RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 MAGI2Q86UL8 1455 aa23.45■■□□□ 1.34
XRCC1-202ENST00000543982 SIN3AQ96ST3 1273 aa23.44■■□□□ 1.34
XRCC1-202ENST00000543982 ATP10AO60312 1499 aa23.42■■□□□ 1.34
XRCC1-202ENST00000543982 PKD2Q13563 968 aa23.41■■□□□ 1.34
XRCC1-202ENST00000543982 UNC13BO14795 1591 aa23.41■■□□□ 1.34
XRCC1-202ENST00000543982 KDM5DQ9BY66 1539 aa23.4■■□□□ 1.34
XRCC1-202ENST00000543982 GGT6Q6P531 493 aa23.39■■□□□ 1.33
XRCC1-202ENST00000543982 ACIN1Q9UKV3 1341 aaKnown RBP23.38■■□□□ 1.33
XRCC1-202ENST00000543982 FAM135AQ9P2D6 1515 aa23.38■■□□□ 1.33
XRCC1-202ENST00000543982 MROH1Q8NDA8 1641 aa23.38■■□□□ 1.33
XRCC1-202ENST00000543982 CLSPNQ9HAW4 1339 aa23.38■■□□□ 1.33
XRCC1-202ENST00000543982 SIGLEC1Q9BZZ2 1709 aa23.37■■□□□ 1.33
XRCC1-202ENST00000543982 EIF2AK4Q9P2K8 1649 aaKnown RBP23.35■■□□□ 1.33
XRCC1-202ENST00000543982 NEUROD1Q13562 356 aa23.34■■□□□ 1.33
XRCC1-202ENST00000543982 ARHGEF40Q8TER5 1519 aa23.34■■□□□ 1.33
XRCC1-202ENST00000543982 DEPDC5O75140 1603 aa23.34■■□□□ 1.33
XRCC1-202ENST00000543982 ANKRD30BQ9BXX2 1392 aa23.34■■□□□ 1.33
XRCC1-202ENST00000543982 VWDEQ8N2E2 1590 aa23.31■■□□□ 1.32
XRCC1-202ENST00000543982 IQGAP3Q86VI3 1631 aa23.31■■□□□ 1.32
XRCC1-202ENST00000543982 PRDM15P57071 1507 aaPredicted RBP23.3■■□□□ 1.32
XRCC1-202ENST00000543982 RNF17Q9BXT8 1623 aaKnown RBP23.3■■□□□ 1.32
XRCC1-202ENST00000543982 REREQ9P2R6 1566 aa23.28■■□□□ 1.32
XRCC1-202ENST00000543982 MLECQ14165 292 aa23.27■■□□□ 1.32
XRCC1-202ENST00000543982 BCORL1Q5H9F3 1711 aa23.27■■□□□ 1.32
XRCC1-202ENST00000543982 KANK1Q14678 1352 aa23.26■■□□□ 1.31
XRCC1-202ENST00000543982 PLA2R1Q13018 1463 aa23.26■■□□□ 1.31
XRCC1-202ENST00000543982 AGLP35573 1532 aa23.26■■□□□ 1.31
XRCC1-202ENST00000543982 WASHC2CQ9Y4E1 1318 aa23.24■■□□□ 1.31
XRCC1-202ENST00000543982 ABCC3O15438 1527 aa23.21■■□□□ 1.31
XRCC1-202ENST00000543982 ARID4BQ4LE39 1312 aaPredicted RBP23.21■■□□□ 1.31
XRCC1-202ENST00000543982 LMTK2Q8IWU2 1503 aa23.19■■□□□ 1.3
XRCC1-202ENST00000543982 E9PCH4 1651 aa23.18■■□□□ 1.3
XRCC1-202ENST00000543982 CEP152O94986 1710 aa23.17■■□□□ 1.3
XRCC1-202ENST00000543982 TET3O43151 1660 aa23.16■■□□□ 1.3
XRCC1-202ENST00000543982 NPATQ14207 1427 aa23.16■■□□□ 1.3
XRCC1-202ENST00000543982 EFCAB6Q5THR3 1501 aa23.14■■□□□ 1.29
XRCC1-202ENST00000543982 RPRD2Q5VT52 1461 aaKnown RBP23.14■■□□□ 1.29
XRCC1-202ENST00000543982 PTPRTO14522 1441 aa23.13■■□□□ 1.29
XRCC1-202ENST00000543982 FBXO31Q5XUX0 539 aaPredicted RBP23.1■■□□□ 1.29
XRCC1-202ENST00000543982 L3MBTL2Q969R5 705 aa23.1■■□□□ 1.29
XRCC1-202ENST00000543982 PPP6R1Q9UPN7 881 aa23.1■■□□□ 1.29
XRCC1-202ENST00000543982 CAMSAP1Q5T5Y3 1602 aa23.07■■□□□ 1.28
XRCC1-202ENST00000543982 TONSLQ96HA7 1378 aa23.07■■□□□ 1.28
XRCC1-202ENST00000543982 CCDC144AA2RUR9 1427 aa23.06■■□□□ 1.28
XRCC1-202ENST00000543982 ARHGAP31Q2M1Z3 1444 aa23.06■■□□□ 1.28
XRCC1-202ENST00000543982 UGGT1Q9NYU2 1555 aa23.06■■□□□ 1.28
XRCC1-202ENST00000543982 PPP1R15AO75807 674 aaPredicted RBP23.05■■□□□ 1.28
XRCC1-202ENST00000543982 TIMELESSQ9UNS1 1208 aa23.05■■□□□ 1.28
XRCC1-202ENST00000543982 CLTCQ00610 1675 aaKnown RBP23.03■■□□□ 1.28
XRCC1-202ENST00000543982 TRPM2O94759 1503 aa23.03■■□□□ 1.28
XRCC1-202ENST00000543982 NOS1P29475 1434 aa23.03■■□□□ 1.28
XRCC1-202ENST00000543982 ZMYM3Q14202 1370 aa23.02■■□□□ 1.28
XRCC1-202ENST00000543982 ZC3H13Q5T200 1668 aaKnown RBP23.02■■□□□ 1.28
XRCC1-202ENST00000543982 RGL3Q3MIN7 710 aa23.01■■□□□ 1.27
XRCC1-202ENST00000543982 CFAP65Q6ZU64 1925 aaKnown RBP23■■□□□ 1.27
XRCC1-202ENST00000543982 SPHKAPQ2M3C7 1700 aa23■■□□□ 1.27
XRCC1-202ENST00000543982 CLTCL1P53675 1640 aa23■■□□□ 1.27
XRCC1-202ENST00000543982 CEBPAP49715 358 aaPredicted RBP23■■□□□ 1.27
XRCC1-202ENST00000543982 ESF1Q9H501 851 aaKnown RBP22.98■■□□□ 1.27
XRCC1-202ENST00000543982 SYNMO15061 1565 aa22.97■■□□□ 1.27
XRCC1-202ENST00000543982 SPATA31E1Q6ZUB1 1445 aa22.97■■□□□ 1.27
XRCC1-202ENST00000543982 IDI1Q13907 227 aa22.96■■□□□ 1.27
XRCC1-202ENST00000543982 NBPF8Q3BBV2 869 aa22.96■■□□□ 1.27
XRCC1-202ENST00000543982 CNTLNQ9NXG0 1405 aa22.96■■□□□ 1.27
XRCC1-202ENST00000543982 ERVK-7P63135 1459 aa22.95■■□□□ 1.26
XRCC1-202ENST00000543982 KDM2AQ9Y2K7 1162 aa22.94■■□□□ 1.26
XRCC1-202ENST00000543982 DCAF11Q8TEB1 546 aa22.93■■□□□ 1.26
XRCC1-202ENST00000543982 PLPPR3Q6T4P5 718 aa22.92■■□□□ 1.26
XRCC1-202ENST00000543982 PREX1Q8TCU6 1659 aa22.91■■□□□ 1.26
XRCC1-202ENST00000543982 CHGAP10645 457 aaKnown RBP22.9■■□□□ 1.26
XRCC1-202ENST00000543982 SPATA31D1Q6ZQQ2 1576 aa22.87■■□□□ 1.25
XRCC1-202ENST00000543982 SLC52A1Q9NWF4 448 aa22.87■■□□□ 1.25
XRCC1-202ENST00000543982 ZNF326Q5BKZ1 582 aaKnown RBP22.86■■□□□ 1.25
XRCC1-202ENST00000543982 PIK3C2BO00750 1634 aa22.86■■□□□ 1.25
XRCC1-202ENST00000543982 MADDQ8WXG6 1647 aa22.86■■□□□ 1.25
XRCC1-202ENST00000543982 ADAMTSL3P82987 1691 aa22.84■■□□□ 1.25
XRCC1-202ENST00000543982 FER1L4A9Z1Z3 1794 aa22.84■■□□□ 1.25
XRCC1-202ENST00000543982 MROH2AA6NES4 1674 aa22.82■■□□□ 1.24
XRCC1-202ENST00000543982 ADGRB3O60242 1522 aa22.82■■□□□ 1.24
XRCC1-202ENST00000543982 TNRQ92752 1358 aa22.82■■□□□ 1.24
XRCC1-202ENST00000543982 C3P01024 1663 aa22.8■■□□□ 1.24
XRCC1-202ENST00000543982 NUTM2DQ5VT03 806 aaPredicted RBP22.8■■□□□ 1.24
XRCC1-202ENST00000543982 UHRF1BP1Q6BDS2 1440 aa22.79■■□□□ 1.24
XRCC1-202ENST00000543982 RIMS1Q86UR5 1692 aaKnown RBP22.78■■□□□ 1.24
XRCC1-202ENST00000543982 ADGRF5Q8IZF2 1346 aa22.78■■□□□ 1.24
XRCC1-202ENST00000543982 PRAG1Q86YV5 1406 aa22.77■■□□□ 1.24
XRCC1-202ENST00000543982 NEURL4Q96JN8 1562 aa22.76■■□□□ 1.23
XRCC1-202ENST00000543982 TMEM131LA2VDJ0 1609 aa22.75■■□□□ 1.23
XRCC1-202ENST00000543982 KIF1BO60333 1816 aa22.75■■□□□ 1.23
XRCC1-202ENST00000543982 NBPF1Q3BBV0 1214 aa22.74■■□□□ 1.23
XRCC1-202ENST00000543982 HIRIP3Q9BW71 556 aaPredicted RBP22.74■■□□□ 1.23
XRCC1-202ENST00000543982 A2ML1A8K2U0 1454 aa22.73■■□□□ 1.23
XRCC1-202ENST00000543982 KDM4FA0A1W2PPD8 638 aa22.72■■□□□ 1.23
XRCC1-202ENST00000543982 SENP3Q9H4L4 574 aaPredicted RBP22.72■■□□□ 1.23
XRCC1-202ENST00000543982 STAG3Q9UJ98 1225 aa22.72■■□□□ 1.23
XRCC1-202ENST00000543982 PTPRMP28827 1452 aa22.7■■□□□ 1.22
XRCC1-202ENST00000543982 RPGRIP1LQ68CZ1 1315 aa22.69■■□□□ 1.22
XRCC1-202ENST00000543982 MYO5BQ9ULV0 1848 aa22.69■■□□□ 1.22
XRCC1-202ENST00000543982 NEXMIFQ5QGS0 1516 aa22.69■■□□□ 1.22
XRCC1-202ENST00000543982 CFAP70Q5T0N1 1121 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms