RNA–Protein interactions for RNA: ENST00000539744.5

LMNTD1-207, Transcript of lamin tail domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LMNTD1, Length 1,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNTD1-207ENST00000539744 EMILIN3Q9NT22 766 aa9.97□□□□□ -0.81
LMNTD1-207ENST00000539744 THSD4Q6ZMP0 1018 aa9.96□□□□□ -0.81
LMNTD1-207ENST00000539744 ZDHHC16Q969W1 377 aa9.96□□□□□ -0.81
LMNTD1-207ENST00000539744 DDX27Q96GQ7 796 aaKnown RBP9.96□□□□□ -0.81
LMNTD1-207ENST00000539744 MFSD10Q14728 455 aa9.95□□□□□ -0.82
LMNTD1-207ENST00000539744 CADPS2Q86UW7 1296 aa9.93□□□□□ -0.82
LMNTD1-207ENST00000539744 BCANQ96GW7 911 aa9.93□□□□□ -0.82
LMNTD1-207ENST00000539744 MAP3K9P80192 1104 aa9.93□□□□□ -0.82
LMNTD1-207ENST00000539744 MRPL50Q8N5N7 158 aaKnown RBP9.92□□□□□ -0.82
LMNTD1-207ENST00000539744 WNT2BQ93097 391 aa9.92□□□□□ -0.82
LMNTD1-207ENST00000539744 PCDHGA10Q9Y5H3 936 aa9.92□□□□□ -0.82
LMNTD1-207ENST00000539744 COL9A1P20849 921 aa9.89□□□□□ -0.83
LMNTD1-207ENST00000539744 HAP1P54257 671 aaPredicted RBP9.89□□□□□ -0.83
LMNTD1-207ENST00000539744 GOLGA8CPA6NN73 597 aa9.88□□□□□ -0.83
LMNTD1-207ENST00000539744 PROX2Q3B8N5 592 aa9.88□□□□□ -0.83
LMNTD1-207ENST00000539744 IFFO2Q5TF58 517 aa9.88□□□□□ -0.83
LMNTD1-207ENST00000539744 PPP1R3GB7ZBB8 358 aa9.85□□□□□ -0.83
LMNTD1-207ENST00000539744 NBPF3Q9H094 633 aa9.85□□□□□ -0.83
LMNTD1-207ENST00000539744 RABGEF1Q9UJ41 708 aa9.84□□□□□ -0.83
LMNTD1-207ENST00000539744 A0A0G2JS52 829 aa9.82□□□□□ -0.84
LMNTD1-207ENST00000539744 PHF14O94880 888 aa9.82□□□□□ -0.84
LMNTD1-207ENST00000539744 TYW1BQ6NUM6 668 aa9.81□□□□□ -0.84
LMNTD1-207ENST00000539744 TPRNQ4KMQ1 711 aa9.8□□□□□ -0.84
LMNTD1-207ENST00000539744 BCAMP50895 628 aa9.79□□□□□ -0.84
LMNTD1-207ENST00000539744 CAMK2BQ13554 666 aa9.79□□□□□ -0.84
LMNTD1-207ENST00000539744 FBXW7Q969H0 707 aa9.79□□□□□ -0.84
LMNTD1-207ENST00000539744 RGS20O76081 388 aa9.79□□□□□ -0.84
LMNTD1-207ENST00000539744 KIAA1468Q9P260 1216 aa9.79□□□□□ -0.84
LMNTD1-207ENST00000539744 DPYSL4O14531 572 aa9.78□□□□□ -0.84
LMNTD1-207ENST00000539744 C6orf132Q5T0Z8 1188 aa9.78□□□□□ -0.84
LMNTD1-207ENST00000539744 ANKK1Q8NFD2 765 aa9.77□□□□□ -0.85
LMNTD1-207ENST00000539744 ATAD2BQ9ULI0 1458 aa9.77□□□□□ -0.85
LMNTD1-207ENST00000539744 NCAPD3P42695 1498 aa9.76□□□□□ -0.85
LMNTD1-207ENST00000539744 ZFRQ96KR1 1074 aaKnown RBP9.76□□□□□ -0.85
LMNTD1-207ENST00000539744 SOWAHBA6NEL2 793 aa9.75□□□□□ -0.85
LMNTD1-207ENST00000539744 LAPTM4BQ86VI4 370 aa9.75□□□□□ -0.85
LMNTD1-207ENST00000539744 DAXXQ9UER7 740 aaPredicted RBP9.75□□□□□ -0.85
LMNTD1-207ENST00000539744 SEPT9Q9UHD8 586 aaPredicted RBP9.75□□□□□ -0.85
LMNTD1-207ENST00000539744 SMARCA4P51532 1647 aa9.75□□□□□ -0.85
LMNTD1-207ENST00000539744 ITGBL1O95965 494 aaPredicted RBP9.74□□□□□ -0.85
LMNTD1-207ENST00000539744 WBP1LQ9NX94 342 aa9.73□□□□□ -0.85
LMNTD1-207ENST00000539744 DDX12PQ92771 950 aa9.73□□□□□ -0.85
LMNTD1-207ENST00000539744 RBM33Q96EV2 1170 aaKnown RBP9.73□□□□□ -0.85
LMNTD1-207ENST00000539744 EPAS1Q99814 870 aa9.73□□□□□ -0.85
LMNTD1-207ENST00000539744 IRX2Q9BZI1 471 aaPredicted RBP9.73□□□□□ -0.85
LMNTD1-207ENST00000539744 ONECUT3O60422 494 aaPredicted RBP9.72□□□□□ -0.85
LMNTD1-207ENST00000539744 MROH2BQ7Z745 1585 aa9.71□□□□□ -0.86
LMNTD1-207ENST00000539744 TRIM6-TRIM34B2RNG4 842 aa9.7□□□□□ -0.86
LMNTD1-207ENST00000539744 BAZ1AQ9NRL2 1556 aaPredicted RBP9.69□□□□□ -0.86
LMNTD1-207ENST00000539744 TIMELESSQ9UNS1 1208 aa9.69□□□□□ -0.86
LMNTD1-207ENST00000539744 SMARCA2P51531 1590 aa9.69□□□□□ -0.86
LMNTD1-207ENST00000539744 VSIG10Q8N0Z9 540 aa9.68□□□□□ -0.86
LMNTD1-207ENST00000539744 NESP48681 1621 aa9.67□□□□□ -0.86
LMNTD1-207ENST00000539744 BAZ1BQ9UIG0 1483 aaKnown RBP9.67□□□□□ -0.86
LMNTD1-207ENST00000539744 TSR1Q2NL82 804 aaKnown RBP9.67□□□□□ -0.86
LMNTD1-207ENST00000539744 FAM98CQ17RN3 349 aaKnown RBP9.66□□□□□ -0.86
LMNTD1-207ENST00000539744 TSKSQ9UJT2 592 aa9.66□□□□□ -0.86
LMNTD1-207ENST00000539744 ERCC6Q03468 1493 aa9.65□□□□□ -0.87
LMNTD1-207ENST00000539744 NYAP1Q6ZVC0 841 aa9.65□□□□□ -0.87
LMNTD1-207ENST00000539744 HMGXB3Q12766 1538 aa9.64□□□□□ -0.87
LMNTD1-207ENST00000539744 KCNC4Q03721 635 aa9.63□□□□□ -0.87
LMNTD1-207ENST00000539744 EN1Q05925 392 aaPredicted RBP9.63□□□□□ -0.87
LMNTD1-207ENST00000539744 NBR1Q14596 966 aa9.63□□□□□ -0.87
LMNTD1-207ENST00000539744 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.63□□□□□ -0.87
LMNTD1-207ENST00000539744 PRIM1P49642 420 aaKnown RBP9.62□□□□□ -0.87
LMNTD1-207ENST00000539744 TSR3Q9UJK0 312 aaKnown RBP9.62□□□□□ -0.87
LMNTD1-207ENST00000539744 HPS5Q9UPZ3 1129 aa9.62□□□□□ -0.87
LMNTD1-207ENST00000539744 PDIA6Q15084 440 aa9.62□□□□□ -0.87
LMNTD1-207ENST00000539744 FAM198AQ9UFP1 575 aa9.62□□□□□ -0.87
LMNTD1-207ENST00000539744 C3orf80F5H4A9 247 aa9.61□□□□□ -0.87
LMNTD1-207ENST00000539744 TULP1O00294 542 aaPredicted RBP9.61□□□□□ -0.87
LMNTD1-207ENST00000539744 BBXQ8WY36 941 aaPredicted RBP9.61□□□□□ -0.87
LMNTD1-207ENST00000539744 MAP3K7O43318 606 aa9.6□□□□□ -0.87
LMNTD1-207ENST00000539744 LRCH3Q96II8 777 aa9.6□□□□□ -0.87
LMNTD1-207ENST00000539744 KDM2AQ9Y2K7 1162 aa9.6□□□□□ -0.87
LMNTD1-207ENST00000539744 PEG3Q9GZU2 1588 aa9.6□□□□□ -0.87
LMNTD1-207ENST00000539744 SMAPO00193 183 aa9.59□□□□□ -0.87
LMNTD1-207ENST00000539744 WIZO95785 1651 aa9.59□□□□□ -0.87
LMNTD1-207ENST00000539744 PACS2Q86VP3 889 aa9.58□□□□□ -0.88
LMNTD1-207ENST00000539744 CDCA7LQ96GN5 454 aa9.57□□□□□ -0.88
LMNTD1-207ENST00000539744 ARXQ96QS3 562 aa9.56□□□□□ -0.88
LMNTD1-207ENST00000539744 PRSS12P56730 875 aa9.55□□□□□ -0.88
LMNTD1-207ENST00000539744 SAMD7Q7Z3H4 446 aa9.55□□□□□ -0.88
LMNTD1-207ENST00000539744 SPDYE16A6NNV3 312 aaPredicted RBP9.54□□□□□ -0.88
LMNTD1-207ENST00000539744 TJAP1Q5JTD0 557 aa9.54□□□□□ -0.88
LMNTD1-207ENST00000539744 PPP4CP60510 307 aa9.53□□□□□ -0.88
LMNTD1-207ENST00000539744 RSF1Q96T23 1441 aaPredicted RBP9.53□□□□□ -0.88
LMNTD1-207ENST00000539744 GRXCR2A6NFK2 248 aa9.53□□□□□ -0.88
LMNTD1-207ENST00000539744 Q6ZNB5 142 aa9.53□□□□□ -0.88
LMNTD1-207ENST00000539744 CUX2O14529 1486 aa9.53□□□□□ -0.88
LMNTD1-207ENST00000539744 E2F4Q16254 413 aa9.52□□□□□ -0.89
LMNTD1-207ENST00000539744 SPRYD3Q8NCJ5 442 aa9.52□□□□□ -0.89
LMNTD1-207ENST00000539744 LCE2BO14633 110 aa9.51□□□□□ -0.89
LMNTD1-207ENST00000539744 TATDN2Q93075 761 aa9.51□□□□□ -0.89
LMNTD1-207ENST00000539744 CDHR5Q9HBB8 845 aa9.51□□□□□ -0.89
LMNTD1-207ENST00000539744 ARIH1Q9Y4X5 557 aaPredicted RBP9.51□□□□□ -0.89
LMNTD1-207ENST00000539744 CADPSQ9ULU8 1353 aa9.5□□□□□ -0.89
LMNTD1-207ENST00000539744 OSBPP22059 807 aa9.5□□□□□ -0.89
LMNTD1-207ENST00000539744 LAMC3Q9Y6N6 1575 aa9.5□□□□□ -0.89
LMNTD1-207ENST00000539744 PNMA3Q9UL41 463 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms