RNA–Protein interactions for RNA: ENST00000539736.5

C12orf43-208, Transcript of chromosome 12 open reading frame 43, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C12orf43, Length 1,033 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf43-208ENST00000539736 SIGLEC1Q9BZZ2 1709 aa31.78■■■□□ 2.68
C12orf43-208ENST00000539736 UNC13BO14795 1591 aa31.77■■■□□ 2.68
C12orf43-208ENST00000539736 DEPDC5O75140 1603 aa31.77■■■□□ 2.68
C12orf43-208ENST00000539736 RNF17Q9BXT8 1623 aaKnown RBP31.77■■■□□ 2.68
C12orf43-208ENST00000539736 KDM5DQ9BY66 1539 aa31.71■■■□□ 2.67
C12orf43-208ENST00000539736 TRIM52Q96A61 297 aa31.71■■■□□ 2.67
C12orf43-208ENST00000539736 MROH1Q8NDA8 1641 aa31.71■■■□□ 2.67
C12orf43-208ENST00000539736 PRDM15P57071 1507 aaPredicted RBP31.7■■■□□ 2.67
C12orf43-208ENST00000539736 NUP155O75694 1391 aa31.68■■■□□ 2.66
C12orf43-208ENST00000539736 GGT6Q6P531 493 aa31.67■■■□□ 2.66
C12orf43-208ENST00000539736 ARID4BQ4LE39 1312 aaPredicted RBP31.67■■■□□ 2.66
C12orf43-208ENST00000539736 VWDEQ8N2E2 1590 aa31.66■■■□□ 2.66
C12orf43-208ENST00000539736 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.66■■■□□ 2.66
C12orf43-208ENST00000539736 KANK1Q14678 1352 aa31.66■■■□□ 2.66
C12orf43-208ENST00000539736 PPP6R1Q9UPN7 881 aa31.65■■■□□ 2.66
C12orf43-208ENST00000539736 IQGAP3Q86VI3 1631 aa31.64■■■□□ 2.66
C12orf43-208ENST00000539736 PZPP20742 1482 aa31.61■■■□□ 2.65
C12orf43-208ENST00000539736 FAM135AQ9P2D6 1515 aa31.6■■■□□ 2.65
C12orf43-208ENST00000539736 MPHOSPH9Q99550 1183 aa31.58■■■□□ 2.65
C12orf43-208ENST00000539736 LMTK2Q8IWU2 1503 aa31.58■■■□□ 2.65
C12orf43-208ENST00000539736 MLECQ14165 292 aa31.56■■■□□ 2.64
C12orf43-208ENST00000539736 SLC4A1APQ9BWU0 796 aaKnown RBP31.56■■■□□ 2.64
C12orf43-208ENST00000539736 ZC3H13Q5T200 1668 aaKnown RBP31.55■■■□□ 2.64
C12orf43-208ENST00000539736 DHX57Q6P158 1386 aaKnown RBP31.55■■■□□ 2.64
C12orf43-208ENST00000539736 ABCC3O15438 1527 aa31.54■■■□□ 2.64
C12orf43-208ENST00000539736 WASHC2CQ9Y4E1 1318 aa31.54■■■□□ 2.64
C12orf43-208ENST00000539736 TET3O43151 1660 aa31.51■■■□□ 2.64
C12orf43-208ENST00000539736 CEP152O94986 1710 aa31.51■■■□□ 2.63
C12orf43-208ENST00000539736 PKD2Q13563 968 aa31.46■■■□□ 2.63
C12orf43-208ENST00000539736 CNTLNQ9NXG0 1405 aa31.46■■■□□ 2.63
C12orf43-208ENST00000539736 EFCAB6Q5THR3 1501 aa31.45■■■□□ 2.63
C12orf43-208ENST00000539736 ESF1Q9H501 851 aaKnown RBP31.45■■■□□ 2.63
C12orf43-208ENST00000539736 CLTCQ00610 1675 aaKnown RBP31.44■■■□□ 2.62
C12orf43-208ENST00000539736 CAMSAP1Q5T5Y3 1602 aa31.44■■■□□ 2.62
C12orf43-208ENST00000539736 ARHGAP31Q2M1Z3 1444 aa31.43■■■□□ 2.62
C12orf43-208ENST00000539736 ADAMTSL3P82987 1691 aa31.43■■■□□ 2.62
C12orf43-208ENST00000539736 FER1L4A9Z1Z3 1794 aa31.41■■■□□ 2.62
C12orf43-208ENST00000539736 E9PCH4 1651 aa31.41■■■□□ 2.62
C12orf43-208ENST00000539736 RPRD2Q5VT52 1461 aaKnown RBP31.4■■■□□ 2.62
C12orf43-208ENST00000539736 MROH2AA6NES4 1674 aa31.39■■■□□ 2.62
C12orf43-208ENST00000539736 CCER1Q8TC90 406 aaPredicted RBP31.37■■■□□ 2.61
C12orf43-208ENST00000539736 NPATQ14207 1427 aa31.37■■■□□ 2.61
C12orf43-208ENST00000539736 ZMYM3Q14202 1370 aa31.35■■■□□ 2.61
C12orf43-208ENST00000539736 FOXD1Q16676 465 aa31.35■■■□□ 2.61
C12orf43-208ENST00000539736 MADDQ8WXG6 1647 aa31.35■■■□□ 2.61
C12orf43-208ENST00000539736 CLSPNQ9HAW4 1339 aa31.34■■■□□ 2.61
C12orf43-208ENST00000539736 ANKRD30BQ9BXX2 1392 aa31.31■■■□□ 2.6
C12orf43-208ENST00000539736 PTPRTO14522 1441 aa31.3■■■□□ 2.6
C12orf43-208ENST00000539736 RIMS1Q86UR5 1692 aaKnown RBP31.28■■■□□ 2.6
C12orf43-208ENST00000539736 PLA2R1Q13018 1463 aa31.27■■■□□ 2.6
C12orf43-208ENST00000539736 SPHKAPQ2M3C7 1700 aa31.26■■■□□ 2.59
C12orf43-208ENST00000539736 NOS1P29475 1434 aa31.25■■■□□ 2.59
C12orf43-208ENST00000539736 C3P01024 1663 aa31.25■■■□□ 2.59
C12orf43-208ENST00000539736 PREX1Q8TCU6 1659 aa31.24■■■□□ 2.59
C12orf43-208ENST00000539736 ERVK-7P63135 1459 aa31.23■■■□□ 2.59
C12orf43-208ENST00000539736 CFAP65Q6ZU64 1925 aaKnown RBP31.23■■■□□ 2.59
C12orf43-208ENST00000539736 TRPM2O94759 1503 aa31.23■■■□□ 2.59
C12orf43-208ENST00000539736 SPATA31D1Q6ZQQ2 1576 aa31.22■■■□□ 2.59
C12orf43-208ENST00000539736 FBXO31Q5XUX0 539 aaPredicted RBP31.2■■■□□ 2.59
C12orf43-208ENST00000539736 KDM4FA0A1W2PPD8 638 aa31.16■■■□□ 2.58
C12orf43-208ENST00000539736 CEBPAP49715 358 aaPredicted RBP31.16■■■□□ 2.58
C12orf43-208ENST00000539736 SYNMO15061 1565 aa31.16■■■□□ 2.58
C12orf43-208ENST00000539736 PTPRMP28827 1452 aa31.15■■■□□ 2.58
C12orf43-208ENST00000539736 CCDC144AA2RUR9 1427 aa31.15■■■□□ 2.58
C12orf43-208ENST00000539736 SIN3AQ96ST3 1273 aa31.12■■■□□ 2.57
C12orf43-208ENST00000539736 SLC52A1Q9NWF4 448 aa31.12■■■□□ 2.57
C12orf43-208ENST00000539736 PIK3C2BO00750 1634 aa31.1■■■□□ 2.57
C12orf43-208ENST00000539736 CLTCL1P53675 1640 aa31.1■■■□□ 2.57
C12orf43-208ENST00000539736 TNRQ92752 1358 aa31.1■■■□□ 2.57
C12orf43-208ENST00000539736 UGGT1Q9NYU2 1555 aa31.07■■■□□ 2.56
C12orf43-208ENST00000539736 NEUROD1Q13562 356 aa31.05■■■□□ 2.56
C12orf43-208ENST00000539736 IDI1Q13907 227 aa31.04■■■□□ 2.56
C12orf43-208ENST00000539736 PLPPR3Q6T4P5 718 aa31.04■■■□□ 2.56
C12orf43-208ENST00000539736 NLRP1Q9C000 1473 aa31.01■■■□□ 2.55
C12orf43-208ENST00000539736 NEURL4Q96JN8 1562 aa31■■■□□ 2.55
C12orf43-208ENST00000539736 SETD1BQ9UPS6 1966 aaKnown RBP31■■■□□ 2.55
C12orf43-208ENST00000539736 KIF1BO60333 1816 aa31■■■□□ 2.55
C12orf43-208ENST00000539736 SPATA31E1Q6ZUB1 1445 aa30.98■■■□□ 2.55
C12orf43-208ENST00000539736 TIMELESSQ9UNS1 1208 aa30.97■■■□□ 2.55
C12orf43-208ENST00000539736 ADGRB3O60242 1522 aa30.94■■■□□ 2.54
C12orf43-208ENST00000539736 MYO3AQ8NEV4 1616 aa30.94■■■□□ 2.54
C12orf43-208ENST00000539736 TMEM131LA2VDJ0 1609 aa30.93■■■□□ 2.54
C12orf43-208ENST00000539736 KDM5AP29375 1690 aaKnown RBP30.93■■■□□ 2.54
C12orf43-208ENST00000539736 TONSLQ96HA7 1378 aa30.91■■■□□ 2.54
C12orf43-208ENST00000539736 CHGAP10645 457 aaKnown RBP30.9■■■□□ 2.54
C12orf43-208ENST00000539736 A2ML1A8K2U0 1454 aa30.89■■■□□ 2.54
C12orf43-208ENST00000539736 STAG3Q9UJ98 1225 aa30.87■■■□□ 2.53
C12orf43-208ENST00000539736 ZEB1P37275 1124 aaPredicted RBP30.86■■■□□ 2.53
C12orf43-208ENST00000539736 RGL3Q3MIN7 710 aa30.86■■■□□ 2.53
C12orf43-208ENST00000539736 UBR1Q8IWV7 1749 aa30.86■■■□□ 2.53
C12orf43-208ENST00000539736 ZNF142P52746 1687 aaPredicted RBP30.85■■■□□ 2.53
C12orf43-208ENST00000539736 CEP170BQ9Y4F5 1589 aaPredicted RBP30.85■■■□□ 2.53
C12orf43-208ENST00000539736 L3MBTL2Q969R5 705 aa30.85■■■□□ 2.53
C12orf43-208ENST00000539736 MYO5BQ9ULV0 1848 aa30.84■■■□□ 2.53
C12orf43-208ENST00000539736 UHRF1BP1Q6BDS2 1440 aa30.84■■■□□ 2.53
C12orf43-208ENST00000539736 RPGRIP1LQ68CZ1 1315 aa30.83■■■□□ 2.53
C12orf43-208ENST00000539736 ZNF326Q5BKZ1 582 aaKnown RBP30.81■■■□□ 2.52
C12orf43-208ENST00000539736 STAC3Q96MF2 364 aa30.8■■■□□ 2.52
C12orf43-208ENST00000539736 THEMISQ8N1K5 641 aaPredicted RBP30.78■■■□□ 2.52
C12orf43-208ENST00000539736 DCAF11Q8TEB1 546 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms