RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 L3MBTL2Q969R5 705 aa13.4□□□□□ -0.26
CNOT4-212ENST00000541284 KIAA1210Q9ULL0 1709 aa13.39□□□□□ -0.27
CNOT4-212ENST00000541284 FOXD1Q16676 465 aa13.39□□□□□ -0.27
CNOT4-212ENST00000541284 NBPF8Q3BBV2 869 aa13.38□□□□□ -0.27
CNOT4-212ENST00000541284 LMTK2Q8IWU2 1503 aa13.38□□□□□ -0.27
CNOT4-212ENST00000541284 IQGAP1P46940 1657 aa13.38□□□□□ -0.27
CNOT4-212ENST00000541284 ARHGAP5Q13017 1502 aa13.38□□□□□ -0.27
CNOT4-212ENST00000541284 CCDC184Q52MB2 194 aa13.37□□□□□ -0.27
CNOT4-212ENST00000541284 CCDC7Q96M83 1385 aa13.37□□□□□ -0.27
CNOT4-212ENST00000541284 ANKRD50Q9ULJ7 1429 aa13.36□□□□□ -0.27
CNOT4-212ENST00000541284 ARID3CA6NKF2 412 aa13.36□□□□□ -0.27
CNOT4-212ENST00000541284 PIK3C2BO00750 1634 aa13.35□□□□□ -0.27
CNOT4-212ENST00000541284 TRPM2O94759 1503 aa13.35□□□□□ -0.27
CNOT4-212ENST00000541284 ABCA6Q8N139 1617 aa13.35□□□□□ -0.27
CNOT4-212ENST00000541284 ATP7AQ04656 1500 aa13.35□□□□□ -0.27
CNOT4-212ENST00000541284 MADDQ8WXG6 1647 aa13.35□□□□□ -0.27
CNOT4-212ENST00000541284 CDK11AQ9UQ88 783 aaPredicted RBP13.34□□□□□ -0.27
CNOT4-212ENST00000541284 EIF4G2P78344 907 aaKnown RBP eCLIP13.34□□□□□ -0.27
CNOT4-212ENST00000541284 SIGLEC1Q9BZZ2 1709 aa13.33□□□□□ -0.28
CNOT4-212ENST00000541284 MROH2AA6NES4 1674 aa13.33□□□□□ -0.28
CNOT4-212ENST00000541284 RIMBP3CA6NJZ7 1639 aa13.33□□□□□ -0.28
CNOT4-212ENST00000541284 RIMBP3BA6NNM3 1639 aa13.33□□□□□ -0.28
CNOT4-212ENST00000541284 RIMBP3Q9UFD9 1639 aa13.33□□□□□ -0.28
CNOT4-212ENST00000541284 RALGAPBQ86X10 1494 aa13.33□□□□□ -0.28
CNOT4-212ENST00000541284 KIF13AQ9H1H9 1805 aa13.33□□□□□ -0.28
CNOT4-212ENST00000541284 ANKRD30AQ9BXX3 1397 aa13.32□□□□□ -0.28
CNOT4-212ENST00000541284 CLTCL1P53675 1640 aa13.32□□□□□ -0.28
CNOT4-212ENST00000541284 ZC3H13Q5T200 1668 aaKnown RBP13.32□□□□□ -0.28
CNOT4-212ENST00000541284 HECW2Q9P2P5 1572 aa13.31□□□□□ -0.28
CNOT4-212ENST00000541284 ZMYM4Q5VZL5 1548 aa13.31□□□□□ -0.28
CNOT4-212ENST00000541284 REREQ9P2R6 1566 aa13.31□□□□□ -0.28
CNOT4-212ENST00000541284 TRAPPC8Q9Y2L5 1435 aa13.3□□□□□ -0.28
CNOT4-212ENST00000541284 MYO3AQ8NEV4 1616 aa13.3□□□□□ -0.28
CNOT4-212ENST00000541284 PTPRTO14522 1441 aa13.3□□□□□ -0.28
CNOT4-212ENST00000541284 PRKRIP1Q9H875 184 aaPredicted RBP13.29□□□□□ -0.28
CNOT4-212ENST00000541284 KIF7Q2M1P5 1343 aa13.29□□□□□ -0.28
CNOT4-212ENST00000541284 ZNF518AQ6AHZ1 1483 aa13.29□□□□□ -0.28
CNOT4-212ENST00000541284 EFCAB6Q5THR3 1501 aa13.29□□□□□ -0.28
CNOT4-212ENST00000541284 DIP2BQ9P265 1576 aa13.28□□□□□ -0.28
CNOT4-212ENST00000541284 HNRNPUQ00839 825 aaKnown RBP eCLIP13.28□□□□□ -0.28
CNOT4-212ENST00000541284 ASXL2Q76L83 1435 aa13.28□□□□□ -0.28
CNOT4-212ENST00000541284 DHX29Q7Z478 1369 aaKnown RBP13.27□□□□□ -0.28
CNOT4-212ENST00000541284 PPLO60437 1756 aa13.27□□□□□ -0.28
CNOT4-212ENST00000541284 KIF15Q9NS87 1388 aa13.27□□□□□ -0.28
CNOT4-212ENST00000541284 MYOM1P52179 1685 aa13.27□□□□□ -0.29
CNOT4-212ENST00000541284 RBM19Q9Y4C8 960 aaKnown RBP13.26□□□□□ -0.29
CNOT4-212ENST00000541284 DIP2CQ9Y2E4 1556 aa13.26□□□□□ -0.29
CNOT4-212ENST00000541284 NEFLP07196 543 aa13.26□□□□□ -0.29
CNOT4-212ENST00000541284 CFDP1Q9UEE9 299 aaPredicted RBP13.26□□□□□ -0.29
CNOT4-212ENST00000541284 RSPH4AQ5TD94 716 aa13.25□□□□□ -0.29
CNOT4-212ENST00000541284 ANP32EQ9BTT0 268 aa13.25□□□□□ -0.29
CNOT4-212ENST00000541284 NRXN1Q9ULB1 1477 aa13.25□□□□□ -0.29
CNOT4-212ENST00000541284 MLH3Q9UHC1 1453 aa13.24□□□□□ -0.29
CNOT4-212ENST00000541284 PLEKHD1A6NEE1 506 aa13.24□□□□□ -0.29
CNOT4-212ENST00000541284 SLC4A1APQ9BWU0 796 aaKnown RBP13.24□□□□□ -0.29
CNOT4-212ENST00000541284 FANCAO15360 1455 aa13.24□□□□□ -0.29
CNOT4-212ENST00000541284 CAMSAP1Q5T5Y3 1602 aa13.24□□□□□ -0.29
CNOT4-212ENST00000541284 FBLN2P98095 1184 aa13.23□□□□□ -0.29
CNOT4-212ENST00000541284 A2MP01023 1474 aa13.22□□□□□ -0.29
CNOT4-212ENST00000541284 GPRASP1Q5JY77 1395 aa13.22□□□□□ -0.29
CNOT4-212ENST00000541284 KIF1BO60333 1816 aa13.22□□□□□ -0.29
CNOT4-212ENST00000541284 POGZQ7Z3K3 1410 aa13.21□□□□□ -0.29
CNOT4-212ENST00000541284 NEO1Q92859 1461 aa13.21□□□□□ -0.3
CNOT4-212ENST00000541284 ZBED9Q6R2W3 1325 aa13.2□□□□□ -0.3
CNOT4-212ENST00000541284 ADGRB3O60242 1522 aa13.2□□□□□ -0.3
CNOT4-212ENST00000541284 IRX6P78412 446 aaPredicted RBP13.19□□□□□ -0.3
CNOT4-212ENST00000541284 PRAG1Q86YV5 1406 aa13.18□□□□□ -0.3
CNOT4-212ENST00000541284 USP47Q96K76 1375 aa13.18□□□□□ -0.3
CNOT4-212ENST00000541284 SETD1AO15047 1707 aaKnown RBP13.18□□□□□ -0.3
CNOT4-212ENST00000541284 MSH5O43196 834 aa13.17□□□□□ -0.3
CNOT4-212ENST00000541284 SYNMO15061 1565 aa13.16□□□□□ -0.3
CNOT4-212ENST00000541284 ERICH6BQ5W0A0 696 aa13.16□□□□□ -0.3
CNOT4-212ENST00000541284 PKD2Q13563 968 aa13.15□□□□□ -0.3
CNOT4-212ENST00000541284 MRS2Q9HD23 443 aa13.15□□□□□ -0.3
CNOT4-212ENST00000541284 ADGRL1O94910 1474 aa13.15□□□□□ -0.3
CNOT4-212ENST00000541284 MYOM2P54296 1465 aa13.15□□□□□ -0.3
CNOT4-212ENST00000541284 SETBP1Q9Y6X0 1596 aa13.14□□□□□ -0.31
CNOT4-212ENST00000541284 FAM9BQ8IZU0 186 aa13.14□□□□□ -0.31
CNOT4-212ENST00000541284 MYO5BQ9ULV0 1848 aa13.13□□□□□ -0.31
CNOT4-212ENST00000541284 SMG6Q86US8 1419 aaKnown RBP13.12□□□□□ -0.31
CNOT4-212ENST00000541284 PREX1Q8TCU6 1659 aa13.12□□□□□ -0.31
CNOT4-212ENST00000541284 ABCC3O15438 1527 aa13.12□□□□□ -0.31
CNOT4-212ENST00000541284 HNRNPMP52272 730 aaKnown RBP eCLIP13.12□□□□□ -0.31
CNOT4-212ENST00000541284 ARID4BQ4LE39 1312 aaPredicted RBP13.11□□□□□ -0.31
CNOT4-212ENST00000541284 RNF123Q5XPI4 1314 aa13.11□□□□□ -0.31
CNOT4-212ENST00000541284 KDM5AP29375 1690 aaKnown RBP13.11□□□□□ -0.31
CNOT4-212ENST00000541284 PPP4R2Q9NY27 417 aa13.1□□□□□ -0.31
CNOT4-212ENST00000541284 ZNF777Q9ULD5 760 aaPredicted RBP13.1□□□□□ -0.31
CNOT4-212ENST00000541284 FANCIQ9NVI1 1328 aa13.1□□□□□ -0.31
CNOT4-212ENST00000541284 NUP155O75694 1391 aa13.09□□□□□ -0.31
CNOT4-212ENST00000541284 SCAPERQ9BY12 1400 aa13.09□□□□□ -0.31
CNOT4-212ENST00000541284 AGLP35573 1532 aa13.08□□□□□ -0.32
CNOT4-212ENST00000541284 LRPPRCP42704 1394 aaKnown RBP13.07□□□□□ -0.32
CNOT4-212ENST00000541284 ADGRB1O14514 1584 aa13.07□□□□□ -0.32
CNOT4-212ENST00000541284 ARHGEF28Q8N1W1 1705 aaKnown RBP13.06□□□□□ -0.32
CNOT4-212ENST00000541284 TMEM131LA2VDJ0 1609 aa13.06□□□□□ -0.32
CNOT4-212ENST00000541284 COL17A1Q9UMD9 1497 aaPredicted RBP13.06□□□□□ -0.32
CNOT4-212ENST00000541284 PNISRQ8TF01 805 aaKnown RBP13.05□□□□□ -0.32
CNOT4-212ENST00000541284 ARHGAP31Q2M1Z3 1444 aa13.05□□□□□ -0.32
CNOT4-212ENST00000541284 CLTCQ00610 1675 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms