RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 CLSPNQ9HAW4 1339 aa14.33□□□□□ -0.12
MDH1-215ENST00000539945 CFDP1Q9UEE9 299 aaPredicted RBP14.32□□□□□ -0.12
MDH1-215ENST00000539945 HFM1A2PYH4 1435 aa14.32□□□□□ -0.12
MDH1-215ENST00000539945 CDC42BPAQ5VT25 1732 aa14.31□□□□□ -0.12
MDH1-215ENST00000539945 AKNAQ7Z591 1439 aa14.3□□□□□ -0.12
MDH1-215ENST00000539945 DNMT1P26358 1616 aaKnown RBP14.29□□□□□ -0.12
MDH1-215ENST00000539945 CAMSAP2Q08AD1 1489 aa14.29□□□□□ -0.12
MDH1-215ENST00000539945 SGIP1Q9BQI5 828 aa14.29□□□□□ -0.12
MDH1-215ENST00000539945 ZBTB47Q9UFB7 747 aaPredicted RBP14.29□□□□□ -0.12
MDH1-215ENST00000539945 ZNF644Q9H582 1327 aaPredicted RBP14.28□□□□□ -0.12
MDH1-215ENST00000539945 DAPK1P53355 1430 aa14.28□□□□□ -0.12
MDH1-215ENST00000539945 RASEFQ8IZ41 740 aa14.28□□□□□ -0.12
MDH1-215ENST00000539945 ABCC5O15440 1437 aa14.27□□□□□ -0.12
MDH1-215ENST00000539945 NAIPQ13075 1403 aa14.27□□□□□ -0.12
MDH1-215ENST00000539945 IER5LQ5T953 404 aa14.27□□□□□ -0.12
MDH1-215ENST00000539945 LCE2DQ5TA82 110 aaPredicted RBP14.27□□□□□ -0.12
MDH1-215ENST00000539945 TRPC6Q9Y210 931 aa14.27□□□□□ -0.12
MDH1-215ENST00000539945 POTEFA5A3E0 1075 aa14.26□□□□□ -0.13
MDH1-215ENST00000539945 TTLL13PA6NNM8 815 aa14.26□□□□□ -0.13
MDH1-215ENST00000539945 ROCK1Q13464 1354 aa14.26□□□□□ -0.13
MDH1-215ENST00000539945 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.26□□□□□ -0.138e-6■□□□□ 10.5
MDH1-215ENST00000539945 PLCD3Q8N3E9 789 aa14.25□□□□□ -0.13
MDH1-215ENST00000539945 PREX2Q70Z35 1606 aa14.25□□□□□ -0.13
MDH1-215ENST00000539945 GCC2Q8IWJ2 1684 aa14.24□□□□□ -0.13
MDH1-215ENST00000539945 TTC37Q6PGP7 1564 aa14.24□□□□□ -0.13
MDH1-215ENST00000539945 CDC42BPBQ9Y5S2 1711 aa14.23□□□□□ -0.13
MDH1-215ENST00000539945 CHIC2Q9UKJ5 165 aa14.23□□□□□ -0.13
MDH1-215ENST00000539945 ZNF777Q9ULD5 760 aaPredicted RBP14.23□□□□□ -0.13
MDH1-215ENST00000539945 KCNH8Q96L42 1107 aa14.21□□□□□ -0.13
MDH1-215ENST00000539945 RRP7BPQ9NSQ0 103 aa14.21□□□□□ -0.13
MDH1-215ENST00000539945 PCDHB13Q9Y5F0 798 aa14.21□□□□□ -0.13
MDH1-215ENST00000539945 WDR7Q9Y4E6 1490 aa14.21□□□□□ -0.14
MDH1-215ENST00000539945 CROCC2H7BZ55 1655 aa14.21□□□□□ -0.14
MDH1-215ENST00000539945 MYO5CQ9NQX4 1742 aa14.21□□□□□ -0.14
MDH1-215ENST00000539945 TRIM35Q9UPQ4 493 aa14.2□□□□□ -0.14
MDH1-215ENST00000539945 ACIN1Q9UKV3 1341 aaKnown RBP14.2□□□□□ -0.14
MDH1-215ENST00000539945 ARHGEF5Q12774 1597 aa14.2□□□□□ -0.14
MDH1-215ENST00000539945 ADGRL2O95490 1459 aa14.19□□□□□ -0.14
MDH1-215ENST00000539945 COLQQ9Y215 455 aaPredicted RBP14.19□□□□□ -0.14
MDH1-215ENST00000539945 PLCH2O75038 1416 aa14.19□□□□□ -0.14
MDH1-215ENST00000539945 SHANK2Q9UPX8 1470 aa14.18□□□□□ -0.14
MDH1-215ENST00000539945 MAPKBP1O60336 1514 aa14.18□□□□□ -0.14
MDH1-215ENST00000539945 SAMD9LQ8IVG5 1584 aa14.18□□□□□ -0.14
MDH1-215ENST00000539945 ADGBQ8N7X0 1667 aa14.18□□□□□ -0.14
MDH1-215ENST00000539945 MBD5Q9P267 1494 aa14.18□□□□□ -0.14
MDH1-215ENST00000539945 ARHGAP5Q13017 1502 aa14.18□□□□□ -0.14
MDH1-215ENST00000539945 RSPH4AQ5TD94 716 aa14.17□□□□□ -0.14
MDH1-215ENST00000539945 NCOA1Q15788 1441 aa14.17□□□□□ -0.14
MDH1-215ENST00000539945 ASXL2Q76L83 1435 aa14.17□□□□□ -0.14
MDH1-215ENST00000539945 PLEKHH2Q8IVE3 1493 aa14.17□□□□□ -0.14
MDH1-215ENST00000539945 ARAP3Q8WWN8 1544 aa14.17□□□□□ -0.14
MDH1-215ENST00000539945 KIAA1107Q9UPP5 1409 aa14.16□□□□□ -0.14
MDH1-215ENST00000539945 ANKRD30AQ9BXX3 1397 aa14.15□□□□□ -0.14
MDH1-215ENST00000539945 KDM6BO15054 1643 aa14.14□□□□□ -0.15
MDH1-215ENST00000539945 ABCA9Q8IUA7 1624 aa14.14□□□□□ -0.15
MDH1-215ENST00000539945 CCDC141Q6ZP82 1450 aa14.14□□□□□ -0.15
MDH1-215ENST00000539945 C9orf84Q5VXU9 1444 aa14.14□□□□□ -0.15
MDH1-215ENST00000539945 TSPY4P0CV99 314 aa14.14□□□□□ -0.15
MDH1-215ENST00000539945 TSPY10P0CW01 314 aa14.14□□□□□ -0.15
MDH1-215ENST00000539945 HNRNPMP52272 730 aaKnown RBP eCLIP14.14□□□□□ -0.15
MDH1-215ENST00000539945 EFCAB2Q5VUJ9 269 aa14.14□□□□□ -0.15
MDH1-215ENST00000539945 FAM212AQ96EL1 285 aa14.12□□□□□ -0.15
MDH1-215ENST00000539945 RIMBP3CA6NJZ7 1639 aa14.12□□□□□ -0.15
MDH1-215ENST00000539945 RIMBP3BA6NNM3 1639 aa14.12□□□□□ -0.15
MDH1-215ENST00000539945 RIMBP3Q9UFD9 1639 aa14.12□□□□□ -0.15
MDH1-215ENST00000539945 SYCP2Q9BX26 1530 aa14.11□□□□□ -0.15
MDH1-215ENST00000539945 CDAN1Q8IWY9 1227 aa14.1□□□□□ -0.15
MDH1-215ENST00000539945 MAST1Q9Y2H9 1570 aa14.1□□□□□ -0.15
MDH1-215ENST00000539945 PLCG2P16885 1265 aa14.09□□□□□ -0.15
MDH1-215ENST00000539945 SLAIN1Q8ND83 568 aa14.09□□□□□ -0.15
MDH1-215ENST00000539945 ABCC1P33527 1531 aa14.08□□□□□ -0.16
MDH1-215ENST00000539945 ARHGEF12Q9NZN5 1544 aa14.08□□□□□ -0.16
MDH1-215ENST00000539945 TRIM52Q96A61 297 aa14.07□□□□□ -0.16
MDH1-215ENST00000539945 ANKRD50Q9ULJ7 1429 aa14.07□□□□□ -0.16
MDH1-215ENST00000539945 TMEM106CQ9BVX2 250 aa14.07□□□□□ -0.16
MDH1-215ENST00000539945 TIMELESSQ9UNS1 1208 aa14.07□□□□□ -0.16
MDH1-215ENST00000539945 NUBP1P53384 320 aa14.06□□□□□ -0.16
MDH1-215ENST00000539945 CYB5RLQ6IPT4 315 aa14.06□□□□□ -0.16
MDH1-215ENST00000539945 FANCAO15360 1455 aa14.05□□□□□ -0.16
MDH1-215ENST00000539945 IFNL1Q8IU54 200 aa14.05□□□□□ -0.16
MDH1-215ENST00000539945 MPHOSPH9Q99550 1183 aa14.05□□□□□ -0.16
MDH1-215ENST00000539945 KIF15Q9NS87 1388 aa14.05□□□□□ -0.16
MDH1-215ENST00000539945 DENND4BO75064 1496 aaPredicted RBP14.05□□□□□ -0.16
MDH1-215ENST00000539945 PLXNC1O60486 1568 aa14.04□□□□□ -0.16
MDH1-215ENST00000539945 SIN3AQ96ST3 1273 aa14.03□□□□□ -0.16
MDH1-215ENST00000539945 TRAPPC8Q9Y2L5 1435 aa14.02□□□□□ -0.17
MDH1-215ENST00000539945 CD109Q6YHK3 1445 aa14.01□□□□□ -0.17
MDH1-215ENST00000539945 RTEL1-TNFRSF6BF6WH68 1400 aa14□□□□□ -0.17
MDH1-215ENST00000539945 PZPP20742 1482 aa14□□□□□ -0.17
MDH1-215ENST00000539945 NEUROD1Q13562 356 aa13.99□□□□□ -0.17
MDH1-215ENST00000539945 ADGRL1O94910 1474 aa13.99□□□□□ -0.17
MDH1-215ENST00000539945 CFAP74Q9C0B2 1584 aa13.99□□□□□ -0.17
MDH1-215ENST00000539945 ST18O60284 1047 aa13.98□□□□□ -0.17
MDH1-215ENST00000539945 KDM5DQ9BY66 1539 aa13.98□□□□□ -0.17
MDH1-215ENST00000539945 DUOX2Q9NRD8 1548 aa13.98□□□□□ -0.17
MDH1-215ENST00000539945 SCAPERQ9BY12 1400 aa13.97□□□□□ -0.17
MDH1-215ENST00000539945 SNPHO15079 494 aa13.97□□□□□ -0.17
MDH1-215ENST00000539945 AFAP1Q8N556 730 aa13.97□□□□□ -0.17
MDH1-215ENST00000539945 SPAG9O60271 1321 aaKnown RBP13.97□□□□□ -0.17
MDH1-215ENST00000539945 GLI2P10070 1586 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms