RNA–Protein interactions for RNA: ENST00000543496.3

TPBG-203, Transcript of trophoblast glycoprotein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TPBG, Length 2,881 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPBG-203ENST00000543496 NLRP13Q86W25 1043 aa22.87■■□□□ 1.25
TPBG-203ENST00000543496 TROQ12816 1431 aaPredicted RBP22.87■■□□□ 1.25
TPBG-203ENST00000543496 GPATCH8Q9UKJ3 1502 aaKnown RBP22.87■■□□□ 1.25
TPBG-203ENST00000543496 PDE3BQ13370 1112 aa22.85■■□□□ 1.25
TPBG-203ENST00000543496 USP35Q9P2H5 1018 aa22.85■■□□□ 1.25
TPBG-203ENST00000543496 ADGRL2O95490 1459 aa22.85■■□□□ 1.25
TPBG-203ENST00000543496 KIAA0586Q9BVV6 1533 aa22.84■■□□□ 1.25
TPBG-203ENST00000543496 ITSN2Q9NZM3 1697 aa22.84■■□□□ 1.25
TPBG-203ENST00000543496 PPM1GO15355 546 aaPredicted RBP22.83■■□□□ 1.24
TPBG-203ENST00000543496 CROCC2H7BZ55 1655 aa22.82■■□□□ 1.24
TPBG-203ENST00000543496 CRBNQ96SW2 442 aa22.82■■□□□ 1.24
TPBG-203ENST00000543496 E9PCH4 1651 aa22.82■■□□□ 1.24
TPBG-203ENST00000543496 ARHGEF12Q9NZN5 1544 aa22.81■■□□□ 1.24
TPBG-203ENST00000543496 PARD3Q8TEW0 1356 aa22.8■■□□□ 1.24
TPBG-203ENST00000543496 CC2D1BQ5T0F9 858 aaKnown RBP22.79■■□□□ 1.24
TPBG-203ENST00000543496 PLB1Q6P1J6 1458 aa22.76■■□□□ 1.23
TPBG-203ENST00000543496 DDRGK1Q96HY6 314 aa22.75■■□□□ 1.23
TPBG-203ENST00000543496 SLC4A3P48751 1232 aa22.74■■□□□ 1.23
TPBG-203ENST00000543496 PER1O15534 1290 aaPredicted RBP22.74■■□□□ 1.23
TPBG-203ENST00000543496 EIF5BO60841 1220 aaKnown RBP22.74■■□□□ 1.23
TPBG-203ENST00000543496 ZNF608Q9ULD9 1512 aaPredicted RBP22.74■■□□□ 1.23
TPBG-203ENST00000543496 C9orf84Q5VXU9 1444 aa22.73■■□□□ 1.23
TPBG-203ENST00000543496 WASHC2CQ9Y4E1 1318 aa22.73■■□□□ 1.23
TPBG-203ENST00000543496 C20orf194Q5TEA3 1177 aa22.72■■□□□ 1.23
TPBG-203ENST00000543496 NBPF1Q3BBV0 1214 aa22.72■■□□□ 1.23
TPBG-203ENST00000543496 RGL3Q3MIN7 710 aa22.72■■□□□ 1.23
TPBG-203ENST00000543496 CEP170Q5SW79 1584 aa22.71■■□□□ 1.23
TPBG-203ENST00000543496 TSPY4P0CV99 314 aa22.7■■□□□ 1.22
TPBG-203ENST00000543496 TSPY10P0CW01 314 aa22.7■■□□□ 1.22
TPBG-203ENST00000543496 ADCY10Q96PN6 1610 aa22.67■■□□□ 1.22
TPBG-203ENST00000543496 NFKBIBQ15653 356 aa22.67■■□□□ 1.22
TPBG-203ENST00000543496 BRPF3Q9ULD4 1205 aa22.67■■□□□ 1.22
TPBG-203ENST00000543496 CDC42BPAQ5VT25 1732 aa22.66■■□□□ 1.22
TPBG-203ENST00000543496 PANK3Q9H999 370 aa22.66■■□□□ 1.22
TPBG-203ENST00000543496 DAXXQ9UER7 740 aaPredicted RBP22.66■■□□□ 1.22
TPBG-203ENST00000543496 GSE1Q14687 1217 aa22.66■■□□□ 1.22
TPBG-203ENST00000543496 BLMP54132 1417 aaPredicted RBP22.65■■□□□ 1.22
TPBG-203ENST00000543496 HNRNPMP52272 730 aaKnown RBP eCLIP22.65■■□□□ 1.22
TPBG-203ENST00000543496 PRAG1Q86YV5 1406 aa22.64■■□□□ 1.22
TPBG-203ENST00000543496 GRIN2AQ12879 1464 aa22.64■■□□□ 1.21
TPBG-203ENST00000543496 KDM5DQ9BY66 1539 aa22.64■■□□□ 1.21
TPBG-203ENST00000543496 DISP3Q9P2K9 1392 aa22.64■■□□□ 1.21
TPBG-203ENST00000543496 PLEKHD1A6NEE1 506 aa22.63■■□□□ 1.21
TPBG-203ENST00000543496 TRPM1Q7Z4N2 1603 aa22.63■■□□□ 1.21
TPBG-203ENST00000543496 MRC2Q9UBG0 1479 aa22.61■■□□□ 1.21
TPBG-203ENST00000543496 SHANK2Q9UPX8 1470 aa22.61■■□□□ 1.21
TPBG-203ENST00000543496 KDM2BQ8NHM5 1336 aa22.61■■□□□ 1.21
TPBG-203ENST00000543496 ADAMTS8Q9UP79 889 aa22.6■■□□□ 1.21
TPBG-203ENST00000543496 CCDC144AA2RUR9 1427 aa22.6■■□□□ 1.21
TPBG-203ENST00000543496 PTPRGP23470 1445 aa22.6■■□□□ 1.21
TPBG-203ENST00000543496 TESK2Q96S53 571 aa22.59■■□□□ 1.21
TPBG-203ENST00000543496 COL17A1Q9UMD9 1497 aaPredicted RBP22.59■■□□□ 1.21
TPBG-203ENST00000543496 ZMYM4Q5VZL5 1548 aa22.59■■□□□ 1.21
TPBG-203ENST00000543496 FRAT1Q92837 279 aaPredicted RBP22.59■■□□□ 1.21
TPBG-203ENST00000543496 CENPQQ7L2Z9 268 aaPredicted RBP22.58■■□□□ 1.2
TPBG-203ENST00000543496 FBLN2P98095 1184 aa22.57■■□□□ 1.2
TPBG-203ENST00000543496 FAM135AQ9P2D6 1515 aa22.56■■□□□ 1.2
TPBG-203ENST00000543496 IFT140Q96RY7 1462 aa22.56■■□□□ 1.2
TPBG-203ENST00000543496 FAM161AQ3B820 660 aa22.56■■□□□ 1.2
TPBG-203ENST00000543496 RGS3P49796 1198 aa22.55■■□□□ 1.2
TPBG-203ENST00000543496 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.55■■□□□ 1.2
TPBG-203ENST00000543496 PLEKHH2Q8IVE3 1493 aa22.55■■□□□ 1.2
TPBG-203ENST00000543496 C8orf34Q49A92 452 aa22.55■■□□□ 1.2
TPBG-203ENST00000543496 CHMP7Q8WUX9 453 aaPredicted RBP22.54■■□□□ 1.2
TPBG-203ENST00000543496 ABCC10Q5T3U5 1492 aa22.54■■□□□ 1.2
TPBG-203ENST00000543496 INSRP06213 1382 aa22.54■■□□□ 1.2
TPBG-203ENST00000543496 ERBINQ96RT1 1412 aa22.54■■□□□ 1.2
TPBG-203ENST00000543496 TMF1P82094 1093 aa22.53■■□□□ 1.2
TPBG-203ENST00000543496 DUSP27Q5VZP5 1158 aa22.53■■□□□ 1.2
TPBG-203ENST00000543496 PLEKHH1Q9ULM0 1364 aa22.53■■□□□ 1.2
TPBG-203ENST00000543496 MAGI1Q96QZ7 1491 aaPredicted RBP22.53■■□□□ 1.2
TPBG-203ENST00000543496 WDR43Q15061 677 aaKnown RBP eCLIP22.52■■□□□ 1.19
TPBG-203ENST00000543496 GPRASP1Q5JY77 1395 aa22.51■■□□□ 1.19
TPBG-203ENST00000543496 A2MP01023 1474 aa22.51■■□□□ 1.19
TPBG-203ENST00000543496 EIF4G3O43432 1585 aaKnown RBP22.51■■□□□ 1.19
TPBG-203ENST00000543496 CARMIL2Q6F5E8 1435 aa22.49■■□□□ 1.19
TPBG-203ENST00000543496 JPH4Q96JJ6 628 aa22.49■■□□□ 1.19
TPBG-203ENST00000543496 FRAT2O75474 233 aaPredicted RBP22.49■■□□□ 1.19
TPBG-203ENST00000543496 PRDM15P57071 1507 aaPredicted RBP22.48■■□□□ 1.19
TPBG-203ENST00000543496 GOLGA2Q08379 1002 aa22.47■■□□□ 1.19
TPBG-203ENST00000543496 ATP10BO94823 1461 aa22.47■■□□□ 1.19
TPBG-203ENST00000543496 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.47■■□□□ 1.19
TPBG-203ENST00000543496 PPP2R1AP30153 589 aa22.46■■□□□ 1.19
TPBG-203ENST00000543496 PLA2R1Q13018 1463 aa22.46■■□□□ 1.19
TPBG-203ENST00000543496 KNSTRNQ9Y448 316 aa22.45■■□□□ 1.18
TPBG-203ENST00000543496 PKNOX2Q96KN3 472 aa22.44■■□□□ 1.18
TPBG-203ENST00000543496 ARHGEF5Q12774 1597 aa22.43■■□□□ 1.18
TPBG-203ENST00000543496 ABCA8O94911 1581 aa22.42■■□□□ 1.18
TPBG-203ENST00000543496 CCDC141Q6ZP82 1450 aa22.42■■□□□ 1.18
TPBG-203ENST00000543496 CCDC146Q8IYE0 955 aa22.42■■□□□ 1.18
TPBG-203ENST00000543496 MYO5CQ9NQX4 1742 aa22.42■■□□□ 1.18
TPBG-203ENST00000543496 LAMC1P11047 1609 aa22.41■■□□□ 1.18
TPBG-203ENST00000543496 ZNF521Q96K83 1311 aa22.41■■□□□ 1.18
TPBG-203ENST00000543496 MAGI2Q86UL8 1455 aa22.4■■□□□ 1.18
TPBG-203ENST00000543496 SLFN5Q08AF3 891 aa22.39■■□□□ 1.17
TPBG-203ENST00000543496 SAMD9LQ8IVG5 1584 aa22.38■■□□□ 1.17
TPBG-203ENST00000543496 BCAR3O75815 825 aa22.37■■□□□ 1.17
TPBG-203ENST00000543496 SPINK5Q9NQ38 1064 aaPredicted RBP22.37■■□□□ 1.17
TPBG-203ENST00000543496 AMER1Q5JTC6 1135 aaPredicted RBP22.36■■□□□ 1.17
TPBG-203ENST00000543496 EIF2AK4Q9P2K8 1649 aaKnown RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms