RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 GLI2P10070 1586 aa21.75■■□□□ 1.07
CLPTM1-202ENST00000541297 POGZQ7Z3K3 1410 aa21.74■■□□□ 1.07
CLPTM1-202ENST00000541297 L3MBTL2Q969R5 705 aa21.73■■□□□ 1.07
CLPTM1-202ENST00000541297 NEO1Q92859 1461 aa21.73■■□□□ 1.07
CLPTM1-202ENST00000541297 IQGAP3Q86VI3 1631 aa21.73■■□□□ 1.07
CLPTM1-202ENST00000541297 RAPGEF3O95398 923 aa21.72■■□□□ 1.07
CLPTM1-202ENST00000541297 KDM5CP41229 1560 aa21.71■■□□□ 1.07
CLPTM1-202ENST00000541297 MAGI2Q86UL8 1455 aa21.7■■□□□ 1.06
CLPTM1-202ENST00000541297 TEX14Q8IWB6 1497 aa21.68■■□□□ 1.06
CLPTM1-202ENST00000541297 HECW2Q9P2P5 1572 aa21.68■■□□□ 1.06
CLPTM1-202ENST00000541297 KIF3BO15066 747 aa21.67■■□□□ 1.06
CLPTM1-202ENST00000541297 DHX29Q7Z478 1369 aaKnown RBP21.66■■□□□ 1.06
CLPTM1-202ENST00000541297 HIRIP3Q9BW71 556 aaPredicted RBP21.66■■□□□ 1.06
CLPTM1-202ENST00000541297 RICTORQ6R327 1708 aa21.65■■□□□ 1.06
CLPTM1-202ENST00000541297 DEPDC5O75140 1603 aa21.65■■□□□ 1.06
CLPTM1-202ENST00000541297 PPRC1Q5VV67 1664 aaKnown RBP21.64■■□□□ 1.06
CLPTM1-202ENST00000541297 KIF13AQ9H1H9 1805 aa21.64■■□□□ 1.05
CLPTM1-202ENST00000541297 MLH3Q9UHC1 1453 aa21.64■■□□□ 1.05
CLPTM1-202ENST00000541297 ABCA6Q8N139 1617 aa21.63■■□□□ 1.05
CLPTM1-202ENST00000541297 EIF2AK4Q9P2K8 1649 aaKnown RBP21.62■■□□□ 1.05
CLPTM1-202ENST00000541297 A2MP01023 1474 aa21.62■■□□□ 1.05
CLPTM1-202ENST00000541297 E9PCH4 1651 aa21.59■■□□□ 1.05
CLPTM1-202ENST00000541297 PLA2R1Q13018 1463 aa21.59■■□□□ 1.05
CLPTM1-202ENST00000541297 FRMPD1Q5SYB0 1578 aa21.58■■□□□ 1.05
CLPTM1-202ENST00000541297 NBPF8Q3BBV2 869 aa21.58■■□□□ 1.05
CLPTM1-202ENST00000541297 MROH1Q8NDA8 1641 aa21.58■■□□□ 1.04
CLPTM1-202ENST00000541297 CCDC144AA2RUR9 1427 aa21.58■■□□□ 1.04
CLPTM1-202ENST00000541297 KANK1Q14678 1352 aa21.57■■□□□ 1.04
CLPTM1-202ENST00000541297 PRDM15P57071 1507 aaPredicted RBP21.56■■□□□ 1.04
CLPTM1-202ENST00000541297 ZNF326Q5BKZ1 582 aaKnown RBP21.56■■□□□ 1.04
CLPTM1-202ENST00000541297 DIP2CQ9Y2E4 1556 aa21.54■■□□□ 1.04
CLPTM1-202ENST00000541297 SUPT16HQ9Y5B9 1047 aaKnown RBP21.54■■□□□ 1.04
CLPTM1-202ENST00000541297 TET3O43151 1660 aa21.54■■□□□ 1.04
CLPTM1-202ENST00000541297 YEATS2Q9ULM3 1422 aa21.53■■□□□ 1.04
CLPTM1-202ENST00000541297 VWDEQ8N2E2 1590 aa21.53■■□□□ 1.04
CLPTM1-202ENST00000541297 GGT6Q6P531 493 aa21.52■■□□□ 1.04
CLPTM1-202ENST00000541297 CEP152O94986 1710 aa21.52■■□□□ 1.04
CLPTM1-202ENST00000541297 RGL3Q3MIN7 710 aa21.51■■□□□ 1.03
CLPTM1-202ENST00000541297 KDM2AQ9Y2K7 1162 aa21.51■■□□□ 1.03
CLPTM1-202ENST00000541297 RNF17Q9BXT8 1623 aaKnown RBP21.51■■□□□ 1.03
CLPTM1-202ENST00000541297 SPHKAPQ2M3C7 1700 aa21.5■■□□□ 1.03
CLPTM1-202ENST00000541297 DCAF11Q8TEB1 546 aa21.49■■□□□ 1.03
CLPTM1-202ENST00000541297 ATP10AO60312 1499 aa21.48■■□□□ 1.03
CLPTM1-202ENST00000541297 CFAP65Q6ZU64 1925 aaKnown RBP21.46■■□□□ 1.03
CLPTM1-202ENST00000541297 HSPA5P11021 654 aaKnown RBP21.45■■□□□ 1.02
CLPTM1-202ENST00000541297 ZMYM4Q5VZL5 1548 aa21.45■■□□□ 1.02
CLPTM1-202ENST00000541297 BCORL1Q5H9F3 1711 aa21.45■■□□□ 1.02
CLPTM1-202ENST00000541297 TRPM2O94759 1503 aa21.44■■□□□ 1.02
CLPTM1-202ENST00000541297 EFCAB6Q5THR3 1501 aa21.44■■□□□ 1.02
CLPTM1-202ENST00000541297 EIF4G2P78344 907 aaKnown RBP eCLIP21.43■■□□□ 1.02
CLPTM1-202ENST00000541297 COL17A1Q9UMD9 1497 aaPredicted RBP21.42■■□□□ 1.02
CLPTM1-202ENST00000541297 DDX10Q13206 875 aaKnown RBP21.42■■□□□ 1.02
CLPTM1-202ENST00000541297 CLTCL1P53675 1640 aa21.41■■□□□ 1.02
CLPTM1-202ENST00000541297 WASHC2CQ9Y4E1 1318 aa21.41■■□□□ 1.02
CLPTM1-202ENST00000541297 PTPRTO14522 1441 aa21.41■■□□□ 1.02
CLPTM1-202ENST00000541297 LMTK2Q8IWU2 1503 aa21.39■■□□□ 1.02
CLPTM1-202ENST00000541297 UHRF1BP1Q6BDS2 1440 aa21.39■■□□□ 1.02
CLPTM1-202ENST00000541297 UGGT1Q9NYU2 1555 aa21.39■■□□□ 1.01
CLPTM1-202ENST00000541297 ABCC3O15438 1527 aa21.37■■□□□ 1.01
CLPTM1-202ENST00000541297 SPATA31E1Q6ZUB1 1445 aa21.35■■□□□ 1.01
CLPTM1-202ENST00000541297 CAMSAP1Q5T5Y3 1602 aa21.35■■□□□ 1.01
CLPTM1-202ENST00000541297 NPATQ14207 1427 aa21.35■■□□□ 1.01
CLPTM1-202ENST00000541297 RALGAPBQ86X10 1494 aa21.34■■□□□ 1.01
CLPTM1-202ENST00000541297 PRAG1Q86YV5 1406 aa21.33■■□□□ 1
CLPTM1-202ENST00000541297 SIGLEC1Q9BZZ2 1709 aa21.32■■□□□ 1
CLPTM1-202ENST00000541297 TSHZ2Q9NRE2 1034 aa21.32■■□□□ 1
CLPTM1-202ENST00000541297 TRHP20396 242 aaPredicted RBP21.31■■□□□ 1
CLPTM1-202ENST00000541297 KIF1BO60333 1816 aa21.31■■□□□ 1
CLPTM1-202ENST00000541297 CARD11Q9BXL7 1154 aa21.31■■□□□ 1
CLPTM1-202ENST00000541297 TRPM1Q7Z4N2 1603 aa21.31■■□□□ 1
CLPTM1-202ENST00000541297 USP47Q96K76 1375 aa21.3■■□□□ 1
CLPTM1-202ENST00000541297 WASHC2AQ641Q2 1341 aa21.29■■□□□ 1
CLPTM1-202ENST00000541297 ROCK2O75116 1388 aaKnown RBP21.29■■□□□ 1
CLPTM1-202ENST00000541297 ZC3H13Q5T200 1668 aaKnown RBP21.28■■□□□ 1
CLPTM1-202ENST00000541297 C11orf95C9JLR9 678 aaPredicted RBP21.28■■□□□ 1
CLPTM1-202ENST00000541297 ARHGEF40Q8TER5 1519 aa21.27■■□□□ 1
CLPTM1-202ENST00000541297 MROH2AA6NES4 1674 aa21.27■□□□□ 0.99
CLPTM1-202ENST00000541297 NBPF1Q3BBV0 1214 aa21.26■□□□□ 0.99
CLPTM1-202ENST00000541297 REREQ9P2R6 1566 aa21.26■□□□□ 0.99
CLPTM1-202ENST00000541297 MLECQ14165 292 aa21.26■□□□□ 0.99
CLPTM1-202ENST00000541297 CHGAP10645 457 aaKnown RBP21.25■□□□□ 0.99
CLPTM1-202ENST00000541297 CNTLNQ9NXG0 1405 aa21.22■□□□□ 0.99
CLPTM1-202ENST00000541297 MADDQ8WXG6 1647 aa21.22■□□□□ 0.99
CLPTM1-202ENST00000541297 AGLP35573 1532 aa21.22■□□□□ 0.99
CLPTM1-202ENST00000541297 POLR1AO95602 1720 aaPredicted RBP21.21■□□□□ 0.99
CLPTM1-202ENST00000541297 SYNMO15061 1565 aa21.2■□□□□ 0.98
CLPTM1-202ENST00000541297 CLTCQ00610 1675 aaKnown RBP21.19■□□□□ 0.98
CLPTM1-202ENST00000541297 CCDC7Q96M83 1385 aa21.19■□□□□ 0.98
CLPTM1-202ENST00000541297 NOS1P29475 1434 aa21.19■□□□□ 0.98
CLPTM1-202ENST00000541297 DNAJC5Q9H3Z4 198 aa21.19■□□□□ 0.98
CLPTM1-202ENST00000541297 ST20-MTHFSA0A0A6YYL1 179 aa21.19■□□□□ 0.98
CLPTM1-202ENST00000541297 ARHGAP31Q2M1Z3 1444 aa21.18■□□□□ 0.98
CLPTM1-202ENST00000541297 NEURL4Q96JN8 1562 aa21.18■□□□□ 0.98
CLPTM1-202ENST00000541297 KIF7Q2M1P5 1343 aa21.17■□□□□ 0.98
CLPTM1-202ENST00000541297 PREX1Q8TCU6 1659 aa21.17■□□□□ 0.98
CLPTM1-202ENST00000541297 IFT172Q9UG01 1749 aa21.17■□□□□ 0.98
CLPTM1-202ENST00000541297 ADGRB3O60242 1522 aa21.17■□□□□ 0.98
CLPTM1-202ENST00000541297 POLR3GLQ9BT43 218 aa21.16■□□□□ 0.98
CLPTM1-202ENST00000541297 FBXO31Q5XUX0 539 aaPredicted RBP21.15■□□□□ 0.98
CLPTM1-202ENST00000541297 PIK3C2BO00750 1634 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms