RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 GGT6Q6P531 493 aa8.76□□□□□ -1.01
ABCF1-207ENST00000542772 DEPDC5O75140 1603 aa8.75□□□□□ -1.01
ABCF1-207ENST00000542772 VWDEQ8N2E2 1590 aa8.74□□□□□ -1.01
ABCF1-207ENST00000542772 MROH1Q8NDA8 1641 aa8.74□□□□□ -1.01
ABCF1-207ENST00000542772 RNF17Q9BXT8 1623 aaKnown RBP8.74□□□□□ -1.01
ABCF1-207ENST00000542772 ARID4BQ4LE39 1312 aaPredicted RBP8.74□□□□□ -1.01
ABCF1-207ENST00000542772 KDM5DQ9BY66 1539 aa8.74□□□□□ -1.01
ABCF1-207ENST00000542772 UNC13BO14795 1591 aa8.73□□□□□ -1.01
ABCF1-207ENST00000542772 NUP155O75694 1391 aa8.73□□□□□ -1.01
ABCF1-207ENST00000542772 LMTK2Q8IWU2 1503 aa8.72□□□□□ -1.01
ABCF1-207ENST00000542772 FAM135AQ9P2D6 1515 aa8.72□□□□□ -1.01
ABCF1-207ENST00000542772 MPHOSPH9Q99550 1183 aa8.72□□□□□ -1.01
ABCF1-207ENST00000542772 WASHC2CQ9Y4E1 1318 aa8.72□□□□□ -1.01
ABCF1-207ENST00000542772 KANK1Q14678 1352 aa8.72□□□□□ -1.01
ABCF1-207ENST00000542772 PRDM15P57071 1507 aaPredicted RBP8.71□□□□□ -1.01
ABCF1-207ENST00000542772 MLECQ14165 292 aa8.71□□□□□ -1.02
ABCF1-207ENST00000542772 TRIM52Q96A61 297 aa8.71□□□□□ -1.02
ABCF1-207ENST00000542772 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.71□□□□□ -1.027e-10■■□□□ 14
ABCF1-207ENST00000542772 ADAMTSL3P82987 1691 aa8.71□□□□□ -1.02
ABCF1-207ENST00000542772 ARHGAP31Q2M1Z3 1444 aa8.71□□□□□ -1.02
ABCF1-207ENST00000542772 IQGAP3Q86VI3 1631 aa8.7□□□□□ -1.02
ABCF1-207ENST00000542772 ZMYM3Q14202 1370 aa8.7□□□□□ -1.02
ABCF1-207ENST00000542772 PZPP20742 1482 aa8.7□□□□□ -1.02
ABCF1-207ENST00000542772 KDM4FA0A1W2PPD8 638 aa8.69□□□□□ -1.02
ABCF1-207ENST00000542772 SLC4A1APQ9BWU0 796 aaKnown RBP8.69□□□□□ -1.02
ABCF1-207ENST00000542772 CNTLNQ9NXG0 1405 aa8.69□□□□□ -1.02
ABCF1-207ENST00000542772 ABCC3O15438 1527 aa8.68□□□□□ -1.02
ABCF1-207ENST00000542772 ZC3H13Q5T200 1668 aaKnown RBP8.68□□□□□ -1.02
ABCF1-207ENST00000542772 MROH2AA6NES4 1674 aa8.67□□□□□ -1.02
ABCF1-207ENST00000542772 PKD2Q13563 968 aa8.67□□□□□ -1.02
ABCF1-207ENST00000542772 ESF1Q9H501 851 aaKnown RBP8.67□□□□□ -1.02
ABCF1-207ENST00000542772 TET3O43151 1660 aa8.66□□□□□ -1.02
ABCF1-207ENST00000542772 RPRD2Q5VT52 1461 aaKnown RBP8.66□□□□□ -1.02
ABCF1-207ENST00000542772 DHX57Q6P158 1386 aaKnown RBP8.66□□□□□ -1.02
ABCF1-207ENST00000542772 CEP152O94986 1710 aa8.66□□□□□ -1.02
ABCF1-207ENST00000542772 CLTCQ00610 1675 aaKnown RBP8.65□□□□□ -1.02
ABCF1-207ENST00000542772 PTPRTO14522 1441 aa8.65□□□□□ -1.02
ABCF1-207ENST00000542772 NPATQ14207 1427 aa8.65□□□□□ -1.02
ABCF1-207ENST00000542772 FER1L4A9Z1Z3 1794 aa8.65□□□□□ -1.02
ABCF1-207ENST00000542772 E9PCH4 1651 aa8.65□□□□□ -1.03
ABCF1-207ENST00000542772 CAMSAP1Q5T5Y3 1602 aa8.65□□□□□ -1.03
ABCF1-207ENST00000542772 SETD1BQ9UPS6 1966 aaKnown RBP8.64□□□□□ -1.03
ABCF1-207ENST00000542772 NOS1P29475 1434 aa8.64□□□□□ -1.03
ABCF1-207ENST00000542772 ANKRD30BQ9BXX2 1392 aa8.64□□□□□ -1.03
ABCF1-207ENST00000542772 CEBPAP49715 358 aaPredicted RBP8.64□□□□□ -1.03
ABCF1-207ENST00000542772 FBXO31Q5XUX0 539 aaPredicted RBP8.64□□□□□ -1.03
ABCF1-207ENST00000542772 MADDQ8WXG6 1647 aa8.64□□□□□ -1.03
ABCF1-207ENST00000542772 EFCAB6Q5THR3 1501 aa8.64□□□□□ -1.03
ABCF1-207ENST00000542772 PLA2R1Q13018 1463 aa8.64□□□□□ -1.03
ABCF1-207ENST00000542772 CLSPNQ9HAW4 1339 aa8.63□□□□□ -1.03
ABCF1-207ENST00000542772 SLC52A1Q9NWF4 448 aa8.63□□□□□ -1.03
ABCF1-207ENST00000542772 PTPRMP28827 1452 aa8.63□□□□□ -1.03
ABCF1-207ENST00000542772 C3P01024 1663 aa8.62□□□□□ -1.03
ABCF1-207ENST00000542772 CFAP65Q6ZU64 1925 aaKnown RBP8.62□□□□□ -1.03
ABCF1-207ENST00000542772 FOXD1Q16676 465 aa8.62□□□□□ -1.03
ABCF1-207ENST00000542772 SPATA31D1Q6ZQQ2 1576 aa8.61□□□□□ -1.03
ABCF1-207ENST00000542772 IDI1Q13907 227 aa8.61□□□□□ -1.03
ABCF1-207ENST00000542772 RIMS1Q86UR5 1692 aaKnown RBP8.61□□□□□ -1.03
ABCF1-207ENST00000542772 PREX1Q8TCU6 1659 aa8.6□□□□□ -1.03
ABCF1-207ENST00000542772 ERVK-7P63135 1459 aa8.6□□□□□ -1.03
ABCF1-207ENST00000542772 SPHKAPQ2M3C7 1700 aa8.58□□□□□ -1.04
ABCF1-207ENST00000542772 SYNMO15061 1565 aa8.58□□□□□ -1.04
ABCF1-207ENST00000542772 TRPM2O94759 1503 aa8.58□□□□□ -1.04
ABCF1-207ENST00000542772 TNRQ92752 1358 aa8.58□□□□□ -1.04
ABCF1-207ENST00000542772 PIK3C2BO00750 1634 aa8.58□□□□□ -1.04
ABCF1-207ENST00000542772 CCER1Q8TC90 406 aaPredicted RBP8.57□□□□□ -1.04
ABCF1-207ENST00000542772 SIN3AQ96ST3 1273 aa8.57□□□□□ -1.04
ABCF1-207ENST00000542772 TIMELESSQ9UNS1 1208 aa8.57□□□□□ -1.04
ABCF1-207ENST00000542772 NLRP1Q9C000 1473 aa8.57□□□□□ -1.04
ABCF1-207ENST00000542772 NEURL4Q96JN8 1562 aa8.56□□□□□ -1.04
ABCF1-207ENST00000542772 CCDC144AA2RUR9 1427 aa8.55□□□□□ -1.04
ABCF1-207ENST00000542772 THEMISQ8N1K5 641 aaPredicted RBP8.55□□□□□ -1.04
ABCF1-207ENST00000542772 STAC3Q96MF2 364 aa8.55□□□□□ -1.04
ABCF1-207ENST00000542772 KDM5AP29375 1690 aaKnown RBP8.55□□□□□ -1.04
ABCF1-207ENST00000542772 RPGRIP1LQ68CZ1 1315 aa8.54□□□□□ -1.04
ABCF1-207ENST00000542772 SPATA31E1Q6ZUB1 1445 aa8.54□□□□□ -1.04
ABCF1-207ENST00000542772 CLTCL1P53675 1640 aa8.54□□□□□ -1.04
ABCF1-207ENST00000542772 TMEM131LA2VDJ0 1609 aa8.54□□□□□ -1.04
ABCF1-207ENST00000542772 A2ML1A8K2U0 1454 aa8.53□□□□□ -1.04
ABCF1-207ENST00000542772 KIF1BO60333 1816 aa8.53□□□□□ -1.04
ABCF1-207ENST00000542772 PLPPR3Q6T4P5 718 aa8.53□□□□□ -1.04
ABCF1-207ENST00000542772 UGGT1Q9NYU2 1555 aa8.52□□□□□ -1.04
ABCF1-207ENST00000542772 HDGFP51858 240 aaKnown RBP8.52□□□□□ -1.05
ABCF1-207ENST00000542772 NEUROD1Q13562 356 aa8.52□□□□□ -1.05
ABCF1-207ENST00000542772 UHRF1BP1Q6BDS2 1440 aa8.52□□□□□ -1.05
ABCF1-207ENST00000542772 UBR1Q8IWV7 1749 aa8.51□□□□□ -1.05
ABCF1-207ENST00000542772 ZNF142P52746 1687 aaPredicted RBP8.51□□□□□ -1.05
ABCF1-207ENST00000542772 RGL3Q3MIN7 710 aa8.51□□□□□ -1.05
ABCF1-207ENST00000542772 STAG3Q9UJ98 1225 aa8.51□□□□□ -1.05
ABCF1-207ENST00000542772 ARHGAP23Q9P227 1491 aa8.51□□□□□ -1.05
ABCF1-207ENST00000542772 MYO3AQ8NEV4 1616 aa8.51□□□□□ -1.05
ABCF1-207ENST00000542772 TMEM2Q9UHN6 1383 aa8.5□□□□□ -1.05
ABCF1-207ENST00000542772 ADGRB3O60242 1522 aa8.5□□□□□ -1.05
ABCF1-207ENST00000542772 VGFO15240 615 aaPredicted RBP8.5□□□□□ -1.05
ABCF1-207ENST00000542772 PPP1R15AO75807 674 aaPredicted RBP8.5□□□□□ -1.05
ABCF1-207ENST00000542772 ZFYVE9O95405 1425 aa8.5□□□□□ -1.05
ABCF1-207ENST00000542772 CHGAP10645 457 aaKnown RBP8.5□□□□□ -1.05
ABCF1-207ENST00000542772 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.5□□□□□ -1.05
ABCF1-207ENST00000542772 L3MBTL2Q969R5 705 aa8.5□□□□□ -1.05
ABCF1-207ENST00000542772 CEP170BQ9Y4F5 1589 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms