■■■□□ 2.96
PCMT1-211ENST00000544496 ATP10AO60312 1499 aa33.57■■■□□ 2.96
PCMT1-211ENST00000544496 MROH1Q8NDA8 1641 aa33.56■■■□□ 2.96
PCMT1-211ENST00000544496 TET3O43151 1660 aa33.56■■■□□ 2.96
PCMT1-211ENST00000544496 ZNF316A6NFI3 1004 aaPredicted RBP33.55■■■□□ 2.96
PCMT1-211ENST00000544496 CCDC144AA2RUR9 1427 aa33.52■■■□□ 2.96
PCMT1-211ENST00000544496 LMTK2Q8IWU2 1503 aa33.52■■■□□ 2.96
PCMT1-211ENST00000544496 REREQ9P2R6 1566 aa33.51■■■□□ 2.96
PCMT1-211ENST00000544496 L3MBTL2Q969R5 705 aa33.51■■■□□ 2.96
PCMT1-211ENST00000544496 TRHP20396 242 aaPredicted RBP33.49■■■□□ 2.95
PCMT1-211ENST00000544496 COL17A1Q9UMD9 1497 aaPredicted RBP33.48■■■□□ 2.95
PCMT1-211ENST00000544496 GGT6Q6P531 493 aa33.46■■■□□ 2.95
PCMT1-211ENST00000544496 E9PCH4 1651 aa33.46■■■□□ 2.95
PCMT1-211ENST00000544496 PLA2R1Q13018 1463 aa33.45■■■□□ 2.95
PCMT1-211ENST00000544496 AGLP35573 1532 aa33.42■■■□□ 2.94
PCMT1-211ENST00000544496 PTPRTO14522 1441 aa33.42■■■□□ 2.94
PCMT1-211ENST00000544496 EFCAB6Q5THR3 1501 aa33.42■■■□□ 2.94
PCMT1-211ENST00000544496 WASHC2CQ9Y4E1 1318 aa33.4■■■□□ 2.94
PCMT1-211ENST00000544496 ARHGEF40Q8TER5 1519 aa33.4■■■□□ 2.94
PCMT1-211ENST00000544496 TRPM2O94759 1503 aa33.38■■■□□ 2.93
PCMT1-211ENST00000544496 PPP6R1Q9UPN7 881 aa33.38■■■□□ 2.93
PCMT1-211ENST00000544496 ZC3H13Q5T200 1668 aaKnown RBP33.36■■■□□ 2.93
PCMT1-211ENST00000544496 SPHKAPQ2M3C7 1700 aa33.35■■■□□ 2.93
PCMT1-211ENST00000544496 ABCC3O15438 1527 aa33.35■■■□□ 2.93
PCMT1-211ENST00000544496 CEP152O94986 1710 aa33.34■■■□□ 2.93
PCMT1-211ENST00000544496 ARHGAP31Q2M1Z3 1444 aa33.27■■■□□ 2.92
PCMT1-211ENST00000544496 CAMSAP1Q5T5Y3 1602 aa33.26■■■□□ 2.91
PCMT1-211ENST00000544496 NPATQ14207 1427 aa33.25■■■□□ 2.91
PCMT1-211ENST00000544496 UHRF1BP1Q6BDS2 1440 aa33.24■■■□□ 2.91
PCMT1-211ENST00000544496 CNTLNQ9NXG0 1405 aa33.22■■■□□ 2.91
PCMT1-211ENST00000544496 NEURL4Q96JN8 1562 aa33.21■■■□□ 2.91
PCMT1-211ENST00000544496 STAC3Q96MF2 364 aa33.21■■■□□ 2.91
PCMT1-211ENST00000544496 DCAF11Q8TEB1 546 aa33.2■■■□□ 2.91
PCMT1-211ENST00000544496 NBPF8Q3BBV2 869 aa33.19■■■□□ 2.9
PCMT1-211ENST00000544496 CLTCL1P53675 1640 aa33.19■■■□□ 2.9
PCMT1-211ENST00000544496 SPATA31E1Q6ZUB1 1445 aa33.18■■■□□ 2.9
PCMT1-211ENST00000544496 RGL3Q3MIN7 710 aa33.17■■■□□ 2.9
PCMT1-211ENST00000544496 NOS1P29475 1434 aa33.13■■■□□ 2.89
PCMT1-211ENST00000544496 DIEXFQ68CQ4 756 aaKnown RBP33.13■■■□□ 2.89
PCMT1-211ENST00000544496 KDM2AQ9Y2K7 1162 aa33.12■■■□□ 2.89
PCMT1-211ENST00000544496 EIF4G2P78344 907 aaKnown RBP eCLIP33.1■■■□□ 2.89
PCMT1-211ENST00000544496 ZNF326Q5BKZ1 582 aaKnown RBP33.1■■■□□ 2.89
PCMT1-211ENST00000544496 SIGLEC1Q9BZZ2 1709 aa33.09■■■□□ 2.89
PCMT1-211ENST00000544496 ESF1Q9H501 851 aaKnown RBP33.07■■■□□ 2.88
PCMT1-211ENST00000544496 RALGAPBQ86X10 1494 aa33.07■■■□□ 2.88
PCMT1-211ENST00000544496 KIF1BO60333 1816 aa33.07■■■□□ 2.88
PCMT1-211ENST00000544496 ARID4BQ4LE39 1312 aaPredicted RBP33.06■■■□□ 2.88
PCMT1-211ENST00000544496 PRAG1Q86YV5 1406 aa33.06■■■□□ 2.88
PCMT1-211ENST00000544496 SLC52A1Q9NWF4 448 aa33.03■■■□□ 2.88
PCMT1-211ENST00000544496 MLECQ14165 292 aa33.02■■■□□ 2.88
PCMT1-211ENST00000544496 UGGT1Q9NYU2 1555 aa33.02■■■□□ 2.88
PCMT1-211ENST00000544496 CLTCQ00610 1675 aaKnown RBP33■■■□□ 2.87
PCMT1-211ENST00000544496 PREX1Q8TCU6 1659 aa32.98■■■□□ 2.87
PCMT1-211ENST00000544496 PIK3C2BO00750 1634 aa32.98■■■□□ 2.87
PCMT1-211ENST00000544496 HSPA5P11021 654 aaKnown RBP32.98■■■□□ 2.87
PCMT1-211ENST00000544496 SYNMO15061 1565 aa32.97■■■□□ 2.87
PCMT1-211ENST00000544496 ADGRB3O60242 1522 aa32.97■■■□□ 2.87
PCMT1-211ENST00000544496 CFAP65Q6ZU64 1925 aaKnown RBP32.97■■■□□ 2.87
PCMT1-211ENST00000544496 RPGRIP1LQ68CZ1 1315 aa32.95■■■□□ 2.87
PCMT1-211ENST00000544496 ERVK-7P63135 1459 aa32.94■■■□□ 2.86
PCMT1-211ENST00000544496 CARD11Q9BXL7 1154 aa32.93■■■□□ 2.86
PCMT1-211ENST00000544496 ROCK2O75116 1388 aaKnown RBP32.93■■■□□ 2.86
PCMT1-211ENST00000544496 TRPM1Q7Z4N2 1603 aa32.92■■■□□ 2.86
PCMT1-211ENST00000544496 MYOM2P54296 1465 aa32.92■■■□□ 2.86
PCMT1-211ENST00000544496 CHGAP10645 457 aaKnown RBP32.91■■■□□ 2.86
PCMT1-211ENST00000544496 HIRIP3Q9BW71 556 aaPredicted RBP32.9■■■□□ 2.86
PCMT1-211ENST00000544496 ZMYM3Q14202 1370 aa32.89■■■□□ 2.86
PCMT1-211ENST00000544496 GPRASP1Q5JY77 1395 aa32.89■■■□□ 2.85
PCMT1-211ENST00000544496 SPATA31D1Q6ZQQ2 1576 aa32.88■■■□□ 2.85
PCMT1-211ENST00000544496 USP47Q96K76 1375 aa32.88■■■□□ 2.85
PCMT1-211ENST00000544496 MADDQ8WXG6 1647 aa32.87■■■□□ 2.85
PCMT1-211ENST00000544496 IDI1Q13907 227 aa32.87■■■□□ 2.85
PCMT1-211ENST00000544496 MROH2AA6NES4 1674 aa32.87■■■□□ 2.85
PCMT1-211ENST00000544496 FBXO31Q5XUX0 539 aaPredicted RBP32.85■■■□□ 2.85
PCMT1-211ENST00000544496 LAMC1P11047 1609 aa32.85■■■□□ 2.85
PCMT1-211ENST00000544496 IFT172Q9UG01 1749 aa32.83■■■□□ 2.85
PCMT1-211ENST00000544496 NRXN1Q9ULB1 1477 aa32.79■■■□□ 2.84
PCMT1-211ENST00000544496 KIAA1210Q9ULL0 1709 aa32.78■■■□□ 2.84
PCMT1-211ENST00000544496 VGFO15240 615 aaPredicted RBP32.77■■■□□ 2.84
PCMT1-211ENST00000544496 NBPF1Q3BBV0 1214 aa32.76■■■□□ 2.83
PCMT1-211ENST00000544496 PPLO60437 1756 aa32.76■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms