RNA–Protein interactions for RNA: ENST00000543237.5

GPHN-204, Transcript of gephyrin, humanhuman

TSL 2 BASIC

Gene GPHN, Length 2,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-204ENST00000543237 ARHGEF40Q8TER5 1519 aa7.67□□□□□ -1.18
GPHN-204ENST00000543237 ZFYVE16Q7Z3T8 1539 aa7.66□□□□□ -1.18
GPHN-204ENST00000543237 MTUS2Q5JR59 1369 aa7.66□□□□□ -1.18
GPHN-204ENST00000543237 RTL5Q5HYW3 569 aaPredicted RBP7.66□□□□□ -1.18
GPHN-204ENST00000543237 POGZQ7Z3K3 1410 aa7.66□□□□□ -1.18
GPHN-204ENST00000543237 MAGI2Q86UL8 1455 aa7.65□□□□□ -1.18
GPHN-204ENST00000543237 ZMYM4Q5VZL5 1548 aa7.65□□□□□ -1.18
GPHN-204ENST00000543237 PREX2Q70Z35 1606 aa7.65□□□□□ -1.19
GPHN-204ENST00000543237 ZNF518AQ6AHZ1 1483 aa7.65□□□□□ -1.19
GPHN-204ENST00000543237 ZNF777Q9ULD5 760 aaPredicted RBP7.64□□□□□ -1.19
GPHN-204ENST00000543237 CDC42BPBQ9Y5S2 1711 aa7.64□□□□□ -1.19
GPHN-204ENST00000543237 BCORL1Q5H9F3 1711 aa7.63□□□□□ -1.19
GPHN-204ENST00000543237 CDC42BPAQ5VT25 1732 aa7.63□□□□□ -1.19
GPHN-204ENST00000543237 NPM2Q86SE8 214 aaKnown RBP7.63□□□□□ -1.19
GPHN-204ENST00000543237 CCNB3Q8WWL7 1395 aa7.63□□□□□ -1.19
GPHN-204ENST00000543237 YEATS2Q9ULM3 1422 aa7.63□□□□□ -1.19
GPHN-204ENST00000543237 RRP9O43818 475 aaKnown RBP7.62□□□□□ -1.19
GPHN-204ENST00000543237 MLECQ14165 292 aa7.62□□□□□ -1.19
GPHN-204ENST00000543237 EHBP1L1Q8N3D4 1523 aa7.62□□□□□ -1.19
GPHN-204ENST00000543237 AFAP1Q8N556 730 aa7.62□□□□□ -1.19
GPHN-204ENST00000543237 CHMP4AQ9BY43 222 aa7.62□□□□□ -1.19
GPHN-204ENST00000543237 CFDP1Q9UEE9 299 aaPredicted RBP7.62□□□□□ -1.19
GPHN-204ENST00000543237 ADAMTSL3P82987 1691 aa7.62□□□□□ -1.19
GPHN-204ENST00000543237 ATP10AO60312 1499 aa7.61□□□□□ -1.19
GPHN-204ENST00000543237 SAMD1Q6SPF0 538 aaPredicted RBP7.61□□□□□ -1.19
GPHN-204ENST00000543237 NAP1L5Q96NT1 182 aaPredicted RBP7.61□□□□□ -1.19
GPHN-204ENST00000543237 ABCC1P33527 1531 aa7.61□□□□□ -1.19
GPHN-204ENST00000543237 C9orf84Q5VXU9 1444 aa7.61□□□□□ -1.19
GPHN-204ENST00000543237 MADDQ8WXG6 1647 aa7.61□□□□□ -1.19
GPHN-204ENST00000543237 HECW2Q9P2P5 1572 aa7.61□□□□□ -1.19
GPHN-204ENST00000543237 ITSN2Q9NZM3 1697 aa7.6□□□□□ -1.19
GPHN-204ENST00000543237 GPATCH8Q9UKJ3 1502 aaKnown RBP7.6□□□□□ -1.19
GPHN-204ENST00000543237 PTPRMP28827 1452 aa7.6□□□□□ -1.19
GPHN-204ENST00000543237 VPS8Q8N3P4 1428 aa7.6□□□□□ -1.19
GPHN-204ENST00000543237 KDM5CP41229 1560 aa7.6□□□□□ -1.19
GPHN-204ENST00000543237 PLEKHH2Q8IVE3 1493 aa7.6□□□□□ -1.19
GPHN-204ENST00000543237 RIMS1Q86UR5 1692 aaKnown RBP7.6□□□□□ -1.19
GPHN-204ENST00000543237 NOP58Q9Y2X3 529 aaKnown RBP7.59□□□□□ -1.19
GPHN-204ENST00000543237 TRAPPC8Q9Y2L5 1435 aa7.59□□□□□ -1.19
GPHN-204ENST00000543237 SUPT6HQ7KZ85 1726 aaKnown RBP7.58□□□□□ -1.2
GPHN-204ENST00000543237 WASHC2CQ9Y4E1 1318 aa7.58□□□□□ -1.2
GPHN-204ENST00000543237 MLH3Q9UHC1 1453 aa7.58□□□□□ -1.2
GPHN-204ENST00000543237 ESF1Q9H501 851 aaKnown RBP7.58□□□□□ -1.2
GPHN-204ENST00000543237 SAMD9LQ8IVG5 1584 aa7.58□□□□□ -1.2
GPHN-204ENST00000543237 SYCP2Q9BX26 1530 aa7.58□□□□□ -1.2
GPHN-204ENST00000543237 SPAG9O60271 1321 aaKnown RBP7.58□□□□□ -1.2
GPHN-204ENST00000543237 FER1L4A9Z1Z3 1794 aa7.58□□□□□ -1.2
GPHN-204ENST00000543237 HNRNPMP52272 730 aaKnown RBP eCLIP7.58□□□□□ -1.21e-6■■■■■ 30.7
GPHN-204ENST00000543237 USP35Q9P2H5 1018 aa7.58□□□□□ -1.2
GPHN-204ENST00000543237 TIAM1Q13009 1591 aa7.58□□□□□ -1.2
GPHN-204ENST00000543237 ARHGEF12Q9NZN5 1544 aa7.58□□□□□ -1.2
GPHN-204ENST00000543237 ZNF219Q9P2Y4 722 aaPredicted RBP7.57□□□□□ -1.2
GPHN-204ENST00000543237 DIP2CQ9Y2E4 1556 aa7.57□□□□□ -1.2
GPHN-204ENST00000543237 HSP90AA2PQ14568 343 aaPredicted RBP7.57□□□□□ -1.2
GPHN-204ENST00000543237 NAP1L2Q9ULW6 460 aaPredicted RBP7.57□□□□□ -1.2
GPHN-204ENST00000543237 ABCA6Q8N139 1617 aa7.57□□□□□ -1.2
GPHN-204ENST00000543237 WASHC2AQ641Q2 1341 aa7.56□□□□□ -1.2
GPHN-204ENST00000543237 KIAA1107Q9UPP5 1409 aa7.56□□□□□ -1.2
GPHN-204ENST00000543237 SPINK5Q9NQ38 1064 aaPredicted RBP7.56□□□□□ -1.2
GPHN-204ENST00000543237 BCCIPQ9P287 314 aaKnown RBP eCLIP7.56□□□□□ -1.2
GPHN-204ENST00000543237 SIGLEC1Q9BZZ2 1709 aa7.56□□□□□ -1.2
GPHN-204ENST00000543237 PAXIP1Q6ZW49 1069 aaPredicted RBP7.56□□□□□ -1.2
GPHN-204ENST00000543237 FAM43AQ8N2R8 423 aa7.56□□□□□ -1.2
GPHN-204ENST00000543237 NCOA2Q15596 1464 aa7.56□□□□□ -1.2
GPHN-204ENST00000543237 KIDINS220Q9ULH0 1771 aa7.55□□□□□ -1.2
GPHN-204ENST00000543237 REREQ9P2R6 1566 aa7.55□□□□□ -1.2
GPHN-204ENST00000543237 NBR1Q14596 966 aa7.55□□□□□ -1.2
GPHN-204ENST00000543237 DHX37Q8IY37 1157 aaKnown RBP7.55□□□□□ -1.2
GPHN-204ENST00000543237 IPO4Q8TEX9 1081 aaKnown RBP7.55□□□□□ -1.2
GPHN-204ENST00000543237 LRRC9Q6ZRR7 1453 aa7.54□□□□□ -1.2
GPHN-204ENST00000543237 ATP7AQ04656 1500 aa7.54□□□□□ -1.2
GPHN-204ENST00000543237 FBXO3Q9UK99 471 aa7.54□□□□□ -1.2
GPHN-204ENST00000543237 ZNF644Q9H582 1327 aaPredicted RBP7.53□□□□□ -1.2
GPHN-204ENST00000543237 DHX57Q6P158 1386 aaKnown RBP7.53□□□□□ -1.2
GPHN-204ENST00000543237 AGLP35573 1532 aa7.53□□□□□ -1.2
GPHN-204ENST00000543237 MAP3K1Q13233 1512 aa7.53□□□□□ -1.2
GPHN-204ENST00000543237 MKRN4PQ13434 485 aaPredicted RBP7.53□□□□□ -1.2
GPHN-204ENST00000543237 C14orf37Q86TY3 774 aa7.52□□□□□ -1.21
GPHN-204ENST00000543237 CAMSAP2Q08AD1 1489 aa7.52□□□□□ -1.21
GPHN-204ENST00000543237 INO80Q9ULG1 1556 aaPredicted RBP7.52□□□□□ -1.21
GPHN-204ENST00000543237 A2MP01023 1474 aa7.52□□□□□ -1.21
GPHN-204ENST00000543237 CCDC141Q6ZP82 1450 aa7.52□□□□□ -1.21
GPHN-204ENST00000543237 TSPY4P0CV99 314 aa7.52□□□□□ -1.21
GPHN-204ENST00000543237 TSPY10P0CW01 314 aa7.52□□□□□ -1.21
GPHN-204ENST00000543237 HSP90B1P14625 803 aaKnown RBP7.52□□□□□ -1.21
GPHN-204ENST00000543237 CALD1Q05682 793 aaKnown RBP7.52□□□□□ -1.21
GPHN-204ENST00000543237 NCLP19338 710 aaKnown RBP7.51□□□□□ -1.21
GPHN-204ENST00000543237 CEBPAP49715 358 aaPredicted RBP7.51□□□□□ -1.21
GPHN-204ENST00000543237 ADGBQ8N7X0 1667 aa7.51□□□□□ -1.21
GPHN-204ENST00000543237 CNTLNQ9NXG0 1405 aa7.51□□□□□ -1.21
GPHN-204ENST00000543237 KANK4Q5T7N3 995 aaPredicted RBP7.51□□□□□ -1.21
GPHN-204ENST00000543237 LMTK3Q96Q04 1460 aa7.5□□□□□ -1.21
GPHN-204ENST00000543237 MBD5Q9P267 1494 aa7.5□□□□□ -1.21
GPHN-204ENST00000543237 GGT6Q6P531 493 aa7.5□□□□□ -1.21
GPHN-204ENST00000543237 BBXQ8WY36 941 aaPredicted RBP7.5□□□□□ -1.21
GPHN-204ENST00000543237 CENPJQ9HC77 1338 aaPredicted RBP7.5□□□□□ -1.21
GPHN-204ENST00000543237 RTEL1-TNFRSF6BF6WH68 1400 aa7.5□□□□□ -1.21
GPHN-204ENST00000543237 PREX1Q8TCU6 1659 aa7.49□□□□□ -1.21
GPHN-204ENST00000543237 HSPA2P54652 639 aa7.49□□□□□ -1.21
GPHN-204ENST00000543237 MYOM3Q5VTT5 1437 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms