RNA–Protein interactions for RNA: ENST00000541549.2

EIF3A-203, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EIF3A, Length 4,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-203ENST00000541549 WASHC2AQ641Q2 1341 aa15.05■□□□□ -0
EIF3A-203ENST00000541549 ANO8Q9HCE9 1232 aaPredicted RBP15.05■□□□□ -0
EIF3A-203ENST00000541549 RTF1Q92541 710 aaKnown RBP15.04■□□□□ -0
EIF3A-203ENST00000541549 CCDC18Q5T9S5 1454 aa15.04■□□□□ -0
EIF3A-203ENST00000541549 CGNL1Q0VF96 1302 aa15.04■□□□□ -0
EIF3A-203ENST00000541549 ELL2O00472 640 aaPredicted RBP15.03■□□□□ -0
EIF3A-203ENST00000541549 BRPF3Q9ULD4 1205 aa15.03■□□□□ -0
EIF3A-203ENST00000541549 TRIM6-TRIM34B2RNG4 842 aa15.03■□□□□ -0
EIF3A-203ENST00000541549 HDGFL2Q7Z4V5 671 aaPredicted RBP15.03■□□□□ -0
EIF3A-203ENST00000541549 CCDC7Q96M83 1385 aa15.02■□□□□ -0
EIF3A-203ENST00000541549 FOXD4L6Q3SYB3 417 aaPredicted RBP15.02■□□□□ -0
EIF3A-203ENST00000541549 FOXD4L3Q6VB84 417 aaPredicted RBP15.02■□□□□ -0
EIF3A-203ENST00000541549 TOP2AP11388 1531 aaKnown RBP15.01□□□□□ -0.01
EIF3A-203ENST00000541549 E9PSI1 815 aa15.01□□□□□ -0.01
EIF3A-203ENST00000541549 SLC4A10Q6U841 1118 aa15.01□□□□□ -0.01
EIF3A-203ENST00000541549 ANKRD45Q5TZF3 282 aa15□□□□□ -0.01
EIF3A-203ENST00000541549 TULP1O00294 542 aaPredicted RBP15□□□□□ -0.01
EIF3A-203ENST00000541549 ST18O60284 1047 aa14.99□□□□□ -0.01
EIF3A-203ENST00000541549 CDCA7LQ96GN5 454 aa14.99□□□□□ -0.01
EIF3A-203ENST00000541549 TRAK1Q9UPV9 953 aa14.98□□□□□ -0.01
EIF3A-203ENST00000541549 ZKSCAN2Q63HK3 967 aa14.98□□□□□ -0.01
EIF3A-203ENST00000541549 KIF3BO15066 747 aa14.97□□□□□ -0.01
EIF3A-203ENST00000541549 NUTM2DQ5VT03 806 aaPredicted RBP14.97□□□□□ -0.01
EIF3A-203ENST00000541549 CHMP5Q9NZZ3 219 aa14.97□□□□□ -0.01
EIF3A-203ENST00000541549 FRAT2O75474 233 aaPredicted RBP14.96□□□□□ -0.01
EIF3A-203ENST00000541549 MLECQ14165 292 aa14.96□□□□□ -0.01
EIF3A-203ENST00000541549 HMMRO75330 724 aa14.96□□□□□ -0.01
EIF3A-203ENST00000541549 FAM13BQ9NYF5 915 aa14.95□□□□□ -0.02
EIF3A-203ENST00000541549 SKOR2Q2VWA4 1001 aaPredicted RBP14.95□□□□□ -0.02
EIF3A-203ENST00000541549 CCDC184Q52MB2 194 aa14.95□□□□□ -0.02
EIF3A-203ENST00000541549 EFCAB2Q5VUJ9 269 aa14.95□□□□□ -0.02
EIF3A-203ENST00000541549 STK31Q9BXU1 1019 aa14.95□□□□□ -0.02
EIF3A-203ENST00000541549 CNTLNQ9NXG0 1405 aa14.95□□□□□ -0.02
EIF3A-203ENST00000541549 EIF3AQ14152 1382 aaKnown RBP14.95□□□□□ -0.02
EIF3A-203ENST00000541549 MSH5O43196 834 aa14.94□□□□□ -0.02
EIF3A-203ENST00000541549 CCDC144AA2RUR9 1427 aa14.93□□□□□ -0.02
EIF3A-203ENST00000541549 TERF2IPQ9NYB0 399 aa14.92□□□□□ -0.02
EIF3A-203ENST00000541549 AKNAQ7Z591 1439 aa14.92□□□□□ -0.02
EIF3A-203ENST00000541549 PANK1Q8TE04 598 aa14.92□□□□□ -0.02
EIF3A-203ENST00000541549 GNL2Q13823 731 aaKnown RBP14.92□□□□□ -0.02
EIF3A-203ENST00000541549 FAM43AQ8N2R8 423 aa14.92□□□□□ -0.02
EIF3A-203ENST00000541549 PHF14O94880 888 aa14.9□□□□□ -0.02
EIF3A-203ENST00000541549 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.9□□□□□ -0.02
EIF3A-203ENST00000541549 HTATSF1O43719 755 aaKnown RBP14.9□□□□□ -0.02
EIF3A-203ENST00000541549 ADAMTS8Q9UP79 889 aa14.9□□□□□ -0.02
EIF3A-203ENST00000541549 CARMIL2Q6F5E8 1435 aa14.9□□□□□ -0.02
EIF3A-203ENST00000541549 UACAQ9BZF9 1416 aa14.89□□□□□ -0.03
EIF3A-203ENST00000541549 TNNT3P45378 269 aaPredicted RBP14.89□□□□□ -0.03
EIF3A-203ENST00000541549 DZIP1LQ8IYY4 767 aaKnown RBP14.89□□□□□ -0.03
EIF3A-203ENST00000541549 RILPL2Q969X0 211 aa14.89□□□□□ -0.03
EIF3A-203ENST00000541549 C22orf23Q9BZE7 217 aa14.89□□□□□ -0.03
EIF3A-203ENST00000541549 LNPKQ9C0E8 428 aa14.89□□□□□ -0.03
EIF3A-203ENST00000541549 BACH2Q9BYV9 841 aa14.89□□□□□ -0.03
EIF3A-203ENST00000541549 ZNF644Q9H582 1327 aaPredicted RBP14.88□□□□□ -0.03
EIF3A-203ENST00000541549 DDX19BQ9UMR2 479 aa14.87□□□□□ -0.03
EIF3A-203ENST00000541549 SPAG9O60271 1321 aaKnown RBP14.87□□□□□ -0.03
EIF3A-203ENST00000541549 KIF21BO75037 1637 aa14.87□□□□□ -0.03
EIF3A-203ENST00000541549 SMARCA2P51531 1590 aa14.87□□□□□ -0.03
EIF3A-203ENST00000541549 FGD6Q6ZV73 1430 aa14.86□□□□□ -0.03
EIF3A-203ENST00000541549 KIF16BQ96L93 1317 aa14.86□□□□□ -0.03
EIF3A-203ENST00000541549 RSPH4AQ5TD94 716 aa14.86□□□□□ -0.03
EIF3A-203ENST00000541549 CSPP1Q1MSJ5 1256 aa14.86□□□□□ -0.03
EIF3A-203ENST00000541549 HSP90B1P14625 803 aaKnown RBP14.85□□□□□ -0.03
EIF3A-203ENST00000541549 MRE11P49959 708 aa14.84□□□□□ -0.03
EIF3A-203ENST00000541549 ERCC6Q03468 1493 aa14.84□□□□□ -0.03
EIF3A-203ENST00000541549 TRAK2O60296 914 aa14.84□□□□□ -0.03
EIF3A-203ENST00000541549 LMOD3Q0VAK6 560 aa14.84□□□□□ -0.03
EIF3A-203ENST00000541549 NUTM2FA1L443 756 aa14.83□□□□□ -0.03
EIF3A-203ENST00000541549 IGF1RP08069 1367 aa14.83□□□□□ -0.04
EIF3A-203ENST00000541549 CADPSQ9ULU8 1353 aa14.83□□□□□ -0.04
EIF3A-203ENST00000541549 PNISRQ8TF01 805 aaKnown RBP14.82□□□□□ -0.04
EIF3A-203ENST00000541549 CHMP3Q9Y3E7 222 aa14.82□□□□□ -0.04
EIF3A-203ENST00000541549 BRD4O60885 1362 aaPredicted RBP14.82□□□□□ -0.04
EIF3A-203ENST00000541549 MCTP1Q6DN14 999 aa14.82□□□□□ -0.04
EIF3A-203ENST00000541549 NBPF8Q3BBV2 869 aa14.81□□□□□ -0.04
EIF3A-203ENST00000541549 HDGFP51858 240 aaKnown RBP14.81□□□□□ -0.04
EIF3A-203ENST00000541549 REC8O95072 547 aa14.81□□□□□ -0.04
EIF3A-203ENST00000541549 JPH4Q96JJ6 628 aa14.81□□□□□ -0.04
EIF3A-203ENST00000541549 NGEFQ8N5V2 710 aa14.8□□□□□ -0.04
EIF3A-203ENST00000541549 GPATCH3Q96I76 525 aa14.8□□□□□ -0.04
EIF3A-203ENST00000541549 ZNF330Q9Y3S2 320 aaPredicted RBP14.8□□□□□ -0.04
EIF3A-203ENST00000541549 NASPP49321 788 aaPredicted RBP14.8□□□□□ -0.04
EIF3A-203ENST00000541549 RIPK4P57078 832 aa14.8□□□□□ -0.04
EIF3A-203ENST00000541549 TPM4P67936 248 aa14.8□□□□□ -0.04
EIF3A-203ENST00000541549 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.8□□□□□ -0.04
EIF3A-203ENST00000541549 R3HCC1Q9Y3T6 440 aaKnown RBP14.8□□□□□ -0.04
EIF3A-203ENST00000541549 RNF214Q8ND24 703 aa14.8□□□□□ -0.04
EIF3A-203ENST00000541549 LRRC9Q6ZRR7 1453 aa14.79□□□□□ -0.04
EIF3A-203ENST00000541549 ZNF592Q92610 1267 aa14.79□□□□□ -0.04
EIF3A-203ENST00000541549 ATP6V1DQ9Y5K8 247 aa14.79□□□□□ -0.04
EIF3A-203ENST00000541549 ATAD2BQ9ULI0 1458 aa14.79□□□□□ -0.04
EIF3A-203ENST00000541549 SF3A1Q15459 793 aaKnown RBP14.79□□□□□ -0.04
EIF3A-203ENST00000541549 BECN2A8MW95 431 aa14.78□□□□□ -0.04
EIF3A-203ENST00000541549 RUNDC1Q96C34 613 aa14.78□□□□□ -0.04
EIF3A-203ENST00000541549 LTV1Q96GA3 475 aaPredicted RBP14.78□□□□□ -0.04
EIF3A-203ENST00000541549 ANO2Q9NQ90 1003 aa14.78□□□□□ -0.04
EIF3A-203ENST00000541549 WASHC2CQ9Y4E1 1318 aa14.78□□□□□ -0.04
EIF3A-203ENST00000541549 ARAP1Q96P48 1450 aa14.78□□□□□ -0.04
EIF3A-203ENST00000541549 RRBP1Q9P2E9 1410 aaKnown RBP14.78□□□□□ -0.04
EIF3A-203ENST00000541549 GOLGA6L19H0YKK7 550 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms