RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 A2MP01023 1474 aa28.25■■■□□ 2.11
TNFRSF1A-213ENST00000540022 DHX29Q7Z478 1369 aaKnown RBP28.23■■■□□ 2.11
TNFRSF1A-213ENST00000540022 AGLP35573 1532 aa28.23■■■□□ 2.11
TNFRSF1A-213ENST00000540022 ERBINQ96RT1 1412 aa28.19■■■□□ 2.1
TNFRSF1A-213ENST00000540022 HRCP23327 699 aa28.18■■■□□ 2.1
TNFRSF1A-213ENST00000540022 KIF3BO15066 747 aa28.12■■■□□ 2.09
TNFRSF1A-213ENST00000540022 PLPPR3Q6T4P5 718 aa28.11■■■□□ 2.09
TNFRSF1A-213ENST00000540022 LMTK3Q96Q04 1460 aa28.08■■■□□ 2.09
TNFRSF1A-213ENST00000540022 GGT6Q6P531 493 aa28.07■■■□□ 2.08
TNFRSF1A-213ENST00000540022 TRIM52Q96A61 297 aa28.07■■■□□ 2.08
TNFRSF1A-213ENST00000540022 EIF2AK4Q9P2K8 1649 aaKnown RBP28.06■■■□□ 2.08
TNFRSF1A-213ENST00000540022 C3P01024 1663 aa28.05■■■□□ 2.08
TNFRSF1A-213ENST00000540022 SETD1BQ9UPS6 1966 aaKnown RBP28.04■■■□□ 2.08
TNFRSF1A-213ENST00000540022 CEBPAP49715 358 aaPredicted RBP28.03■■■□□ 2.08
TNFRSF1A-213ENST00000540022 ACIN1Q9UKV3 1341 aaKnown RBP28.03■■■□□ 2.08
TNFRSF1A-213ENST00000540022 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.02■■■□□ 2.08
TNFRSF1A-213ENST00000540022 NUP155O75694 1391 aa28.01■■■□□ 2.07
TNFRSF1A-213ENST00000540022 UNC13BO14795 1591 aa28.01■■■□□ 2.07
TNFRSF1A-213ENST00000540022 PREX1Q8TCU6 1659 aa27.99■■■□□ 2.07
TNFRSF1A-213ENST00000540022 MROH2AA6NES4 1674 aa27.98■■■□□ 2.07
TNFRSF1A-213ENST00000540022 DEPDC5O75140 1603 aa27.97■■■□□ 2.07
TNFRSF1A-213ENST00000540022 MROH1Q8NDA8 1641 aa27.97■■■□□ 2.07
TNFRSF1A-213ENST00000540022 RNF17Q9BXT8 1623 aaKnown RBP27.96■■■□□ 2.07
TNFRSF1A-213ENST00000540022 DHX57Q6P158 1386 aaKnown RBP27.96■■■□□ 2.07
TNFRSF1A-213ENST00000540022 CNTLNQ9NXG0 1405 aa27.96■■■□□ 2.07
TNFRSF1A-213ENST00000540022 KDM5DQ9BY66 1539 aa27.96■■■□□ 2.07
TNFRSF1A-213ENST00000540022 ESF1Q9H501 851 aaKnown RBP27.96■■■□□ 2.07
TNFRSF1A-213ENST00000540022 PZPP20742 1482 aa27.95■■■□□ 2.07
TNFRSF1A-213ENST00000540022 PRDM15P57071 1507 aaPredicted RBP27.95■■■□□ 2.06
TNFRSF1A-213ENST00000540022 CLTCQ00610 1675 aaKnown RBP27.94■■■□□ 2.06
TNFRSF1A-213ENST00000540022 MPHOSPH9Q99550 1183 aa27.93■■■□□ 2.06
TNFRSF1A-213ENST00000540022 SLC4A1APQ9BWU0 796 aaKnown RBP27.92■■■□□ 2.06
TNFRSF1A-213ENST00000540022 KANK1Q14678 1352 aa27.91■■■□□ 2.06
TNFRSF1A-213ENST00000540022 VWDEQ8N2E2 1590 aa27.91■■■□□ 2.06
TNFRSF1A-213ENST00000540022 FAM135AQ9P2D6 1515 aa27.9■■■□□ 2.06
TNFRSF1A-213ENST00000540022 HSPA2P54652 639 aa27.9■■■□□ 2.06
TNFRSF1A-213ENST00000540022 IQGAP3Q86VI3 1631 aa27.88■■■□□ 2.05
TNFRSF1A-213ENST00000540022 WASHC2CQ9Y4E1 1318 aa27.88■■■□□ 2.05
TNFRSF1A-213ENST00000540022 ZMYM3Q14202 1370 aa27.86■■■□□ 2.05
TNFRSF1A-213ENST00000540022 CCER1Q8TC90 406 aaPredicted RBP27.86■■■□□ 2.05
TNFRSF1A-213ENST00000540022 PPP6R1Q9UPN7 881 aa27.86■■■□□ 2.05
TNFRSF1A-213ENST00000540022 ABCC3O15438 1527 aa27.84■■■□□ 2.05
TNFRSF1A-213ENST00000540022 UHRF1BP1Q6BDS2 1440 aa27.84■■■□□ 2.05
TNFRSF1A-213ENST00000540022 PKD2Q13563 968 aa27.83■■■□□ 2.05
TNFRSF1A-213ENST00000540022 LMTK2Q8IWU2 1503 aa27.81■■■□□ 2.04
TNFRSF1A-213ENST00000540022 FOXD1Q16676 465 aa27.81■■■□□ 2.04
TNFRSF1A-213ENST00000540022 CEP152O94986 1710 aa27.8■■■□□ 2.04
TNFRSF1A-213ENST00000540022 NPATQ14207 1427 aa27.79■■■□□ 2.04
TNFRSF1A-213ENST00000540022 TET3O43151 1660 aa27.75■■■□□ 2.03
TNFRSF1A-213ENST00000540022 STRCQ7RTU9 1775 aa27.75■■■□□ 2.03
TNFRSF1A-213ENST00000540022 ZC3H13Q5T200 1668 aaKnown RBP27.74■■■□□ 2.03
TNFRSF1A-213ENST00000540022 EFCAB6Q5THR3 1501 aa27.73■■■□□ 2.03
TNFRSF1A-213ENST00000540022 FBXO31Q5XUX0 539 aaPredicted RBP27.72■■■□□ 2.03
TNFRSF1A-213ENST00000540022 CAMSAP1Q5T5Y3 1602 aa27.72■■■□□ 2.03
TNFRSF1A-213ENST00000540022 MYO3AQ8NEV4 1616 aa27.71■■■□□ 2.03
TNFRSF1A-213ENST00000540022 CLSPNQ9HAW4 1339 aa27.69■■■□□ 2.02
TNFRSF1A-213ENST00000540022 E9PCH4 1651 aa27.69■■■□□ 2.02
TNFRSF1A-213ENST00000540022 ANKRD30BQ9BXX2 1392 aa27.68■■■□□ 2.02
TNFRSF1A-213ENST00000540022 ZNF142P52746 1687 aaPredicted RBP27.68■■■□□ 2.02
TNFRSF1A-213ENST00000540022 ARHGAP31Q2M1Z3 1444 aa27.68■■■□□ 2.02
TNFRSF1A-213ENST00000540022 RPRD2Q5VT52 1461 aaKnown RBP27.65■■■□□ 2.02
TNFRSF1A-213ENST00000540022 PLA2R1Q13018 1463 aa27.64■■■□□ 2.02
TNFRSF1A-213ENST00000540022 CEP170BQ9Y4F5 1589 aaPredicted RBP27.63■■■□□ 2.01
TNFRSF1A-213ENST00000540022 SIN3AQ96ST3 1273 aa27.62■■■□□ 2.01
TNFRSF1A-213ENST00000540022 PTPRTO14522 1441 aa27.61■■■□□ 2.01
TNFRSF1A-213ENST00000540022 CFAP65Q6ZU64 1925 aaKnown RBP27.59■■■□□ 2.01
TNFRSF1A-213ENST00000540022 ERVK-7P63135 1459 aa27.59■■■□□ 2.01
TNFRSF1A-213ENST00000540022 NOS1P29475 1434 aa27.57■■■□□ 2
TNFRSF1A-213ENST00000540022 SPATA31D1Q6ZQQ2 1576 aa27.56■■■□□ 2
TNFRSF1A-213ENST00000540022 NEUROD1Q13562 356 aa27.55■■■□□ 2
TNFRSF1A-213ENST00000540022 TNRQ92752 1358 aa27.55■■■□□ 2
TNFRSF1A-213ENST00000540022 TRPM2O94759 1503 aa27.54■■■□□ 2
TNFRSF1A-213ENST00000540022 A2ML1A8K2U0 1454 aa27.53■■■□□ 2
TNFRSF1A-213ENST00000540022 ILDR1Q86SU0 546 aaPredicted RBP27.53■■■□□ 2
TNFRSF1A-213ENST00000540022 SPHKAPQ2M3C7 1700 aa27.52■■■□□ 2
TNFRSF1A-213ENST00000540022 DMRT2Q9Y5R5 561 aa27.52■■■□□ 2
TNFRSF1A-213ENST00000540022 CCDC144AA2RUR9 1427 aa27.52■■■□□ 2
TNFRSF1A-213ENST00000540022 SYNMO15061 1565 aa27.51■■□□□ 1.99
TNFRSF1A-213ENST00000540022 UGGT1Q9NYU2 1555 aa27.49■■□□□ 1.99
TNFRSF1A-213ENST00000540022 NLRP1Q9C000 1473 aa27.45■■□□□ 1.98
TNFRSF1A-213ENST00000540022 IDI1Q13907 227 aa27.45■■□□□ 1.98
TNFRSF1A-213ENST00000540022 CLTCL1P53675 1640 aa27.45■■□□□ 1.98
TNFRSF1A-213ENST00000540022 NCKAP5LQ9HCH0 1330 aa27.43■■□□□ 1.98
TNFRSF1A-213ENST00000540022 SLC52A1Q9NWF4 448 aa27.42■■□□□ 1.98
TNFRSF1A-213ENST00000540022 POLR1AO95602 1720 aaPredicted RBP27.41■■□□□ 1.98
TNFRSF1A-213ENST00000540022 PIK3C2BO00750 1634 aa27.39■■□□□ 1.98
TNFRSF1A-213ENST00000540022 TONSLQ96HA7 1378 aa27.37■■□□□ 1.97
TNFRSF1A-213ENST00000540022 FBXO41Q8TF61 875 aa27.36■■□□□ 1.97
TNFRSF1A-213ENST00000540022 SPATA31E1Q6ZUB1 1445 aa27.36■■□□□ 1.97
TNFRSF1A-213ENST00000540022 CERKQ8TCT0 537 aa27.36■■□□□ 1.97
TNFRSF1A-213ENST00000540022 CHGAP10645 457 aaKnown RBP27.34■■□□□ 1.97
TNFRSF1A-213ENST00000540022 RGL3Q3MIN7 710 aa27.34■■□□□ 1.97
TNFRSF1A-213ENST00000540022 TIMELESSQ9UNS1 1208 aa27.34■■□□□ 1.97
TNFRSF1A-213ENST00000540022 UBR1Q8IWV7 1749 aa27.34■■□□□ 1.97
TNFRSF1A-213ENST00000540022 NEURL4Q96JN8 1562 aa27.34■■□□□ 1.97
TNFRSF1A-213ENST00000540022 ZEB1P37275 1124 aaPredicted RBP27.33■■□□□ 1.97
TNFRSF1A-213ENST00000540022 LTBP4Q8N2S1 1624 aa27.33■■□□□ 1.97
TNFRSF1A-213ENST00000540022 L3MBTL2Q969R5 705 aa27.32■■□□□ 1.96
TNFRSF1A-213ENST00000540022 THEMISQ8N1K5 641 aaPredicted RBP27.31■■□□□ 1.96
TNFRSF1A-213ENST00000540022 ADGRB3O60242 1522 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms