RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 SCAPERQ9BY12 1400 aa22.96■■□□□ 1.27
EPB41L3-204ENST00000540638 RBM19Q9Y4C8 960 aaKnown RBP22.95■■□□□ 1.26
EPB41L3-204ENST00000540638 FAM135AQ9P2D6 1515 aa22.94■■□□□ 1.26
EPB41L3-204ENST00000540638 SAMD9LQ8IVG5 1584 aa22.94■■□□□ 1.26
EPB41L3-204ENST00000540638 ADGBQ8N7X0 1667 aa22.93■■□□□ 1.26
EPB41L3-204ENST00000540638 TTC37Q6PGP7 1564 aa22.93■■□□□ 1.26
EPB41L3-204ENST00000540638 CCDC136Q96JN2 1154 aa22.92■■□□□ 1.26
EPB41L3-204ENST00000540638 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.92■■□□□ 1.26
EPB41L3-204ENST00000540638 KNSTRNQ9Y448 316 aa22.92■■□□□ 1.26
EPB41L3-204ENST00000540638 ERICH6Q7L0X2 663 aa22.92■■□□□ 1.26
EPB41L3-204ENST00000540638 PPP4R2Q9NY27 417 aa22.91■■□□□ 1.26
EPB41L3-204ENST00000540638 KTN1Q86UP2 1357 aaKnown RBP22.9■■□□□ 1.26
EPB41L3-204ENST00000540638 SHANK2Q9UPX8 1470 aa22.9■■□□□ 1.26
EPB41L3-204ENST00000540638 OSCARQ8IYS5 282 aa22.9■■□□□ 1.26
EPB41L3-204ENST00000540638 TNNT2P45379 298 aaPredicted RBP22.9■■□□□ 1.26
EPB41L3-204ENST00000540638 PNISRQ8TF01 805 aaKnown RBP22.89■■□□□ 1.26
EPB41L3-204ENST00000540638 ABCC2Q92887 1545 aa22.88■■□□□ 1.25
EPB41L3-204ENST00000540638 KANK1Q14678 1352 aa22.88■■□□□ 1.25
EPB41L3-204ENST00000540638 MYBBP1AQ9BQG0 1328 aaKnown RBP22.88■■□□□ 1.25
EPB41L3-204ENST00000540638 ADCY10Q96PN6 1610 aa22.88■■□□□ 1.25
EPB41L3-204ENST00000540638 DHX29Q7Z478 1369 aaKnown RBP22.88■■□□□ 1.25
EPB41L3-204ENST00000540638 SAFB2Q14151 953 aaKnown RBP eCLIP22.87■■□□□ 1.25
EPB41L3-204ENST00000540638 PLCH2O75038 1416 aa22.87■■□□□ 1.25
EPB41L3-204ENST00000540638 RALBP1Q15311 655 aa22.86■■□□□ 1.25
EPB41L3-204ENST00000540638 CFAP70Q5T0N1 1121 aa22.86■■□□□ 1.25
EPB41L3-204ENST00000540638 NUDCQ9Y266 331 aa22.85■■□□□ 1.25
EPB41L3-204ENST00000540638 ARHGEF12Q9NZN5 1544 aa22.85■■□□□ 1.25
EPB41L3-204ENST00000540638 NLRP13Q86W25 1043 aa22.84■■□□□ 1.25
EPB41L3-204ENST00000540638 RALGAPBQ86X10 1494 aa22.83■■□□□ 1.24
EPB41L3-204ENST00000540638 WDR43Q15061 677 aaKnown RBP eCLIP22.83■■□□□ 1.24
EPB41L3-204ENST00000540638 CYB5RLQ6IPT4 315 aa22.83■■□□□ 1.24
EPB41L3-204ENST00000540638 DISP3Q9P2K9 1392 aa22.82■■□□□ 1.24
EPB41L3-204ENST00000540638 RAPGEF3O95398 923 aa22.82■■□□□ 1.24
EPB41L3-204ENST00000540638 CDC42BPBQ9Y5S2 1711 aa22.81■■□□□ 1.24
EPB41L3-204ENST00000540638 TRAK1Q9UPV9 953 aa22.81■■□□□ 1.24
EPB41L3-204ENST00000540638 CDCA7LQ96GN5 454 aa22.8■■□□□ 1.24
EPB41L3-204ENST00000540638 ARID4BQ4LE39 1312 aaPredicted RBP22.8■■□□□ 1.24
EPB41L3-204ENST00000540638 CROCC2H7BZ55 1655 aa22.8■■□□□ 1.24
EPB41L3-204ENST00000540638 PRAG1Q86YV5 1406 aa22.79■■□□□ 1.24
EPB41L3-204ENST00000540638 BCORL1Q5H9F3 1711 aa22.78■■□□□ 1.24
EPB41L3-204ENST00000540638 WASHC2CQ9Y4E1 1318 aa22.77■■□□□ 1.24
EPB41L3-204ENST00000540638 TMEM132EQ6IEE7 984 aa22.76■■□□□ 1.23
EPB41L3-204ENST00000540638 PREX2Q70Z35 1606 aa22.76■■□□□ 1.23
EPB41L3-204ENST00000540638 PLA2R1Q13018 1463 aa22.76■■□□□ 1.23
EPB41L3-204ENST00000540638 FANCAO15360 1455 aa22.76■■□□□ 1.23
EPB41L3-204ENST00000540638 A2MP01023 1474 aa22.76■■□□□ 1.23
EPB41L3-204ENST00000540638 PLIN1O60240 522 aa22.75■■□□□ 1.23
EPB41L3-204ENST00000540638 CCDC146Q8IYE0 955 aa22.75■■□□□ 1.23
EPB41L3-204ENST00000540638 TESK2Q96S53 571 aa22.75■■□□□ 1.23
EPB41L3-204ENST00000540638 ARHGEF5Q12774 1597 aa22.75■■□□□ 1.23
EPB41L3-204ENST00000540638 UHRF1BP1Q6BDS2 1440 aa22.74■■□□□ 1.23
EPB41L3-204ENST00000540638 NEUROD2Q15784 382 aa22.73■■□□□ 1.23
EPB41L3-204ENST00000540638 STK26Q9P289 416 aa22.73■■□□□ 1.23
EPB41L3-204ENST00000540638 MLECQ14165 292 aa22.72■■□□□ 1.23
EPB41L3-204ENST00000540638 PLPPR3Q6T4P5 718 aa22.72■■□□□ 1.23
EPB41L3-204ENST00000540638 ADGRL1O94910 1474 aa22.72■■□□□ 1.23
EPB41L3-204ENST00000540638 ERBINQ96RT1 1412 aa22.71■■□□□ 1.23
EPB41L3-204ENST00000540638 STAG3Q9UJ98 1225 aa22.7■■□□□ 1.23
EPB41L3-204ENST00000540638 KDM5CP41229 1560 aa22.7■■□□□ 1.23
EPB41L3-204ENST00000540638 ADGRF5Q8IZF2 1346 aa22.7■■□□□ 1.22
EPB41L3-204ENST00000540638 RCAN3Q9UKA8 241 aa22.7■■□□□ 1.22
EPB41L3-204ENST00000540638 DUOX2Q9NRD8 1548 aa22.69■■□□□ 1.22
EPB41L3-204ENST00000540638 CDCA8Q53HL2 280 aa22.69■■□□□ 1.22
EPB41L3-204ENST00000540638 NPM2Q86SE8 214 aaKnown RBP22.69■■□□□ 1.22
EPB41L3-204ENST00000540638 ASXL2Q76L83 1435 aa22.69■■□□□ 1.22
EPB41L3-204ENST00000540638 ADAMTS8Q9UP79 889 aa22.68■■□□□ 1.22
EPB41L3-204ENST00000540638 MYO5CQ9NQX4 1742 aa22.68■■□□□ 1.22
EPB41L3-204ENST00000540638 ZCCHC11Q5TAX3 1644 aaKnown RBP22.67■■□□□ 1.22
EPB41L3-204ENST00000540638 BRD4O60885 1362 aaPredicted RBP22.67■■□□□ 1.22
EPB41L3-204ENST00000540638 PER1O15534 1290 aaPredicted RBP22.66■■□□□ 1.22
EPB41L3-204ENST00000540638 EXOC6Q8TAG9 804 aa22.66■■□□□ 1.22
EPB41L3-204ENST00000540638 WDR7Q9Y4E6 1490 aa22.65■■□□□ 1.22
EPB41L3-204ENST00000540638 CFAP65Q6ZU64 1925 aaKnown RBP22.6■■□□□ 1.21
EPB41L3-204ENST00000540638 PPP2R1AP30153 589 aa22.59■■□□□ 1.21
EPB41L3-204ENST00000540638 KDM5DQ9BY66 1539 aa22.59■■□□□ 1.21
EPB41L3-204ENST00000540638 CD109Q6YHK3 1445 aa22.59■■□□□ 1.21
EPB41L3-204ENST00000540638 RRP1P56182 461 aaKnown RBP22.57■■□□□ 1.2
EPB41L3-204ENST00000540638 SMG6Q86US8 1419 aaKnown RBP22.57■■□□□ 1.2
EPB41L3-204ENST00000540638 ERICH6BQ5W0A0 696 aa22.56■■□□□ 1.2
EPB41L3-204ENST00000540638 SLC12A5Q9H2X9 1139 aa22.56■■□□□ 1.2
EPB41L3-204ENST00000540638 ANP32EQ9BTT0 268 aa22.55■■□□□ 1.2
EPB41L3-204ENST00000540638 ABCC1P33527 1531 aa22.55■■□□□ 1.2
EPB41L3-204ENST00000540638 SHROOM2Q13796 1616 aa22.55■■□□□ 1.2
EPB41L3-204ENST00000540638 UGGT1Q9NYU2 1555 aa22.54■■□□□ 1.2
EPB41L3-204ENST00000540638 APAF1O14727 1248 aa22.54■■□□□ 1.2
EPB41L3-204ENST00000540638 MORC1Q86VD1 984 aa22.54■■□□□ 1.2
EPB41L3-204ENST00000540638 RRP7AQ9Y3A4 280 aaKnown RBP22.54■■□□□ 1.2
EPB41L3-204ENST00000540638 EIF3AQ14152 1382 aaKnown RBP22.54■■□□□ 1.2
EPB41L3-204ENST00000540638 MAST1Q9Y2H9 1570 aa22.52■■□□□ 1.2
EPB41L3-204ENST00000540638 CANXP27824 592 aaKnown RBP22.52■■□□□ 1.2
EPB41L3-204ENST00000540638 SRPK2P78362 688 aaKnown RBP22.52■■□□□ 1.2
EPB41L3-204ENST00000540638 SKAP1Q86WV1 359 aa22.52■■□□□ 1.19
EPB41L3-204ENST00000540638 FAM69CQ0P6D2 419 aa22.51■■□□□ 1.19
EPB41L3-204ENST00000540638 PARD3Q8TEW0 1356 aa22.5■■□□□ 1.19
EPB41L3-204ENST00000540638 CENPJQ9HC77 1338 aaPredicted RBP22.5■■□□□ 1.19
EPB41L3-204ENST00000540638 CLASP1Q7Z460 1538 aa22.49■■□□□ 1.19
EPB41L3-204ENST00000540638 ATP10AO60312 1499 aa22.49■■□□□ 1.19
EPB41L3-204ENST00000540638 UHRF1BP1LA0JNW5 1464 aa22.49■■□□□ 1.19
EPB41L3-204ENST00000540638 ATP7AQ04656 1500 aa22.48■■□□□ 1.19
EPB41L3-204ENST00000540638 POGKQ9P215 609 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms