RNA–Protein interactions for RNA: ENST00000540479.5

CALML4-208, Transcript of calmodulin like 4, human

TSL 1 (best) BASIC

Gene CALML4, Length 4,603 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALML4-208	ENST00000540479	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.55	□□□□□ -0.56
CALML4-208	ENST00000540479	KIAA2012	Q0VF49	1180 aa		11.54	□□□□□ -0.56
CALML4-208	ENST00000540479	EFCAB2	Q5VUJ9	269 aa		11.53	□□□□□ -0.56
CALML4-208	ENST00000540479	TOP2B	Q02880	1626 aa		11.53	□□□□□ -0.56
CALML4-208	ENST00000540479	GOLGA6L4	A6NEF3	574 aa		11.53	□□□□□ -0.56
CALML4-208	ENST00000540479	MSH5	O43196	834 aa		11.53	□□□□□ -0.56
CALML4-208	ENST00000540479	FYCO1	Q9BQS8	1478 aa		11.53	□□□□□ -0.56
CALML4-208	ENST00000540479	COG6	Q9Y2V7	657 aa		11.53	□□□□□ -0.56
CALML4-208	ENST00000540479	SYAP1	Q96A49	352 aa	Predicted RBP	11.53	□□□□□ -0.56
CALML4-208	ENST00000540479	APAF1	O14727	1248 aa		11.52	□□□□□ -0.57
CALML4-208	ENST00000540479	NCOA2	Q15596	1464 aa		11.52	□□□□□ -0.57
CALML4-208	ENST00000540479	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.52	□□□□□ -0.57
CALML4-208	ENST00000540479	SMG6	Q86US8	1419 aa	Known RBP	11.52	□□□□□ -0.57
CALML4-208	ENST00000540479	MIA2	Q96PC5	1412 aa		11.52	□□□□□ -0.57
CALML4-208	ENST00000540479	GOLGA6L6	A8MZA4	724 aa		11.52	□□□□□ -0.57
CALML4-208	ENST00000540479	C14orf37	Q86TY3	774 aa		11.51	□□□□□ -0.57
CALML4-208	ENST00000540479	AKNA	Q7Z591	1439 aa		11.51	□□□□□ -0.57
CALML4-208	ENST00000540479	CFTR	P13569	1480 aa		11.51	□□□□□ -0.57
CALML4-208	ENST00000540479	KCNJ4	P48050	445 aa		11.51	□□□□□ -0.57
CALML4-208	ENST00000540479	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.51	□□□□□ -0.57
CALML4-208	ENST00000540479	NRDC	O43847	1150 aa		11.51	□□□□□ -0.57
CALML4-208	ENST00000540479	SAFB2	Q14151	953 aa	Known RBP eCLIP	11.51	□□□□□ -0.57
CALML4-208	ENST00000540479	HFM1	A2PYH4	1435 aa		11.51	□□□□□ -0.57
CALML4-208	ENST00000540479	BACH2	Q9BYV9	841 aa		11.5	□□□□□ -0.57
CALML4-208	ENST00000540479	GAPVD1	Q14C86	1478 aa		11.5	□□□□□ -0.57
CALML4-208	ENST00000540479	OS9	Q13438	667 aa	Predicted RBP	11.5	□□□□□ -0.57
CALML4-208	ENST00000540479	CHMP5	Q9NZZ3	219 aa		11.5	□□□□□ -0.57
CALML4-208	ENST00000540479	ZKSCAN2	Q63HK3	967 aa		11.5	□□□□□ -0.57
CALML4-208	ENST00000540479	APBB1	O00213	710 aa		11.49	□□□□□ -0.57
CALML4-208	ENST00000540479	CCDC184	Q52MB2	194 aa		11.49	□□□□□ -0.57
CALML4-208	ENST00000540479	PNISR	Q8TF01	805 aa	Known RBP	11.49	□□□□□ -0.57
CALML4-208	ENST00000540479	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
CALML4-208	ENST00000540479	RRP7A	Q9Y3A4	280 aa	Known RBP	11.49	□□□□□ -0.57
CALML4-208	ENST00000540479	TIAM1	Q13009	1591 aa		11.49	□□□□□ -0.57
CALML4-208	ENST00000540479	EFCAB5	A4FU69	1503 aa		11.48	□□□□□ -0.57
CALML4-208	ENST00000540479	BCL2L13	Q9BXK5	485 aa		11.48	□□□□□ -0.57
CALML4-208	ENST00000540479	FOXD4L1	Q9NU39	408 aa		11.48	□□□□□ -0.57
CALML4-208	ENST00000540479	AAMP	Q13685	434 aa		11.48	□□□□□ -0.57
CALML4-208	ENST00000540479	JPH4	Q96JJ6	628 aa		11.48	□□□□□ -0.57
CALML4-208	ENST00000540479	FGD1	P98174	961 aa		11.47	□□□□□ -0.57
CALML4-208	ENST00000540479	IL27	Q8NEV9	243 aa		11.47	□□□□□ -0.57
CALML4-208	ENST00000540479	CDCA7L	Q96GN5	454 aa		11.47	□□□□□ -0.57
CALML4-208	ENST00000540479	DDX49	Q9Y6V7	483 aa	Known RBP	11.47	□□□□□ -0.57
CALML4-208	ENST00000540479	NBPF8	Q3BBV2	869 aa		11.47	□□□□□ -0.57
CALML4-208	ENST00000540479	ST18	O60284	1047 aa		11.46	□□□□□ -0.57
CALML4-208	ENST00000540479	DRC7	Q8IY82	874 aa		11.46	□□□□□ -0.57
CALML4-208	ENST00000540479	RAD54L2	Q9Y4B4	1467 aa		11.46	□□□□□ -0.57
CALML4-208	ENST00000540479	ZNF644	Q9H582	1327 aa	Predicted RBP	11.46	□□□□□ -0.57
CALML4-208	ENST00000540479	ZBTB7C	A1YPR0	619 aa		11.46	□□□□□ -0.58
CALML4-208	ENST00000540479	CDK11B	P21127	795 aa	Known RBP	11.46	□□□□□ -0.58
CALML4-208	ENST00000540479	KIAA1211	Q6ZU35	1233 aa		11.46	□□□□□ -0.58
CALML4-208	ENST00000540479	STK26	Q9P289	416 aa		11.46	□□□□□ -0.58
CALML4-208	ENST00000540479	WASHC2C	Q9Y4E1	1318 aa		11.45	□□□□□ -0.58
CALML4-208	ENST00000540479	PLEKHG5	O94827	1062 aa		11.45	□□□□□ -0.58
CALML4-208	ENST00000540479	TERF2IP	Q9NYB0	399 aa		11.45	□□□□□ -0.58
CALML4-208	ENST00000540479	VSIG10	Q8N0Z9	540 aa		11.45	□□□□□ -0.58
CALML4-208	ENST00000540479	BRPF3	Q9ULD4	1205 aa		11.45	□□□□□ -0.58
CALML4-208	ENST00000540479	GGT6	Q6P531	493 aa		11.45	□□□□□ -0.58
CALML4-208	ENST00000540479	PHF23	Q9BUL5	403 aa	Predicted RBP	11.45	□□□□□ -0.58
CALML4-208	ENST00000540479	KIF3B	O15066	747 aa		11.45	□□□□□ -0.58
CALML4-208	ENST00000540479	HMMR	O75330	724 aa		11.45	□□□□□ -0.58
CALML4-208	ENST00000540479	DDX19B	Q9UMR2	479 aa		11.44	□□□□□ -0.58
CALML4-208	ENST00000540479	RTF1	Q92541	710 aa	Known RBP	11.44	□□□□□ -0.58
CALML4-208	ENST00000540479	ADAMTS8	Q9UP79	889 aa		11.44	□□□□□ -0.58
CALML4-208	ENST00000540479	SPAG9	O60271	1321 aa	Known RBP	11.43	□□□□□ -0.58
CALML4-208	ENST00000540479	FRAT2	O75474	233 aa	Predicted RBP	11.43	□□□□□ -0.58
CALML4-208	ENST00000540479	ARID3A	Q99856	593 aa		11.43	□□□□□ -0.58
CALML4-208	ENST00000540479	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.43	□□□□□ -0.58
CALML4-208	ENST00000540479	ANKRD50	Q9ULJ7	1429 aa		11.43	□□□□□ -0.58
CALML4-208	ENST00000540479	HMGXB3	Q12766	1538 aa		11.43	□□□□□ -0.58
CALML4-208	ENST00000540479	PHF14	O94880	888 aa		11.42	□□□□□ -0.58
CALML4-208	ENST00000540479	ANKRD45	Q5TZF3	282 aa		11.42	□□□□□ -0.58
CALML4-208	ENST00000540479	DZIP1L	Q8IYY4	767 aa	Known RBP	11.42	□□□□□ -0.58
CALML4-208	ENST00000540479	MRE11	P49959	708 aa		11.42	□□□□□ -0.58
CALML4-208	ENST00000540479	LMOD3	Q0VAK6	560 aa		11.42	□□□□□ -0.58
CALML4-208	ENST00000540479		A0A0G2JS52	829 aa		11.41	□□□□□ -0.58
CALML4-208	ENST00000540479	C22orf23	Q9BZE7	217 aa		11.41	□□□□□ -0.58
CALML4-208	ENST00000540479	MAP3K1	Q13233	1512 aa		11.41	□□□□□ -0.58
CALML4-208	ENST00000540479	STAC3	Q96MF2	364 aa		11.41	□□□□□ -0.58
CALML4-208	ENST00000540479	TRAK1	Q9UPV9	953 aa		11.41	□□□□□ -0.58
CALML4-208	ENST00000540479	FAM43A	Q8N2R8	423 aa		11.4	□□□□□ -0.58
CALML4-208	ENST00000540479	EHBP1L1	Q8N3D4	1523 aa		11.4	□□□□□ -0.58
CALML4-208	ENST00000540479	RUNDC1	Q96C34	613 aa		11.4	□□□□□ -0.58
CALML4-208	ENST00000540479	NAIP	Q13075	1403 aa		11.4	□□□□□ -0.58
CALML4-208	ENST00000540479	CSPP1	Q1MSJ5	1256 aa		11.39	□□□□□ -0.59
CALML4-208	ENST00000540479	PANK1	Q8TE04	598 aa		11.39	□□□□□ -0.59
CALML4-208	ENST00000540479	HDGF	P51858	240 aa	Known RBP	11.39	□□□□□ -0.59
CALML4-208	ENST00000540479	TRIM6-TRIM34	B2RNG4	842 aa		11.38	□□□□□ -0.59
CALML4-208	ENST00000540479	HTATSF1	O43719	755 aa	Known RBP	11.38	□□□□□ -0.59
CALML4-208	ENST00000540479	PDE3A	Q14432	1141 aa		11.38	□□□□□ -0.59
CALML4-208	ENST00000540479	STK31	Q9BXU1	1019 aa		11.38	□□□□□ -0.59
CALML4-208	ENST00000540479	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.38	□□□□□ -0.59
CALML4-208	ENST00000540479	MLEC	Q14165	292 aa		11.37	□□□□□ -0.59
CALML4-208	ENST00000540479	KIAA1107	Q9UPP5	1409 aa		11.37	□□□□□ -0.59
CALML4-208	ENST00000540479	SOX12	O15370	315 aa		11.37	□□□□□ -0.59
CALML4-208	ENST00000540479	TRAK2	O60296	914 aa		11.37	□□□□□ -0.59
CALML4-208	ENST00000540479	PPP2R1A	P30153	589 aa		11.37	□□□□□ -0.59
CALML4-208	ENST00000540479	PTPRG	P23470	1445 aa		11.36	□□□□□ -0.59
CALML4-208	ENST00000540479	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.36	□□□□□ -0.59
CALML4-208	ENST00000540479	CHMP4A	Q9BY43	222 aa		11.36	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms