RNA–Protein interactions for RNA: ENST00000541340.5

PPME1-206, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 3,618 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-206ENST00000541340 SMG6Q86US8 1419 aaKnown RBP9.5□□□□□ -0.89
PPME1-206ENST00000541340 TMED8Q6PL24 325 aaPredicted RBP9.5□□□□□ -0.89
PPME1-206ENST00000541340 CCDC94Q9BW85 323 aaPredicted RBP9.49□□□□□ -0.89
PPME1-206ENST00000541340 OFD1O75665 1012 aa9.49□□□□□ -0.89
PPME1-206ENST00000541340 PLIN1O60240 522 aa9.49□□□□□ -0.89
PPME1-206ENST00000541340 NGEFQ8N5V2 710 aa9.49□□□□□ -0.89
PPME1-206ENST00000541340 CLGNO14967 610 aa9.48□□□□□ -0.89
PPME1-206ENST00000541340 TMC1Q8TDI8 760 aa9.48□□□□□ -0.89
PPME1-206ENST00000541340 MYH16Q9H6N6 1097 aa9.48□□□□□ -0.89
PPME1-206ENST00000541340 SOX12O15370 315 aa9.48□□□□□ -0.89
PPME1-206ENST00000541340 FAM193AP78312 1265 aa9.48□□□□□ -0.89
PPME1-206ENST00000541340 CGNQ9P2M7 1197 aaKnown RBP9.48□□□□□ -0.89
PPME1-206ENST00000541340 SYNJ1O43426 1573 aa9.47□□□□□ -0.89
PPME1-206ENST00000541340 IRX5P78411 483 aaPredicted RBP9.47□□□□□ -0.89
PPME1-206ENST00000541340 GZF1Q9H116 711 aaPredicted RBP9.47□□□□□ -0.89
PPME1-206ENST00000541340 AEBP1Q8IUX7 1158 aa9.47□□□□□ -0.89
PPME1-206ENST00000541340 P3H3Q8IVL6 736 aa9.46□□□□□ -0.89
PPME1-206ENST00000541340 BIVM-ERCC5R4GMW8 1640 aa9.46□□□□□ -0.89
PPME1-206ENST00000541340 SLC20A2Q08357 652 aa9.46□□□□□ -0.89
PPME1-206ENST00000541340 MRE11P49959 708 aa9.45□□□□□ -0.9
PPME1-206ENST00000541340 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.45□□□□□ -0.9
PPME1-206ENST00000541340 TRIM44Q96DX7 344 aaPredicted RBP9.45□□□□□ -0.9
PPME1-206ENST00000541340 SLKQ9H2G2 1235 aaPredicted RBP9.45□□□□□ -0.9
PPME1-206ENST00000541340 PATL2C9JE40 543 aaKnown RBP9.45□□□□□ -0.9
PPME1-206ENST00000541340 EIF4G3O43432 1585 aaKnown RBP9.45□□□□□ -0.9
PPME1-206ENST00000541340 ERCC6L2Q5T890 1561 aa9.45□□□□□ -0.9
PPME1-206ENST00000541340 APPP05067 770 aa9.44□□□□□ -0.9
PPME1-206ENST00000541340 CHMP4CQ96CF2 233 aa9.44□□□□□ -0.9
PPME1-206ENST00000541340 CNTLNQ9NXG0 1405 aa9.44□□□□□ -0.9
PPME1-206ENST00000541340 RRP1P56182 461 aaKnown RBP9.44□□□□□ -0.9
PPME1-206ENST00000541340 UQCRHLA0A096LP55 91 aa9.44□□□□□ -0.9
PPME1-206ENST00000541340 UQCRHP07919 91 aa9.44□□□□□ -0.9
PPME1-206ENST00000541340 GRIPAP1Q4V328 841 aa9.43□□□□□ -0.9
PPME1-206ENST00000541340 R3HCC1Q9Y3T6 440 aaKnown RBP9.43□□□□□ -0.9
PPME1-206ENST00000541340 PHLDB1Q86UU1 1377 aa9.43□□□□□ -0.9
PPME1-206ENST00000541340 DYNC1I1O14576 645 aa9.42□□□□□ -0.9
PPME1-206ENST00000541340 FBXO3Q9UK99 471 aa9.42□□□□□ -0.9
PPME1-206ENST00000541340 DNAJC2Q99543 621 aaKnown RBP9.42□□□□□ -0.9
PPME1-206ENST00000541340 ZNF622Q969S3 477 aaKnown RBP eCLIP9.42□□□□□ -0.91e-15■■□□□ 12
PPME1-206ENST00000541340 POLR3GLQ9BT43 218 aa9.42□□□□□ -0.9
PPME1-206ENST00000541340 GRPEL1Q9HAV7 217 aa9.42□□□□□ -0.9
PPME1-206ENST00000541340 FAM43BQ6ZT52 329 aaPredicted RBP9.41□□□□□ -0.9
PPME1-206ENST00000541340 ZBTB9Q96C00 473 aa9.41□□□□□ -0.9
PPME1-206ENST00000541340 CBX1P83916 185 aa9.41□□□□□ -0.9
PPME1-206ENST00000541340 TOP2BQ02880 1626 aa9.4□□□□□ -0.9
PPME1-206ENST00000541340 C8orf34Q49A92 452 aa9.4□□□□□ -0.9
PPME1-206ENST00000541340 KDM5BQ9UGL1 1544 aa9.4□□□□□ -0.91
PPME1-206ENST00000541340 ERCC6Q03468 1493 aa9.39□□□□□ -0.91
PPME1-206ENST00000541340 AXDND1Q5T1B0 1012 aaPredicted RBP9.39□□□□□ -0.91
PPME1-206ENST00000541340 PTMAP06454 111 aaKnown RBP9.39□□□□□ -0.91
PPME1-206ENST00000541340 PRR29P0C7W0 189 aa9.39□□□□□ -0.91
PPME1-206ENST00000541340 C20orf194Q5TEA3 1177 aa9.39□□□□□ -0.91
PPME1-206ENST00000541340 PPRC1Q5VV67 1664 aaKnown RBP9.39□□□□□ -0.91
PPME1-206ENST00000541340 FHAD1B1AJZ9 1412 aa9.38□□□□□ -0.91
PPME1-206ENST00000541340 ZSCAN30Q86W11 494 aa9.38□□□□□ -0.91
PPME1-206ENST00000541340 CDCA7LQ96GN5 454 aa9.38□□□□□ -0.91
PPME1-206ENST00000541340 NCOA2Q15596 1464 aa9.38□□□□□ -0.91
PPME1-206ENST00000541340 KCNJ4P48050 445 aa9.38□□□□□ -0.91
PPME1-206ENST00000541340 SPRYD3Q8NCJ5 442 aa9.38□□□□□ -0.91
PPME1-206ENST00000541340 CRBNQ96SW2 442 aa9.38□□□□□ -0.91
PPME1-206ENST00000541340 CCDC7Q96M83 1385 aa9.38□□□□□ -0.91
PPME1-206ENST00000541340 EIF4G2P78344 907 aaKnown RBP eCLIP9.37□□□□□ -0.91
PPME1-206ENST00000541340 RCAN3Q9UKA8 241 aa9.37□□□□□ -0.91
PPME1-206ENST00000541340 PDS5BQ9NTI5 1447 aa9.37□□□□□ -0.91
PPME1-206ENST00000541340 CFTRP13569 1480 aa9.37□□□□□ -0.91
PPME1-206ENST00000541340 TAOK2Q9UL54 1235 aa9.37□□□□□ -0.91
PPME1-206ENST00000541340 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.37□□□□□ -0.91
PPME1-206ENST00000541340 GEMIN8Q9NWZ8 242 aaKnown RBP9.37□□□□□ -0.91
PPME1-206ENST00000541340 TICAM2Q86XR7 235 aa9.36□□□□□ -0.91
PPME1-206ENST00000541340 YY1AP1Q9H869 796 aa9.36□□□□□ -0.91
PPME1-206ENST00000541340 AQRO60306 1485 aaKnown RBP eCLIP9.36□□□□□ -0.914e-7■■■■□ 22.3
PPME1-206ENST00000541340 KIF7Q2M1P5 1343 aa9.35□□□□□ -0.91
PPME1-206ENST00000541340 SEC24BO95487 1268 aa9.35□□□□□ -0.91
PPME1-206ENST00000541340 ATP2B3Q16720 1220 aa9.35□□□□□ -0.91
PPME1-206ENST00000541340 IGSF3O75054 1194 aa9.35□□□□□ -0.91
PPME1-206ENST00000541340 RALBP1Q15311 655 aa9.35□□□□□ -0.91
PPME1-206ENST00000541340 CCDC9Q9Y3X0 531 aaKnown RBP9.35□□□□□ -0.91
PPME1-206ENST00000541340 URB2Q14146 1524 aaKnown RBP9.34□□□□□ -0.91
PPME1-206ENST00000541340 MSNP26038 577 aaKnown RBP9.34□□□□□ -0.91
PPME1-206ENST00000541340 CC2D1BQ5T0F9 858 aaKnown RBP9.34□□□□□ -0.91
PPME1-206ENST00000541340 CARD10Q9BWT7 1032 aa9.34□□□□□ -0.91
PPME1-206ENST00000541340 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.34□□□□□ -0.91
PPME1-206ENST00000541340 PTMSP20962 102 aa9.34□□□□□ -0.91
PPME1-206ENST00000541340 PNISRQ8TF01 805 aaKnown RBP9.33□□□□□ -0.92
PPME1-206ENST00000541340 ANTXR1Q9H6X2 564 aa9.33□□□□□ -0.92
PPME1-206ENST00000541340 ISY1Q9ULR0 285 aaKnown RBP9.33□□□□□ -0.92
PPME1-206ENST00000541340 ERICH3Q5RHP9 1530 aa9.33□□□□□ -0.92
PPME1-206ENST00000541340 EP400NLQ6ZTU2 488 aa9.33□□□□□ -0.92
PPME1-206ENST00000541340 TRIM6-TRIM34B2RNG4 842 aa9.33□□□□□ -0.92
PPME1-206ENST00000541340 TRIM34Q9BYJ4 488 aa9.33□□□□□ -0.92
PPME1-206ENST00000541340 NCOA1Q15788 1441 aa9.32□□□□□ -0.92
PPME1-206ENST00000541340 USP19O94966 1318 aa9.32□□□□□ -0.92
PPME1-206ENST00000541340 CAPN2P17655 700 aa9.32□□□□□ -0.92
PPME1-206ENST00000541340 MLECQ14165 292 aa9.32□□□□□ -0.92
PPME1-206ENST00000541340 FAM161AQ3B820 660 aa9.32□□□□□ -0.92
PPME1-206ENST00000541340 PBRM1Q86U86 1689 aa9.32□□□□□ -0.92
PPME1-206ENST00000541340 LOC102724159A0A0B4J2E5 919 aa9.31□□□□□ -0.92
PPME1-206ENST00000541340 TRAK2O60296 914 aa9.31□□□□□ -0.92
PPME1-206ENST00000541340 MCM4P33991 863 aa9.31□□□□□ -0.92
PPME1-206ENST00000541340 PWP2Q15269 919 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms