RNA–Protein interactions for RNA: ENST00000539318.5

NPIPB4-211, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 695 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-211ENST00000539318 GGT6Q6P531 493 aa13.53□□□□□ -0.24
NPIPB4-211ENST00000539318 ANKRD50Q9ULJ7 1429 aa13.53□□□□□ -0.24
NPIPB4-211ENST00000539318 EIF2AK4Q9P2K8 1649 aaKnown RBP13.53□□□□□ -0.24
NPIPB4-211ENST00000539318 NAIPQ13075 1403 aa13.52□□□□□ -0.25
NPIPB4-211ENST00000539318 RNF17Q9BXT8 1623 aaKnown RBP13.5□□□□□ -0.25
NPIPB4-211ENST00000539318 HFM1A2PYH4 1435 aa13.5□□□□□ -0.25
NPIPB4-211ENST00000539318 MROH1Q8NDA8 1641 aa13.5□□□□□ -0.25
NPIPB4-211ENST00000539318 MADDQ8WXG6 1647 aa13.5□□□□□ -0.25
NPIPB4-211ENST00000539318 DEPDC5O75140 1603 aa13.48□□□□□ -0.25
NPIPB4-211ENST00000539318 FER1L4A9Z1Z3 1794 aa13.48□□□□□ -0.25
NPIPB4-211ENST00000539318 KDM5DQ9BY66 1539 aa13.46□□□□□ -0.25
NPIPB4-211ENST00000539318 TRIM26Q12899 539 aaPredicted RBP13.46□□□□□ -0.25
NPIPB4-211ENST00000539318 PTPRMP28827 1452 aa13.46□□□□□ -0.25
NPIPB4-211ENST00000539318 GCC2Q8IWJ2 1684 aa13.46□□□□□ -0.26
NPIPB4-211ENST00000539318 ZMYM3Q14202 1370 aa13.45□□□□□ -0.26
NPIPB4-211ENST00000539318 VWDEQ8N2E2 1590 aa13.45□□□□□ -0.26
NPIPB4-211ENST00000539318 SETD1BQ9UPS6 1966 aaKnown RBP13.45□□□□□ -0.26
NPIPB4-211ENST00000539318 WASHC2CQ9Y4E1 1318 aa13.45□□□□□ -0.26
NPIPB4-211ENST00000539318 RIMS1Q86UR5 1692 aaKnown RBP13.45□□□□□ -0.26
NPIPB4-211ENST00000539318 CNTLNQ9NXG0 1405 aa13.45□□□□□ -0.26
NPIPB4-211ENST00000539318 PRDM15P57071 1507 aaPredicted RBP13.44□□□□□ -0.26
NPIPB4-211ENST00000539318 FAM135AQ9P2D6 1515 aa13.44□□□□□ -0.26
NPIPB4-211ENST00000539318 CEBPAP49715 358 aaPredicted RBP13.44□□□□□ -0.26
NPIPB4-211ENST00000539318 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.44□□□□□ -0.264e-14■■■□□ 17.5
NPIPB4-211ENST00000539318 CLTCQ00610 1675 aaKnown RBP13.44□□□□□ -0.26
NPIPB4-211ENST00000539318 HRCP23327 699 aa13.43□□□□□ -0.26
NPIPB4-211ENST00000539318 SETD5Q9C0A6 1442 aa13.43□□□□□ -0.26
NPIPB4-211ENST00000539318 ESF1Q9H501 851 aaKnown RBP13.43□□□□□ -0.26
NPIPB4-211ENST00000539318 MROH2AA6NES4 1674 aa13.43□□□□□ -0.26
NPIPB4-211ENST00000539318 UNC13BO14795 1591 aa13.42□□□□□ -0.26
NPIPB4-211ENST00000539318 ABCC3O15438 1527 aa13.42□□□□□ -0.26
NPIPB4-211ENST00000539318 CFAP65Q6ZU64 1925 aaKnown RBP13.41□□□□□ -0.26
NPIPB4-211ENST00000539318 C3P01024 1663 aa13.41□□□□□ -0.26
NPIPB4-211ENST00000539318 LMTK2Q8IWU2 1503 aa13.41□□□□□ -0.26
NPIPB4-211ENST00000539318 CEP152O94986 1710 aa13.4□□□□□ -0.26
NPIPB4-211ENST00000539318 PIAS4Q8N2W9 510 aaPredicted RBP13.4□□□□□ -0.26
NPIPB4-211ENST00000539318 NUP155O75694 1391 aa13.4□□□□□ -0.26
NPIPB4-211ENST00000539318 KANK1Q14678 1352 aa13.4□□□□□ -0.26
NPIPB4-211ENST00000539318 ARHGAP31Q2M1Z3 1444 aa13.39□□□□□ -0.27
NPIPB4-211ENST00000539318 FBXO31Q5XUX0 539 aaPredicted RBP13.39□□□□□ -0.27
NPIPB4-211ENST00000539318 ZC3H13Q5T200 1668 aaKnown RBP13.39□□□□□ -0.27
NPIPB4-211ENST00000539318 RAB3GAP2Q9H2M9 1393 aa13.38□□□□□ -0.27
NPIPB4-211ENST00000539318 IQGAP3Q86VI3 1631 aa13.38□□□□□ -0.27
NPIPB4-211ENST00000539318 ACIN1Q9UKV3 1341 aaKnown RBP13.37□□□□□ -0.27
NPIPB4-211ENST00000539318 PZPP20742 1482 aa13.36□□□□□ -0.27
NPIPB4-211ENST00000539318 CAMSAP1Q5T5Y3 1602 aa13.36□□□□□ -0.27
NPIPB4-211ENST00000539318 TET3O43151 1660 aa13.35□□□□□ -0.27
NPIPB4-211ENST00000539318 TRIM52Q96A61 297 aa13.35□□□□□ -0.27
NPIPB4-211ENST00000539318 NPATQ14207 1427 aa13.35□□□□□ -0.27
NPIPB4-211ENST00000539318 EFCAB6Q5THR3 1501 aa13.33□□□□□ -0.28
NPIPB4-211ENST00000539318 E9PCH4 1651 aa13.32□□□□□ -0.28
NPIPB4-211ENST00000539318 MPHOSPH9Q99550 1183 aa13.32□□□□□ -0.28
NPIPB4-211ENST00000539318 SPATA31D1Q6ZQQ2 1576 aa13.32□□□□□ -0.28
NPIPB4-211ENST00000539318 NOS1P29475 1434 aa13.31□□□□□ -0.28
NPIPB4-211ENST00000539318 RPRD2Q5VT52 1461 aaKnown RBP13.31□□□□□ -0.28
NPIPB4-211ENST00000539318 PREX1Q8TCU6 1659 aa13.31□□□□□ -0.28
NPIPB4-211ENST00000539318 ERVK-7P63135 1459 aa13.3□□□□□ -0.28
NPIPB4-211ENST00000539318 PKD2Q13563 968 aa13.3□□□□□ -0.28
NPIPB4-211ENST00000539318 SLC4A1APQ9BWU0 796 aaKnown RBP13.3□□□□□ -0.28
NPIPB4-211ENST00000539318 TNRQ92752 1358 aa13.3□□□□□ -0.28
NPIPB4-211ENST00000539318 PTPRTO14522 1441 aa13.29□□□□□ -0.28
NPIPB4-211ENST00000539318 IDI1Q13907 227 aa13.28□□□□□ -0.28
NPIPB4-211ENST00000539318 PCGF6Q9BYE7 350 aa13.27□□□□□ -0.29
NPIPB4-211ENST00000539318 PLA2R1Q13018 1463 aa13.27□□□□□ -0.29
NPIPB4-211ENST00000539318 SYNMO15061 1565 aa13.26□□□□□ -0.29
NPIPB4-211ENST00000539318 SLC52A1Q9NWF4 448 aa13.26□□□□□ -0.29
NPIPB4-211ENST00000539318 LMTK3Q96Q04 1460 aa13.25□□□□□ -0.29
NPIPB4-211ENST00000539318 NLRP1Q9C000 1473 aa13.24□□□□□ -0.29
NPIPB4-211ENST00000539318 UHRF1BP1Q6BDS2 1440 aa13.24□□□□□ -0.29
NPIPB4-211ENST00000539318 A2ML1A8K2U0 1454 aa13.23□□□□□ -0.29
NPIPB4-211ENST00000539318 MYO3AQ8NEV4 1616 aa13.23□□□□□ -0.29
NPIPB4-211ENST00000539318 SPHKAPQ2M3C7 1700 aa13.22□□□□□ -0.29
NPIPB4-211ENST00000539318 PIK3C2BO00750 1634 aa13.22□□□□□ -0.29
NPIPB4-211ENST00000539318 ZNF142P52746 1687 aaPredicted RBP13.21□□□□□ -0.29
NPIPB4-211ENST00000539318 CEP170BQ9Y4F5 1589 aaPredicted RBP13.21□□□□□ -0.29
NPIPB4-211ENST00000539318 HSPA2P54652 639 aa13.21□□□□□ -0.29
NPIPB4-211ENST00000539318 ANKRD30BQ9BXX2 1392 aa13.2□□□□□ -0.3
NPIPB4-211ENST00000539318 THEMISQ8N1K5 641 aaPredicted RBP13.2□□□□□ -0.3
NPIPB4-211ENST00000539318 UGGT1Q9NYU2 1555 aa13.19□□□□□ -0.3
NPIPB4-211ENST00000539318 UBR1Q8IWV7 1749 aa13.19□□□□□ -0.3
NPIPB4-211ENST00000539318 TRPM2O94759 1503 aa13.18□□□□□ -0.3
NPIPB4-211ENST00000539318 KDM5AP29375 1690 aaKnown RBP13.18□□□□□ -0.3
NPIPB4-211ENST00000539318 MYO5BQ9ULV0 1848 aa13.18□□□□□ -0.3
NPIPB4-211ENST00000539318 TMEM131LA2VDJ0 1609 aa13.17□□□□□ -0.3
NPIPB4-211ENST00000539318 DHX57Q6P158 1386 aaKnown RBP13.17□□□□□ -0.3
NPIPB4-211ENST00000539318 STRCQ7RTU9 1775 aa13.16□□□□□ -0.3
NPIPB4-211ENST00000539318 CLTCL1P53675 1640 aa13.16□□□□□ -0.3
NPIPB4-211ENST00000539318 ARHGAP23Q9P227 1491 aa13.15□□□□□ -0.3
NPIPB4-211ENST00000539318 SLIT1O75093 1534 aa13.13□□□□□ -0.31
NPIPB4-211ENST00000539318 KIF1BO60333 1816 aa13.13□□□□□ -0.31
NPIPB4-211ENST00000539318 TMEM2Q9UHN6 1383 aa13.13□□□□□ -0.31
NPIPB4-211ENST00000539318 LTKP29376 864 aa13.13□□□□□ -0.31
NPIPB4-211ENST00000539318 STAG3Q9UJ98 1225 aa13.13□□□□□ -0.31
NPIPB4-211ENST00000539318 ADGRB3O60242 1522 aa13.13□□□□□ -0.31
NPIPB4-211ENST00000539318 ANKLE2Q86XL3 938 aa13.12□□□□□ -0.31
NPIPB4-211ENST00000539318 CCDC144AA2RUR9 1427 aa13.12□□□□□ -0.31
NPIPB4-211ENST00000539318 SPATA31E1Q6ZUB1 1445 aa13.12□□□□□ -0.31
NPIPB4-211ENST00000539318 NCKAP5LQ9HCH0 1330 aa13.12□□□□□ -0.31
NPIPB4-211ENST00000539318 CHGAP10645 457 aaKnown RBP13.11□□□□□ -0.31
NPIPB4-211ENST00000539318 ZFYVE9O95405 1425 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms