RNA–Protein interactions for RNA: ENST00000541377.5

CLASP1-215, Transcript of cytoplasmic linker associated protein 1, humanhuman

TSL 5 BASIC

Gene CLASP1, Length 7,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1-215ENST00000541377 PAXIP1Q6ZW49 1069 aaPredicted RBP11.23□□□□□ -0.61
CLASP1-215ENST00000541377 TERF2IPQ9NYB0 399 aa11.23□□□□□ -0.61
CLASP1-215ENST00000541377 ITPRIPQ8IWB1 547 aa11.22□□□□□ -0.61
CLASP1-215ENST00000541377 WDR70Q9NW82 654 aa11.22□□□□□ -0.61
CLASP1-215ENST00000541377 APPP05067 770 aa11.22□□□□□ -0.61
CLASP1-215ENST00000541377 PSME1Q06323 249 aa11.22□□□□□ -0.61
CLASP1-215ENST00000541377 RB1CC1Q8TDY2 1594 aa11.22□□□□□ -0.61
CLASP1-215ENST00000541377 SPDYE4A6NLX3 237 aa11.22□□□□□ -0.61
CLASP1-215ENST00000541377 PCMTD1Q96MG8 357 aaPredicted RBP11.22□□□□□ -0.61
CLASP1-215ENST00000541377 H3BQV1 296 aa11.21□□□□□ -0.62
CLASP1-215ENST00000541377 IFFO2Q5TF58 517 aa11.21□□□□□ -0.62
CLASP1-215ENST00000541377 TPM1P09493 284 aa11.2□□□□□ -0.62
CLASP1-215ENST00000541377 CCDC47Q96A33 483 aaKnown RBP11.2□□□□□ -0.62
CLASP1-215ENST00000541377 WASHC2CQ9Y4E1 1318 aa11.2□□□□□ -0.62
CLASP1-215ENST00000541377 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.2□□□□□ -0.628e-7■■□□□ 12.8
CLASP1-215ENST00000541377 KIF16BQ96L93 1317 aa11.2□□□□□ -0.62
CLASP1-215ENST00000541377 SLC4A3P48751 1232 aa11.2□□□□□ -0.62
CLASP1-215ENST00000541377 NEXNQ0ZGT2 675 aa11.2□□□□□ -0.62
CLASP1-215ENST00000541377 ZFYVE27Q5T4F4 411 aa11.2□□□□□ -0.62
CLASP1-215ENST00000541377 B4GALNT3Q6L9W6 998 aa11.2□□□□□ -0.62
CLASP1-215ENST00000541377 TMEM87AQ8NBN3 555 aa11.2□□□□□ -0.62
CLASP1-215ENST00000541377 WDHD1O75717 1129 aaPredicted RBP11.19□□□□□ -0.62
CLASP1-215ENST00000541377 SMC4Q9NTJ3 1288 aa11.19□□□□□ -0.62
CLASP1-215ENST00000541377 PATL2C9JE40 543 aaKnown RBP11.18□□□□□ -0.62
CLASP1-215ENST00000541377 CCDC70Q6NSX1 233 aa11.18□□□□□ -0.62
CLASP1-215ENST00000541377 CCDC97Q96F63 343 aaPredicted RBP11.18□□□□□ -0.62
CLASP1-215ENST00000541377 NUTM2DQ5VT03 806 aaPredicted RBP11.18□□□□□ -0.62
CLASP1-215ENST00000541377 TEFQ10587 303 aa11.18□□□□□ -0.62
CLASP1-215ENST00000541377 TRIM29Q14134 588 aa11.18□□□□□ -0.62
CLASP1-215ENST00000541377 LMOD3Q0VAK6 560 aa11.17□□□□□ -0.62
CLASP1-215ENST00000541377 FAM184AQ8NB25 1140 aa11.17□□□□□ -0.62
CLASP1-215ENST00000541377 CCDC180Q9P1Z9 1646 aa11.17□□□□□ -0.62
CLASP1-215ENST00000541377 RRP12Q5JTH9 1297 aaKnown RBP11.17□□□□□ -0.62
CLASP1-215ENST00000541377 ERICH2A1L162 156 aa11.17□□□□□ -0.62
CLASP1-215ENST00000541377 CHMP4CQ96CF2 233 aa11.17□□□□□ -0.62
CLASP1-215ENST00000541377 CYB5RLQ6IPT4 315 aa11.16□□□□□ -0.62
CLASP1-215ENST00000541377 CPLX2Q6PUV4 134 aaKnown RBP11.16□□□□□ -0.62
CLASP1-215ENST00000541377 EIF3AQ14152 1382 aaKnown RBP11.16□□□□□ -0.62
CLASP1-215ENST00000541377 CARMIL2Q6F5E8 1435 aa11.16□□□□□ -0.62
CLASP1-215ENST00000541377 TNNT3P45378 269 aaPredicted RBP11.15□□□□□ -0.62
CLASP1-215ENST00000541377 EPS15P42566 896 aa11.15□□□□□ -0.62
CLASP1-215ENST00000541377 PTMSP20962 102 aa11.15□□□□□ -0.62
CLASP1-215ENST00000541377 GBP4Q96PP9 640 aa11.15□□□□□ -0.62
CLASP1-215ENST00000541377 NOL8Q76FK4 1167 aaKnown RBP11.14□□□□□ -0.63
CLASP1-215ENST00000541377 BAZ1BQ9UIG0 1483 aaKnown RBP11.14□□□□□ -0.63
CLASP1-215ENST00000541377 CCDC27Q2M243 656 aa11.14□□□□□ -0.63
CLASP1-215ENST00000541377 FYB1O15117 783 aa11.14□□□□□ -0.63
CLASP1-215ENST00000541377 IPO7O95373 1038 aaKnown RBP11.14□□□□□ -0.63
CLASP1-215ENST00000541377 C9orf78Q9NZ63 289 aaPredicted RBP11.14□□□□□ -0.63
CLASP1-215ENST00000541377 KIF3BO15066 747 aa11.13□□□□□ -0.63
CLASP1-215ENST00000541377 TRDNQ13061 729 aa11.13□□□□□ -0.63
CLASP1-215ENST00000541377 ANKRD20A12PQ8NF67 263 aa11.13□□□□□ -0.63
CLASP1-215ENST00000541377 RDXP35241 583 aaKnown RBP11.13□□□□□ -0.63
CLASP1-215ENST00000541377 IBSPP21815 317 aaPredicted RBP11.13□□□□□ -0.63
CLASP1-215ENST00000541377 EFCAB2Q5VUJ9 269 aa11.13□□□□□ -0.63
CLASP1-215ENST00000541377 PIP4K2BP78356 416 aa11.13□□□□□ -0.63
CLASP1-215ENST00000541377 SUPT16HQ9Y5B9 1047 aaKnown RBP11.13□□□□□ -0.63
CLASP1-215ENST00000541377 SETQ01105 290 aaPredicted RBP11.12□□□□□ -0.63
CLASP1-215ENST00000541377 MCTP1Q6DN14 999 aa11.12□□□□□ -0.63
CLASP1-215ENST00000541377 NFXL1Q6ZNB6 911 aa11.12□□□□□ -0.63
CLASP1-215ENST00000541377 CCAR2Q8N163 923 aaKnown RBP11.12□□□□□ -0.63
CLASP1-215ENST00000541377 NUTM2BA6NNL0 878 aaPredicted RBP11.11□□□□□ -0.63
CLASP1-215ENST00000541377 NUTM2EB1AL46 878 aaPredicted RBP11.11□□□□□ -0.63
CLASP1-215ENST00000541377 NUTM2AQ8IVF1 878 aaPredicted RBP11.11□□□□□ -0.63
CLASP1-215ENST00000541377 KIF27Q86VH2 1401 aa11.11□□□□□ -0.63
CLASP1-215ENST00000541377 HSP90AB2PQ58FF8 381 aa11.1□□□□□ -0.63
CLASP1-215ENST00000541377 PHF14O94880 888 aa11.1□□□□□ -0.63
CLASP1-215ENST00000541377 RWDD1Q9H446 243 aaPredicted RBP11.1□□□□□ -0.63
CLASP1-215ENST00000541377 ROCK2O75116 1388 aaKnown RBP11.1□□□□□ -0.63
CLASP1-215ENST00000541377 HOOK1Q9UJC3 728 aaKnown RBP11.1□□□□□ -0.63
CLASP1-215ENST00000541377 MYCNP04198 464 aaPredicted RBP11.09□□□□□ -0.63
CLASP1-215ENST00000541377 RILPL2Q969X0 211 aa11.09□□□□□ -0.63
CLASP1-215ENST00000541377 MTMR7Q9Y216 660 aa11.09□□□□□ -0.63
CLASP1-215ENST00000541377 EIF2S2P20042 333 aaKnown RBP11.09□□□□□ -0.63
CLASP1-215ENST00000541377 DDX58O95786 925 aaKnown RBP11.09□□□□□ -0.63
CLASP1-215ENST00000541377 NAP1L1P55209 391 aaKnown RBP11.09□□□□□ -0.63
CLASP1-215ENST00000541377 GOLGA6L19H0YKK7 550 aa11.08□□□□□ -0.64
CLASP1-215ENST00000541377 COG3Q96JB2 828 aa11.08□□□□□ -0.64
CLASP1-215ENST00000541377 CPLX1O14810 134 aa11.08□□□□□ -0.64
CLASP1-215ENST00000541377 RBM5P52756 815 aaKnown RBP eCLIP11.08□□□□□ -0.64
CLASP1-215ENST00000541377 MAP3K9P80192 1104 aa11.08□□□□□ -0.64
CLASP1-215ENST00000541377 KTN1Q86UP2 1357 aaKnown RBP11.08□□□□□ -0.64
CLASP1-215ENST00000541377 MPHOSPH10O00566 681 aaKnown RBP11.08□□□□□ -0.64
CLASP1-215ENST00000541377 AK7Q96M32 723 aa11.08□□□□□ -0.64
CLASP1-215ENST00000541377 ATP2B2Q01814 1243 aa11.07□□□□□ -0.64
CLASP1-215ENST00000541377 ARID3AQ99856 593 aa11.07□□□□□ -0.64
CLASP1-215ENST00000541377 RAPGEF4Q8WZA2 1011 aa11.06□□□□□ -0.64
CLASP1-215ENST00000541377 PLIN1O60240 522 aa11.06□□□□□ -0.64
CLASP1-215ENST00000541377 ST18O60284 1047 aa11.05□□□□□ -0.64
CLASP1-215ENST00000541377 TRIM21P19474 475 aaKnown RBP11.05□□□□□ -0.64
CLASP1-215ENST00000541377 OFD1O75665 1012 aa11.04□□□□□ -0.64
CLASP1-215ENST00000541377 BRMS1Q9HCU9 246 aa11.04□□□□□ -0.64
CLASP1-215ENST00000541377 TTLL12Q14166 644 aaPredicted RBP11.04□□□□□ -0.64
CLASP1-215ENST00000541377 DIAPH3Q9NSV4 1193 aa11.04□□□□□ -0.64
CLASP1-215ENST00000541377 BECN2A8MW95 431 aa11.04□□□□□ -0.64
CLASP1-215ENST00000541377 FAM177BA6PVY3 158 aa11.04□□□□□ -0.64
CLASP1-215ENST00000541377 C16orf71Q8IYS4 520 aaPredicted RBP11.04□□□□□ -0.64
CLASP1-215ENST00000541377 GZF1Q9H116 711 aaPredicted RBP11.04□□□□□ -0.64
CLASP1-215ENST00000541377 PMFBP1Q8TBY8 1022 aa11.03□□□□□ -0.64
CLASP1-215ENST00000541377 SLKQ9H2G2 1235 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms