RNA–Protein interactions for RNA: ENST00000543309.5

TRIM65-204, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-204ENST00000543309 MYT1LQ9UL68 1186 aa23.93■■□□□ 1.42
TRIM65-204ENST00000543309 YEATS2Q9ULM3 1422 aa23.93■■□□□ 1.42
TRIM65-204ENST00000543309 REREQ9P2R6 1566 aa23.92■■□□□ 1.42
TRIM65-204ENST00000543309 DHX29Q7Z478 1369 aaKnown RBP23.91■■□□□ 1.42
TRIM65-204ENST00000543309 A2MP01023 1474 aa23.91■■□□□ 1.42
TRIM65-204ENST00000543309 ATP10AO60312 1499 aa23.89■■□□□ 1.42
TRIM65-204ENST00000543309 FER1L4A9Z1Z3 1794 aa23.87■■□□□ 1.41
TRIM65-204ENST00000543309 UNC13BO14795 1591 aa23.84■■□□□ 1.41
TRIM65-204ENST00000543309 DEPDC5O75140 1603 aa23.83■■□□□ 1.41
TRIM65-204ENST00000543309 AGLP35573 1532 aa23.82■■□□□ 1.4
TRIM65-204ENST00000543309 RNF17Q9BXT8 1623 aaKnown RBP23.81■■□□□ 1.4
TRIM65-204ENST00000543309 KDM5DQ9BY66 1539 aa23.79■■□□□ 1.4
TRIM65-204ENST00000543309 FBXO41Q8TF61 875 aa23.78■■□□□ 1.4
TRIM65-204ENST00000543309 PRDM15P57071 1507 aaPredicted RBP23.77■■□□□ 1.4
TRIM65-204ENST00000543309 MROH1Q8NDA8 1641 aa23.74■■□□□ 1.39
TRIM65-204ENST00000543309 IQGAP3Q86VI3 1631 aa23.73■■□□□ 1.39
TRIM65-204ENST00000543309 KIF3BO15066 747 aa23.73■■□□□ 1.39
TRIM65-204ENST00000543309 VWDEQ8N2E2 1590 aa23.73■■□□□ 1.39
TRIM65-204ENST00000543309 PREX1Q8TCU6 1659 aa23.7■■□□□ 1.39
TRIM65-204ENST00000543309 FAM135AQ9P2D6 1515 aa23.7■■□□□ 1.38
TRIM65-204ENST00000543309 NUP155O75694 1391 aa23.7■■□□□ 1.38
TRIM65-204ENST00000543309 MLECQ14165 292 aa23.7■■□□□ 1.38
TRIM65-204ENST00000543309 TRIM52Q96A61 297 aa23.7■■□□□ 1.38
TRIM65-204ENST00000543309 PZPP20742 1482 aa23.69■■□□□ 1.38
TRIM65-204ENST00000543309 DHX57Q6P158 1386 aaKnown RBP23.69■■□□□ 1.38
TRIM65-204ENST00000543309 KANK1Q14678 1352 aa23.68■■□□□ 1.38
TRIM65-204ENST00000543309 HSPA2P54652 639 aa23.68■■□□□ 1.38
TRIM65-204ENST00000543309 PLPPR3Q6T4P5 718 aa23.68■■□□□ 1.38
TRIM65-204ENST00000543309 ZC3H13Q5T200 1668 aaKnown RBP23.66■■□□□ 1.38
TRIM65-204ENST00000543309 LMTK2Q8IWU2 1503 aa23.65■■□□□ 1.38
TRIM65-204ENST00000543309 PPP6R1Q9UPN7 881 aa23.65■■□□□ 1.38
TRIM65-204ENST00000543309 TET3O43151 1660 aa23.63■■□□□ 1.37
TRIM65-204ENST00000543309 MPHOSPH9Q99550 1183 aa23.62■■□□□ 1.37
TRIM65-204ENST00000543309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.62■■□□□ 1.371e-6■□□□□ 9.8
TRIM65-204ENST00000543309 ABCC3O15438 1527 aa23.6■■□□□ 1.37
TRIM65-204ENST00000543309 GGT6Q6P531 493 aa23.6■■□□□ 1.37
TRIM65-204ENST00000543309 SLC4A1APQ9BWU0 796 aaKnown RBP23.6■■□□□ 1.37
TRIM65-204ENST00000543309 CLSPNQ9HAW4 1339 aa23.59■■□□□ 1.37
TRIM65-204ENST00000543309 CEP152O94986 1710 aa23.59■■□□□ 1.37
TRIM65-204ENST00000543309 EFCAB6Q5THR3 1501 aa23.57■■□□□ 1.36
TRIM65-204ENST00000543309 CCER1Q8TC90 406 aaPredicted RBP23.56■■□□□ 1.36
TRIM65-204ENST00000543309 C3P01024 1663 aa23.55■■□□□ 1.36
TRIM65-204ENST00000543309 CAMSAP1Q5T5Y3 1602 aa23.55■■□□□ 1.36
TRIM65-204ENST00000543309 WASHC2CQ9Y4E1 1318 aa23.54■■□□□ 1.36
TRIM65-204ENST00000543309 E9PCH4 1651 aa23.54■■□□□ 1.36
TRIM65-204ENST00000543309 RPRD2Q5VT52 1461 aaKnown RBP23.53■■□□□ 1.36
TRIM65-204ENST00000543309 UHRF1BP1Q6BDS2 1440 aa23.52■■□□□ 1.36
TRIM65-204ENST00000543309 CEBPAP49715 358 aaPredicted RBP23.52■■□□□ 1.36
TRIM65-204ENST00000543309 PKD2Q13563 968 aa23.52■■□□□ 1.36
TRIM65-204ENST00000543309 STRCQ7RTU9 1775 aa23.52■■□□□ 1.36
TRIM65-204ENST00000543309 ARHGAP31Q2M1Z3 1444 aa23.51■■□□□ 1.35
TRIM65-204ENST00000543309 SETD1BQ9UPS6 1966 aaKnown RBP23.51■■□□□ 1.35
TRIM65-204ENST00000543309 CNTLNQ9NXG0 1405 aa23.5■■□□□ 1.35
TRIM65-204ENST00000543309 MROH2AA6NES4 1674 aa23.5■■□□□ 1.35
TRIM65-204ENST00000543309 CLTCQ00610 1675 aaKnown RBP23.5■■□□□ 1.35
TRIM65-204ENST00000543309 ANKRD30BQ9BXX2 1392 aa23.47■■□□□ 1.35
TRIM65-204ENST00000543309 CERKQ8TCT0 537 aa23.46■■□□□ 1.35
TRIM65-204ENST00000543309 NPATQ14207 1427 aa23.45■■□□□ 1.34
TRIM65-204ENST00000543309 ESF1Q9H501 851 aaKnown RBP23.44■■□□□ 1.34
TRIM65-204ENST00000543309 SPHKAPQ2M3C7 1700 aa23.44■■□□□ 1.34
TRIM65-204ENST00000543309 PTPRTO14522 1441 aa23.43■■□□□ 1.34
TRIM65-204ENST00000543309 FOXD1Q16676 465 aa23.42■■□□□ 1.34
TRIM65-204ENST00000543309 TRPM2O94759 1503 aa23.42■■□□□ 1.34
TRIM65-204ENST00000543309 PLA2R1Q13018 1463 aa23.4■■□□□ 1.34
TRIM65-204ENST00000543309 DMRT2Q9Y5R5 561 aa23.38■■□□□ 1.33
TRIM65-204ENST00000543309 NOS1P29475 1434 aa23.38■■□□□ 1.33
TRIM65-204ENST00000543309 ZMYM3Q14202 1370 aa23.38■■□□□ 1.33
TRIM65-204ENST00000543309 SPATA31D1Q6ZQQ2 1576 aa23.35■■□□□ 1.33
TRIM65-204ENST00000543309 CCDC144AA2RUR9 1427 aa23.34■■□□□ 1.33
TRIM65-204ENST00000543309 ERVK-7P63135 1459 aa23.34■■□□□ 1.33
TRIM65-204ENST00000543309 SYNMO15061 1565 aa23.32■■□□□ 1.32
TRIM65-204ENST00000543309 PIK3C2BO00750 1634 aa23.31■■□□□ 1.32
TRIM65-204ENST00000543309 CLTCL1P53675 1640 aa23.3■■□□□ 1.32
TRIM65-204ENST00000543309 ZNF142P52746 1687 aaPredicted RBP23.3■■□□□ 1.32
TRIM65-204ENST00000543309 NEURL4Q96JN8 1562 aa23.29■■□□□ 1.32
TRIM65-204ENST00000543309 CFAP65Q6ZU64 1925 aaKnown RBP23.29■■□□□ 1.32
TRIM65-204ENST00000543309 MYO3AQ8NEV4 1616 aa23.29■■□□□ 1.32
TRIM65-204ENST00000543309 SIN3AQ96ST3 1273 aa23.28■■□□□ 1.32
TRIM65-204ENST00000543309 ZEB1P37275 1124 aaPredicted RBP23.27■■□□□ 1.32
TRIM65-204ENST00000543309 TIMELESSQ9UNS1 1208 aa23.27■■□□□ 1.32
TRIM65-204ENST00000543309 LTBP4Q8N2S1 1624 aa23.26■■□□□ 1.31
TRIM65-204ENST00000543309 SLC52A1Q9NWF4 448 aa23.25■■□□□ 1.31
TRIM65-204ENST00000543309 FBXO31Q5XUX0 539 aaPredicted RBP23.24■■□□□ 1.31
TRIM65-204ENST00000543309 UGGT1Q9NYU2 1555 aa23.23■■□□□ 1.31
TRIM65-204ENST00000543309 NEUROD1Q13562 356 aa23.23■■□□□ 1.31
TRIM65-204ENST00000543309 KIF1BO60333 1816 aa23.23■■□□□ 1.31
TRIM65-204ENST00000543309 IQSEC2Q5JU85 1478 aa23.22■■□□□ 1.31
TRIM65-204ENST00000543309 TNRQ92752 1358 aa23.21■■□□□ 1.31
TRIM65-204ENST00000543309 SPATA31E1Q6ZUB1 1445 aa23.21■■□□□ 1.31
TRIM65-204ENST00000543309 CEP170BQ9Y4F5 1589 aaPredicted RBP23.21■■□□□ 1.31
TRIM65-204ENST00000543309 TONSLQ96HA7 1378 aa23.2■■□□□ 1.3
TRIM65-204ENST00000543309 KDM5AP29375 1690 aaKnown RBP23.19■■□□□ 1.3
TRIM65-204ENST00000543309 ADGRB3O60242 1522 aa23.19■■□□□ 1.3
TRIM65-204ENST00000543309 NLRP1Q9C000 1473 aa23.18■■□□□ 1.3
TRIM65-204ENST00000543309 IDI1Q13907 227 aa23.15■■□□□ 1.3
TRIM65-204ENST00000543309 TMEM131LA2VDJ0 1609 aa23.15■■□□□ 1.3
TRIM65-204ENST00000543309 L3MBTL2Q969R5 705 aa23.1■■□□□ 1.29
TRIM65-204ENST00000543309 UBR1Q8IWV7 1749 aa23.08■■□□□ 1.29
TRIM65-204ENST00000543309 IFT172Q9UG01 1749 aa23.08■■□□□ 1.29
TRIM65-204ENST00000543309 STAC3Q96MF2 364 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms